Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39941 Chara braunii HOM05D004444 ORTHO05D005246 0.0e+00 1090.1 559 100.0
Mapoly0012s0022 Marchantia polymorpha HOM05D004444 ORTHO05D005246 1.3e-47 195.3 554 33.6
SEGI_02431 Sequoiadendron giganteum HOM05D004444 ORTHO05D005246 5.5e-43 179.9 550 32.9
Hund21081 Selenicereus undatus HOM05D004444 ORTHO05D005246 2.1e-42 177.9 553 28.6
ATR0810G148 Amborella trichopoda HOM05D004444 ORTHO05D005246 4.4e-40 170.2 552 29.5
Sc19g0000340 Simmondsia chinensis HOM05D004444 ORTHO05D005246 5.7e-40 169.9 552 28.1
Nitab4.5_0005808g0020 Nicotiana tabacum HOM05D004444 ORTHO05D005246 3.7e-39 167.2 557 29.1
Aqoxy5G04401 Aquilegia oxysepala HOM05D004444 ORTHO05D005246 1.8e-38 164.9 554 29.1
EL10Ac3g05121 Beta vulgaris HOM05D004444 ORTHO05D005246 2.4e-38 164.5 550 28.2
GSVIVG01002027001 Vitis vinifera HOM05D004444 ORTHO05D005246 2.4e-38 164.5 552 28.3
Nitab4.5_0003481g0120 Nicotiana tabacum HOM05D004444 ORTHO05D005246 5.3e-38 163.3 551 29.0
Pp3c2_22010 Physcomitrium patens HOM05D004444 ORTHO05D005246 7.0e-38 162.9 549 28.6
Ah.04g157380 Amaranthus hybridus HOM05D004444 ORTHO05D005246 1.2e-37 162.2 551 27.8
Solyc01g096500.3 Solanum lycopersicum HOM05D004444 ORTHO05D005246 4.5e-37 160.2 556 28.8
Sopen01g040230 Solanum pennellii HOM05D004444 ORTHO05D005246 4.5e-37 160.2 556 28.8
CAN.G1045.17 Capsicum annuum HOM05D004444 ORTHO05D005246 7.7e-37 159.5 558 28.9
HanXRQChr11g0343011 Helianthus annuus HOM05D004444 ORTHO05D005246 7.7e-37 159.5 553 29.8
TAR374G0400 Trochodendron aralioides HOM05D004444 ORTHO05D005246 1.0e-36 159.1 550 27.8
ECA248G3474 Erigeron canadensis HOM05D004444 ORTHO05D005246 1.3e-36 158.7 553 29.3
SHI21195 Sapria himalayana HOM05D004444 ORTHO05D005246 1.3e-36 158.7 555 29.7
Lsat_1_v5_gn_1_74220 Lactuca sativa HOM05D004444 ORTHO05D005246 1.7e-36 158.3 551 29.9
Dinv12635 Davidia involucrata HOM05D004444 ORTHO05D005246 2.2e-36 157.9 551 28.7
SMO239G0136 Selaginella moellendorffii HOM05D004444 ORTHO05D005246 2.2e-36 157.9 552 29.3
Peaxi162Scf00082g00116 Petunia axillaris HOM05D004444 ORTHO05D005246 2.9e-36 157.5 556 29.3
Sed0021880 Sechium edule HOM05D004444 ORTHO05D005246 2.9e-36 157.5 556 29.1
SGA_v2.0_scaffold232G43497 Striga asiatica HOM05D004444 ORTHO05D005246 2.9e-36 157.5 556 27.3
THA.LOC104800589 Tarenaya hassleriana HOM05D004444 ORTHO05D005246 3.8e-36 157.1 554 26.7
DCAR_009036 Daucus carota HOM05D004444 ORTHO05D005246 1.1e-35 155.6 553 30.4
Nn3g18734 Nelumbo nucifera HOM05D004444 ORTHO05D005246 1.1e-35 155.6 567 28.4
Duzib132G0849 Durio zibethinus HOM05D004444 ORTHO05D005246 1.9e-35 154.8 556 29.0
HanXRQChr01g0023401 Helianthus annuus HOM05D004444 ORTHO05D005246 1.9e-35 154.8 552 29.9
Duzib052G0576 Durio zibethinus HOM05D004444 ORTHO05D005246 2.5e-35 154.5 554 28.7
Hund09760 Selenicereus undatus HOM05D004444 ORTHO05D005246 2.5e-35 154.5 551 28.5
Migut.N01853 Erythranthe guttata HOM05D004444 ORTHO05D005246 3.2e-35 154.1 127 55.1
Cc02_g29660 Coffea canephora HOM05D004444 ORTHO05D005246 4.2e-35 153.7 549 26.0
Gohir.D12G011700 Gossypium hirsutum HOM05D004444 ORTHO05D005246 4.2e-35 153.7 560 28.0
Gohir.D12G011780 Gossypium hirsutum HOM05D004444 ORTHO05D005246 4.2e-35 153.7 560 28.0
DCAR_020440 Daucus carota HOM05D004444 ORTHO05D005246 5.5e-35 153.3 550 28.0
Os04g0541500 Oryza sativa ssp. japonica HOM05D004444 ORTHO05D005246 5.5e-35 153.3 551 26.3
Haze_17392 Corylus avellana HOM05D004444 ORTHO05D005246 7.2e-35 152.9 555 28.6
Glyma.19G000300 Glycine max HOM05D004444 ORTHO05D005246 7.2e-35 152.9 549 28.2
Gohir.A12G011300 Gossypium hirsutum HOM05D004444 ORTHO05D005246 7.2e-35 152.9 558 28.0
Cfa018662 Carpinus fangiana HOM05D004444 ORTHO05D005246 1.2e-34 152.1 556 28.1
CiPaw.16G000300 Carya illinoinensis HOM05D004444 ORTHO05D005246 1.6e-34 151.8 553 28.2
Cpa.g.sc248.6 Carica papaya HOM05D004444 ORTHO05D005246 2.7e-34 151.0 551 28.1
Os10g0516800 Oryza sativa ssp. japonica HOM05D004444 ORTHO05D005246 2.7e-34 151.0 551 27.6
PSO782G3237 Papaver somniferum HOM05D004444 ORTHO05D005246 2.7e-34 151.0 552 29.7
Sed0005704 Sechium edule HOM05D004444 ORTHO05D005246 2.7e-34 151.0 555 27.6
PSO063G7312 Papaver somniferum HOM05D004444 ORTHO05D005246 3.6e-34 150.6 552 28.3
PGR044G0398 Punica granatum HOM05D004444 ORTHO05D005246 3.6e-34 150.6 561 26.4
CARHR190060 Cardamine hirsuta HOM05D004444 ORTHO05D005246 6.1e-34 149.8 574 26.3
AUR62005937 Chenopodium quinoa HOM05D004444 ORTHO05D005246 6.1e-34 149.8 132 52.3
Glyma.05G000200 Glycine max HOM05D004444 ORTHO05D005246 8.0e-34 149.4 555 27.7
vmacro18720 Vaccinium macrocarpon HOM05D004444 ORTHO05D005246 8.0e-34 149.4 119 56.3
AL6G34740 Arabidopsis lyrata HOM05D004444 ORTHO05D005246 1.0e-33 149.1 554 26.5
Duzib248G0301 Durio zibethinus HOM05D004444 ORTHO05D005246 1.0e-33 149.1 560 27.9
Phvul.004G000500 Phaseolus vulgaris HOM05D004444 ORTHO05D005246 1.0e-33 149.1 549 29.9
FvH4_4g37380 Fragaria vesca HOM05D004444 ORTHO05D005246 1.4e-33 148.7 557 28.2
FAN17G2490 Fragaria x ananassa HOM05D004444 ORTHO05D005246 1.4e-33 148.7 557 28.2
Gorai.008G011700 Gossypium raimondii HOM05D004444 ORTHO05D005246 1.4e-33 148.7 558 27.8
Oeu064128.1 Olea europaea HOM05D004444 ORTHO05D005246 1.4e-33 148.7 118 55.9
Aa31LG11G2870 Aethionema arabicum HOM05D004444 ORTHO05D005246 1.8e-33 148.3 557 26.2
CsaV3_5G029250 Cucumis sativus L. HOM05D004444 ORTHO05D005246 1.8e-33 148.3 557 28.0
Zm00001eb043540 Zea mays HOM05D004444 ORTHO05D005246 1.8e-33 148.3 550 28.4
AUR62028126 Chenopodium quinoa HOM05D004444 ORTHO05D005246 2.3e-33 147.9 131 51.9
MELO3C011776.2 Cucumis melo HOM05D004444 ORTHO05D005246 2.3e-33 147.9 554 27.8
Manes.11G000400 Manihot esculenta HOM05D004444 ORTHO05D005246 2.3e-33 147.9 558 27.6
Thecc.02G151100 Theobroma cacao HOM05D004444 ORTHO05D005246 2.3e-33 147.9 558 27.6
CSS0046171 Camellia sinensis var. sinensis HOM05D004444 ORTHO05D005246 3.0e-33 147.5 549 29.5
HPP92_022710 Vanilla planifolia HOM05D004444 ORTHO05D005246 3.0e-33 147.5 118 53.4
Carub.0006s2125 Capsella rubella HOM05D004444 ORTHO05D005246 4.0e-33 147.1 555 27.0
SalBow6G5617 Salvia bowleyana HOM05D004444 ORTHO05D005246 4.0e-33 147.1 120 53.3
Gorai.012G137000 Gossypium raimondii HOM05D004444 ORTHO05D005246 5.2e-33 146.7 556 26.6
VMungo0464G0300 Vigna mungo HOM05D004444 ORTHO05D005246 6.8e-33 146.4 550 28.0
arahy.Tifrunner.gnm1.ann1.VXL9CA Arachis hypogaea HOM05D004444 ORTHO05D005246 8.8e-33 146.0 119 55.5
Zm00001eb427640 Zea mays HOM05D004444 ORTHO05D005246 8.8e-33 146.0 553 26.9
Ca_04130_v3 Cicer arietinum L. HOM05D004444 ORTHO05D005246 1.2e-32 145.6 550 27.6
ClCG11G012850 Citrullus lanatus HOM05D004444 ORTHO05D005246 1.2e-32 145.6 554 27.4
Lj2g0009416 Lotus japonicus HOM05D004444 ORTHO05D005246 1.2e-32 145.6 549 27.3
AT5G23450 Arabidopsis thaliana HOM05D004444 ORTHO05D005246 1.5e-32 145.2 547 26.1
Gohir.A04G110200 Gossypium hirsutum HOM05D004444 ORTHO05D005246 1.5e-32 145.2 556 26.6
arahy.Tifrunner.gnm1.ann1.U9T50E Arachis hypogaea HOM05D004444 ORTHO05D005246 2.0e-32 144.8 119 54.6
RcHm_v2.0_Chr4g0447291 Rosa chinensis HOM05D004444 ORTHO05D005246 2.6e-32 144.4 556 29.3
Atru.chr11.7 Acer truncatum HOM05D004444 ORTHO05D005246 3.4e-32 144.1 551 28.3
Psat1g052480 Pisum sativum HOM05D004444 ORTHO05D005246 3.4e-32 144.1 549 29.5
QL01p000088 Quercus lobata HOM05D004444 ORTHO05D005246 3.4e-32 144.1 554 28.0
Rhsim02G0256600 Rhododendron simsii HOM05D004444 ORTHO05D005246 3.4e-32 144.1 565 27.4
arahy.Tifrunner.gnm1.ann1.8PY7V8 Arachis hypogaea HOM05D004444 ORTHO05D005246 4.4e-32 143.7 549 29.0
Potri.010G255600 Populus trichocarpa HOM05D004444 ORTHO05D005246 4.4e-32 143.7 560 27.3
BcaNung03855 Brassica carinata HOM05D004444 ORTHO05D005246 5.7e-32 143.3 565 27.4
Thhalv10003687m.g Eutrema salsugineum HOM05D004444 ORTHO05D005246 5.7e-32 143.3 560 27.1
Sp6g34510 Schrenkiella parvula HOM05D004444 ORTHO05D005246 7.5e-32 142.9 553 26.6
TPR.G25204 Trifolium pratense HOM05D004444 ORTHO05D005246 7.5e-32 142.9 550 28.4
MSTRG.5072 Avicennia marina HOM05D004444 ORTHO05D005246 9.8e-32 142.5 549 27.1
Prupe.1G584800 Prunus persica HOM05D004444 ORTHO05D005246 9.8e-32 142.5 556 29.5
Ciclev10014323m.g Citrus clementina HOM05D004444 ORTHO05D005246 1.7e-31 141.7 559 26.8
A02p40960 Brassica napus HOM05D004444 ORTHO05D005246 2.2e-31 141.4 562 26.2
A06p34440 Brassica napus HOM05D004444 ORTHO05D005246 2.8e-31 141.0 559 26.3
BraA06t26373Z Brassica rapa HOM05D004444 ORTHO05D005246 2.8e-31 141.0 559 26.3
THA.LOC104818390 Tarenaya hassleriana HOM05D004444 ORTHO05D005246 2.8e-31 141.0 557 27.6
MD16G1005800 Malus domestica HOM05D004444 ORTHO05D005246 3.7e-31 140.6 127 51.2
Sabra10G0199000 Salix brachista HOM05D004444 ORTHO05D005246 3.7e-31 140.6 559 26.8
C07p44100 Brassica napus HOM05D004444 ORTHO05D005246 6.3e-31 139.8 559 25.9
BolC7t44936H Brassica oleracea HOM05D004444 ORTHO05D005246 6.3e-31 139.8 559 25.9
Medtr6g004070 Medicago truncatula HOM05D004444 ORTHO05D005246 6.3e-31 139.8 550 28.4
Gorai.013G066500 Gossypium raimondii HOM05D004444 ORTHO05D005246 8.3e-31 139.4 557 26.6
MD13G1000100 Malus domestica HOM05D004444 ORTHO05D005246 8.3e-31 139.4 555 27.7
BraA02t09044Z Brassica rapa HOM05D004444 ORTHO05D005246 1.1e-30 139.0 560 26.2
TWI74G0409 Tripterygium wilfordii HOM05D004444 ORTHO05D005246 1.1e-30 139.0 556 26.4
Sp2g23710 Schrenkiella parvula HOM05D004444 ORTHO05D005246 1.4e-30 138.7 560 26.8
TWI77G0180 Tripterygium wilfordii HOM05D004444 ORTHO05D005246 1.8e-30 138.3 553 25.5
CANSAT78G1818 Cannabis sativa HOM05D004444 ORTHO05D005246 2.4e-30 137.9 555 27.2
FAN07G0307 Fragaria x ananassa HOM05D004444 ORTHO05D005246 2.4e-30 137.9 137 47.4
Eucgr.J00322 Eucalyptus grandis HOM05D004444 ORTHO05D005246 3.1e-30 137.5 555 26.7
Gohir.D13G058925 Gossypium hirsutum HOM05D004444 ORTHO05D005246 3.1e-30 137.5 557 26.6
Potri.008G002100 Populus trichocarpa HOM05D004444 ORTHO05D005246 3.1e-30 137.5 555 27.4
BcaNung03734 Brassica carinata HOM05D004444 ORTHO05D005246 5.4e-30 136.7 560 26.1
SGA_v2.0_scaffold43G16290 Striga asiatica HOM05D004444 ORTHO05D005246 5.4e-30 136.7 119 52.9
C02p60850 Brassica napus HOM05D004444 ORTHO05D005246 1.2e-29 135.6 560 25.9
BolC2t12137H Brassica oleracea HOM05D004444 ORTHO05D005246 1.2e-29 135.6 560 25.9
MBI04_g37105_MAGBIO Magnolia biondii HOM05D004444 ORTHO05D005246 1.6e-29 135.2 568 26.8
Oeu013089.1 Olea europaea HOM05D004444 ORTHO05D005246 6.5e-28 129.8 540 26.9
MBI12_g01745_MAGBIO Magnolia biondii HOM05D004444 ORTHO05D005246 5.5e-27 126.7 550 27.8
FAN07G0162 Fragaria x ananassa HOM05D004444 ORTHO05D005246 2.1e-26 124.8 536 27.4
CDE09G0893 Ceratophyllum demersum HOM05D004444 ORTHO05D005246 1.4e-25 122.1 540 25.6
Lju50C3G3 Lonicera japonica HOM05D004444 ORTHO05D005246 2.4e-22 111.3 516 26.9
Zm00001eb172780 Zea mays HOM05D004444 ORTHO05D005246 2.0e-21 108.2 150 38.7
unitig_61.g26367 Utricularia gibba HOM05D004444 ORTHO05D005246 1.7e-20 105.1 91 53.8
Os08g0152700 Oryza sativa ssp. japonica HOM05D004444 ORTHO05D005246 2.9e-20 104.4 121 45.5
CDE11G1250 Ceratophyllum demersum HOM05D004444 ORTHO05D005246 4.7e-18 97.1 80 53.8
TAR375G0344 Trochodendron aralioides HOM05D004444 ORTHO05D005246 6.1e-18 96.7 524 25.0
unitig_61.g26366 Utricularia gibba HOM05D004444 ORTHO05D005246 2.2e-15 88.2 96 47.9
Gohir.D04G150400 Gossypium hirsutum HOM05D004444 ORTHO05D005246 6.3e-15 86.7 84 53.6
Actinidia33639 Actinidia chinensis HOM05D004444 ORTHO05D005246 1.2e-13 82.4 77 53.2
HPP92_008908 Vanilla planifolia HOM05D004444 ORTHO05D005246 1.6e-13 82.0 92 46.7
CDE11G0399 Ceratophyllum demersum HOM05D004444 ORTHO05D005246 3.9e-12 77.4 73 52.1
HPP92_022588 Vanilla planifolia HOM05D004444 ORTHO05D005246 2.5e-11 74.7 71 52.1
Pp3c1_15060 Physcomitrium patens HOM05D004444 ORTHO05D005246 4.3e-11 73.9 109 42.2
CDE05G1825 Ceratophyllum demersum HOM05D004176 ORTHO05D004845 4.4e-08 63.9 104 35.6
Oeu006789.1 Olea europaea HOM05D004444 ORTHO05D005246 2.2e-07 61.6 42 54.8
HPP92_000922 Vanilla planifolia HOM05D004176 ORTHO05D004845 3.7e-07 60.8 127 32.3
Pp3c1_27360 Physcomitrium patens HOM05D004176 ORTHO05D004845 2.4e-06 58.2 108 34.3


User provided reference genes

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