Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39926 Chara braunii HOM05D006478 ORTHO05D008071 3.8e-100 368.2 192 100.0
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 3.7e-15 85.9 186 30.6
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 1.1e-14 84.3 185 30.3
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 3.8e-12 75.9 183 31.7
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 5.0e-12 75.5 186 33.9
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 5.0e-12 75.5 186 33.9
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 3.3e-11 72.8 190 33.2
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 1.6e-10 70.5 190 34.2
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.6e-10 70.5 195 30.8
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 1.6e-10 70.5 190 31.6
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 4.7e-10 68.9 190 31.1
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 6.1e-10 68.6 184 31.5
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 8.0e-10 68.2 191 33.0
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 8.0e-10 68.2 191 33.0
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 8.0e-10 68.2 191 33.0
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 8.0e-10 68.2 184 32.1
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 1.0e-09 67.8 192 30.2
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 1.4e-09 67.4 117 34.2
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 1.4e-09 67.4 190 29.5
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 1.8e-09 67.0 190 30.5
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 2.3e-09 66.6 181 32.6
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 2.3e-09 66.6 181 32.6
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.3e-09 66.6 191 28.8
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 2.3e-09 66.6 190 32.6
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 3.1e-09 66.2 190 32.1
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 3.1e-09 66.2 193 29.5
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 3.1e-09 66.2 193 33.7
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 3.1e-09 66.2 183 30.1
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 4.0e-09 65.9 190 31.6
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 4.0e-09 65.9 186 31.7
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 4.0e-09 65.9 192 30.2
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 5.2e-09 65.5 191 28.8
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 6.8e-09 65.1 193 28.5
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 8.9e-09 64.7 183 30.1
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 8.9e-09 64.7 190 31.1
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.5e-08 63.9 190 31.6
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 1.5e-08 63.9 185 29.7
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 1.5e-08 63.9 185 29.2
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 2.0e-08 63.5 117 34.2
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 2.6e-08 63.2 191 30.4
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.6e-08 63.2 191 27.7
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 4.4e-08 62.4 183 33.3
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 7.5e-08 61.6 185 29.2
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 7.5e-08 61.6 192 29.2
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 2.2e-07 60.1 192 30.7
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 2.2e-07 60.1 185 30.3
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 2.2e-07 60.1 185 29.2
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 2.2e-07 60.1 183 31.1
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 2.2e-07 60.1 185 29.2
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.9e-07 59.7 126 34.9
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 3.7e-07 59.3 192 29.7
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 3.7e-07 59.3 115 34.8
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 3.7e-07 59.3 188 28.2
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 4.9e-07 58.9 186 28.0
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 4.9e-07 58.9 184 30.4
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 6.4e-07 58.5 195 30.3
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 6.4e-07 58.5 124 35.5
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 8.3e-07 58.2 124 34.7
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 8.3e-07 58.2 193 29.5
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 8.3e-07 58.2 197 31.5
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 8.3e-07 58.2 185 30.3
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.1e-06 57.8 185 30.8
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 1.1e-06 57.8 183 26.8
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 1.4e-06 57.4 183 27.3
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 1.9e-06 57.0 192 29.2
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 1.9e-06 57.0 193 29.0
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 2.4e-06 56.6 195 31.3
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 2.4e-06 56.6 175 32.6
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.2e-06 56.2 132 30.3
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 3.2e-06 56.2 193 27.5
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 4.1e-06 55.8 185 28.6
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 4.1e-06 55.8 115 34.8
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 5.4e-06 55.5 124 35.5
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 5.4e-06 55.5 124 32.3
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 9.2e-06 54.7 185 27.6
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 9.2e-06 54.7 183 29.5
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 9.2e-06 54.7 186 25.3


User provided reference genes

Program Settings