Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39748 Chara braunii HOM05D004277 ORTHO05D005148 6.0e-286 987.3 679 100.0
Mapoly0151s0022 Marchantia polymorpha HOM05D004277 ORTHO05D005148 2.8e-41 174.5 435 32.4
Pp3c22_19900 Physcomitrium patens HOM05D004277 ORTHO05D005148 1.5e-39 168.7 477 30.6
AagrBONN_evm.TU.Sc2ySwM_228.3209 Anthoceros agrestis HOM05D004277 ORTHO05D005148 5.0e-38 163.7 410 32.4
Atru.chr1.126 Acer truncatum HOM05D004277 ORTHO05D005148 1.5e-34 152.1 406 31.8
Potri.007G067700 Populus trichocarpa HOM05D004277 ORTHO05D005148 9.7e-34 149.4 488 29.5
ATR0763G037 Amborella trichopoda HOM05D004277 ORTHO05D005148 2.2e-33 148.3 414 30.2
SEGI_33780 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 4.8e-33 147.1 391 33.2
Phvul.003G002100 Phaseolus vulgaris HOM05D004277 ORTHO05D005148 6.3e-33 146.7 407 30.7
Ciclev10007189m.g Citrus clementina HOM05D004277 ORTHO05D005148 1.4e-32 145.6 443 29.1
Glyma.09G284900 Glycine max HOM05D004277 ORTHO05D005148 1.8e-32 145.2 408 32.6
Lalb_Chr18g0046601 Lupinus albus HOM05D004277 ORTHO05D005148 5.3e-32 143.7 417 30.2
TAR626G0647 Trochodendron aralioides HOM05D004277 ORTHO05D005148 6.9e-32 143.3 458 29.0
Zm00001eb224850 Zea mays HOM05D004277 ORTHO05D005148 4.5e-31 140.6 407 31.0
Sabra07G0053700 Salix brachista HOM05D004277 ORTHO05D005148 1.0e-30 139.4 488 28.3
CANSAT80G1893 Cannabis sativa HOM05D004277 ORTHO05D005148 1.3e-30 139.0 411 29.0
TWI38G1370 Tripterygium wilfordii HOM05D004277 ORTHO05D005148 1.7e-30 138.7 466 29.2
Psat6g100160 Pisum sativum HOM05D004277 ORTHO05D005148 2.2e-30 138.3 419 29.8
Lj2g0013005 Lotus japonicus HOM05D004277 ORTHO05D005148 2.9e-30 137.9 414 29.5
Medtr1g038850 Medicago truncatula HOM05D004277 ORTHO05D005148 2.9e-30 137.9 417 28.8
VMungo0251G3136 Vigna mungo HOM05D004277 ORTHO05D005148 3.8e-30 137.5 409 29.6
Aqoxy7G03893 Aquilegia oxysepala HOM05D004277 ORTHO05D005148 1.9e-29 135.2 406 32.0
Gohir.D08G252532 Gossypium hirsutum HOM05D004277 ORTHO05D005148 1.9e-29 135.2 409 29.1
Manes.03G176500 Manihot esculenta HOM05D004277 ORTHO05D005148 3.2e-29 134.4 415 29.6
TPR.G35532 Trifolium pratense HOM05D004277 ORTHO05D005148 1.2e-28 132.5 405 29.4
CSS0042003 Camellia sinensis var. sinensis HOM05D004277 ORTHO05D005148 1.6e-28 132.1 408 30.9
Migut.H01674 Erythranthe guttata HOM05D004277 ORTHO05D005148 1.6e-28 132.1 508 28.3
GSVIVG01036797001 Vitis vinifera HOM05D004277 ORTHO05D005148 1.6e-28 132.1 417 27.6
BcaB05g25178 Brassica carinata HOM05D004277 ORTHO05D005148 2.7e-28 131.3 413 28.3
MELO3C012612.2 Cucumis melo HOM05D004277 ORTHO05D005148 2.7e-28 131.3 425 28.9
Eucgr.F04450 Eucalyptus grandis HOM05D004277 ORTHO05D005148 2.7e-28 131.3 411 28.7
COL.COLO4_05147 Corchorus olitorius HOM05D004277 ORTHO05D004634 3.6e-28 131.0 395 29.4
CiPaw.11G062700 Carya illinoinensis HOM05D004277 ORTHO05D005148 4.7e-28 130.6 406 31.0
Sed0006880 Sechium edule HOM05D004277 ORTHO05D005148 4.7e-28 130.6 424 28.1
CDE05G2591 Ceratophyllum demersum HOM05D004277 ORTHO05D005148 6.1e-28 130.2 411 30.2
Gohir.A08G232300 Gossypium hirsutum HOM05D004277 ORTHO05D005148 1.4e-27 129.0 409 28.9
Lsat_1_v5_gn_7_70840 Lactuca sativa HOM05D004277 ORTHO05D005148 1.4e-27 129.0 409 29.3
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 1.8e-27 128.6 445 27.4
PSO210G0403 Papaver somniferum HOM05D004277 ORTHO05D005148 2.3e-27 128.3 473 28.5
ClCG09G022670 Citrullus lanatus HOM05D004277 ORTHO05D005148 3.0e-27 127.9 425 28.7
arahy.Tifrunner.gnm1.ann1.J7P8I0 Arachis hypogaea HOM05D004277 ORTHO05D005148 5.1e-27 127.1 418 30.1
Aa31LG4G1820 Aethionema arabicum HOM05D004277 ORTHO05D005148 6.7e-27 126.7 427 27.6
Actinidia12771 Actinidia chinensis HOM05D004277 ORTHO05D005148 8.8e-27 126.3 412 28.6
Cc05_g16300 Coffea canephora HOM05D004277 ORTHO05D005148 8.8e-27 126.3 415 28.7
CsaV3_7G022870 Cucumis sativus L. HOM05D004277 ORTHO05D005148 8.8e-27 126.3 425 28.0
THA.LOC104812364 Tarenaya hassleriana HOM05D004277 ORTHO05D005148 1.1e-26 125.9 486 26.7
HanXRQChr03g0078241 Helianthus annuus HOM05D004277 ORTHO05D005148 1.5e-26 125.6 425 28.2
vmacro11705 Vaccinium macrocarpon HOM05D004277 ORTHO05D005148 2.6e-26 124.8 436 28.4
MBI02_g15959_MAGBIO Magnolia biondii HOM05D004277 ORTHO05D005148 7.4e-26 123.2 383 29.0
Oeu019710.1 Olea europaea HOM05D004277 ORTHO05D005148 7.4e-26 123.2 412 29.6
PSO210G1337 Papaver somniferum HOM05D004277 ORTHO05D005148 7.4e-26 123.2 471 27.8
Rhsim06G0241600 Rhododendron simsii HOM05D004277 ORTHO05D005148 7.4e-26 123.2 416 29.8
CARHR072830 Cardamine hirsuta HOM05D004277 ORTHO05D005148 1.3e-25 122.5 425 26.4
SalBow7G4120 Salvia bowleyana HOM05D004277 ORTHO05D005148 1.3e-25 122.5 457 30.2
Nn3g21002 Nelumbo nucifera HOM05D004277 ORTHO05D005148 2.2e-25 121.7 502 28.7
Gorai.004G269300 Gossypium raimondii HOM05D004277 ORTHO05D005148 2.8e-25 121.3 393 28.8
SGA_v2.0_scaffold239G44031 Striga asiatica HOM05D004277 ORTHO05D005148 3.7e-25 120.9 442 29.2
Peaxi162Scf00006g01510 Petunia axillaris HOM05D004277 ORTHO05D005148 4.8e-25 120.6 498 28.9
Sopen12g008100 Solanum pennellii HOM05D004277 ORTHO05D005148 4.8e-25 120.6 417 30.0
Solyc12g017280.2 Solanum lycopersicum HOM05D004277 ORTHO05D005148 1.1e-24 119.4 417 30.0
ECA240G2290 Erigeron canadensis HOM05D004277 ORTHO05D005148 1.4e-24 119.0 399 28.6
Sc06g0002790 Simmondsia chinensis HOM05D004277 ORTHO05D005148 1.4e-24 119.0 404 29.0
FAN11G0660 Fragaria x ananassa HOM05D004277 ORTHO05D005148 3.1e-24 117.9 464 25.2
RcHm_v2.0_Chr5g0025751 Rosa chinensis HOM05D004277 ORTHO05D005148 3.1e-24 117.9 464 25.2
AT1G79190 Arabidopsis thaliana HOM05D004277 ORTHO05D005148 4.1e-24 117.5 423 27.2
Ca_12380_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 5.3e-24 117.1 418 29.2
Peaxi162Scf00078g01336 Petunia axillaris HOM05D004277 ORTHO05D005148 5.3e-24 117.1 489 28.8
AL2G39660 Arabidopsis lyrata HOM05D004277 ORTHO05D005148 7.0e-24 116.7 408 27.0
AUR62006227 Chenopodium quinoa HOM05D004277 ORTHO05D005148 7.0e-24 116.7 420 28.8
Thhalv10018016m.g Eutrema salsugineum HOM05D004277 ORTHO05D005148 7.0e-24 116.7 432 26.4
SEGI_06167 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 7.0e-24 116.7 272 33.8
SEGI_16544 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 9.1e-24 116.3 373 30.8
FAN16G3091 Fragaria x ananassa HOM05D004277 ORTHO05D005148 1.2e-23 115.9 464 25.0
Nitab4.5_0009962g0010 Nicotiana tabacum HOM05D004277 ORTHO05D005148 1.2e-23 115.9 414 29.5
Ca_12388_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 1.6e-23 115.5 418 29.2
FAN21G0666 Fragaria x ananassa HOM05D004277 ORTHO05D005148 2.0e-23 115.2 464 25.0
Carub.0002s2605 Capsella rubella HOM05D004277 ORTHO05D005148 2.6e-23 114.8 422 27.0
FvH4_3g15310 Fragaria vesca HOM05D004277 ORTHO05D005148 5.0e-22 110.5 464 24.8
Haze_07825 Corylus avellana HOM05D004277 ORTHO05D005148 1.1e-21 109.4 413 29.5
Ah.02g131470 Amaranthus hybridus HOM05D004277 ORTHO05D005148 1.9e-21 108.6 407 28.7
MD05G1224200 Malus domestica HOM05D004277 ORTHO05D005148 2.5e-21 108.2 417 27.1
A02p22660 Brassica napus HOM05D004277 ORTHO05D005148 3.6e-20 104.4 413 25.9
BcaC03g15873 Brassica carinata HOM05D004277 ORTHO05D005148 4.7e-20 104.0 413 26.6
BolC2t09641H Brassica oleracea HOM05D004277 ORTHO05D005148 4.7e-20 104.0 413 26.6
BraA02t07267Z Brassica rapa HOM05D004277 ORTHO05D005148 6.1e-20 103.6 413 26.2
EL10Ac2g03265 Beta vulgaris HOM05D004277 ORTHO05D005148 3.0e-19 101.3 352 28.1
C02p36270 Brassica napus HOM05D004277 ORTHO05D005148 3.0e-19 101.3 413 26.4
Prupe.4G136200 Prunus persica HOM05D004277 ORTHO05D005148 2.0e-18 98.6 359 27.0
PGR031G1415 Punica granatum HOM05D004277 ORTHO05D005148 7.5e-18 96.7 421 25.2
Lj2A15G78 Lonicera japonica HOM05D004277 ORTHO05D005148 6.3e-17 93.6 367 26.7
arahy.Tifrunner.gnm1.ann1.3DGA3E Arachis hypogaea HOM05D004277 ORTHO05D005148 2.4e-16 91.7 250 33.6
Dinv19596 Davidia involucrata HOM05D004277 ORTHO05D005148 4.5e-15 87.4 321 28.7
AUR62036983 Chenopodium quinoa HOM05D004277 ORTHO05D005148 3.8e-14 84.3 355 27.0
HPP92_021082 Vanilla planifolia HOM05D004277 ORTHO05D005148 1.8e-11 75.5 161 36.0
Cpa.g.sc34.5 Carica papaya HOM05D004277 ORTHO05D005148 3.4e-10 71.2 267 26.2
unitig_8.g4753 Utricularia gibba HOM05D004277 ORTHO05D005148 2.2e-09 68.6 244 27.0
DCAR_019921 Daucus carota HOM05D004277 ORTHO05D005148 1.6e-07 62.4 361 22.7
PRCOL_00003205 Prasinoderma coloniale HOM05D004277 ORTHO05D005148 4.5e-07 60.8 309 28.2


User provided reference genes

Program Settings