Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39747 Chara braunii HOM05D004277 ORTHO05D005148 0.0e+00 1327.8 690 100.0
Pp3c22_19900 Physcomitrium patens HOM05D004277 ORTHO05D005148 1.6e-55 221.9 697 30.6
Mapoly0151s0022 Marchantia polymorpha HOM05D004277 ORTHO05D005148 5.7e-50 203.4 702 27.4
SEGI_00999 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 7.0e-48 196.4 714 27.5
ATR0763G037 Amborella trichopoda HOM05D004277 ORTHO05D005148 1.2e-42 179.1 729 25.9
Atru.chr1.126 Acer truncatum HOM05D004277 ORTHO05D005148 2.0e-42 178.3 706 25.2
THA.LOC104812364 Tarenaya hassleriana HOM05D004277 ORTHO05D005148 7.5e-42 176.4 676 24.9
Potri.007G067700 Populus trichocarpa HOM05D004277 ORTHO05D005148 3.2e-40 171.0 710 25.5
PGR031G1415 Punica granatum HOM05D004277 ORTHO05D005148 3.2e-40 171.0 668 26.0
CANSAT80G1893 Cannabis sativa HOM05D004277 ORTHO05D005148 5.4e-40 170.2 686 25.2
PSO210G0403 Papaver somniferum HOM05D004277 ORTHO05D005148 5.4e-40 170.2 679 25.0
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 7.0e-40 169.9 709 26.2
Eucgr.F04450 Eucalyptus grandis HOM05D004277 ORTHO05D005148 9.2e-40 169.5 707 26.3
Lj2A15G78 Lonicera japonica HOM05D004277 ORTHO05D005148 1.2e-39 169.1 706 26.2
MCO13G561 Micromonas commoda HOM05D004277 ORTHO05D005148 2.0e-39 168.3 705 27.8
Gohir.D08G252532 Gossypium hirsutum HOM05D004277 ORTHO05D005148 6.0e-39 166.8 713 24.5
Manes.03G176500 Manihot esculenta HOM05D004277 ORTHO05D005148 6.0e-39 166.8 708 25.0
Sc06g0002790 Simmondsia chinensis HOM05D004277 ORTHO05D005148 7.8e-39 166.4 672 25.4
GSVIVG01036797001 Vitis vinifera HOM05D004277 ORTHO05D005148 1.0e-38 166.0 691 26.3
Gohir.A08G232300 Gossypium hirsutum HOM05D004277 ORTHO05D005148 1.3e-38 165.6 708 24.7
Thhalv10018016m.g Eutrema salsugineum HOM05D004277 ORTHO05D005148 1.7e-38 165.2 687 25.3
Gorai.004G269300 Gossypium raimondii HOM05D004277 ORTHO05D005148 1.7e-38 165.2 710 24.2
Sabra07G0053700 Salix brachista HOM05D004277 ORTHO05D005148 2.3e-38 164.9 682 25.5
Aa31LG4G1820 Aethionema arabicum HOM05D004277 ORTHO05D005148 3.9e-38 164.1 657 25.0
CiPaw.11G062700 Carya illinoinensis HOM05D004277 ORTHO05D005148 3.9e-38 164.1 687 25.0
CARHR072840 Cardamine hirsuta HOM05D004277 ORTHO05D005148 6.6e-38 163.3 666 24.3
Aqoxy7G03893 Aquilegia oxysepala HOM05D004277 ORTHO05D005148 1.1e-37 162.5 693 25.4
BcaB05g25178 Brassica carinata HOM05D004277 ORTHO05D005148 1.5e-37 162.2 688 25.0
Sp5g34240 Schrenkiella parvula HOM05D004277 ORTHO05D005148 1.5e-37 162.2 688 25.4
Cc05_g16300 Coffea canephora HOM05D004277 ORTHO05D005148 2.5e-37 161.4 694 26.2
FAN21G0666 Fragaria x ananassa HOM05D004277 ORTHO05D005148 2.5e-37 161.4 712 24.2
COL.COLO4_05147 Corchorus olitorius HOM05D004277 ORTHO05D004634 3.3e-37 161.0 653 25.3
TWI38G1370 Tripterygium wilfordii HOM05D004277 ORTHO05D005148 4.3e-37 160.6 682 24.9
AT1G79190 Arabidopsis thaliana HOM05D004277 ORTHO05D005148 7.3e-37 159.8 558 23.8
PSO210G1337 Papaver somniferum HOM05D004277 ORTHO05D005148 7.3e-37 159.8 679 24.3
AL2G39660 Arabidopsis lyrata HOM05D004277 ORTHO05D005148 1.2e-36 159.1 558 25.1
Carub.0002s2606 Capsella rubella HOM05D004277 ORTHO05D005148 1.2e-36 159.1 685 25.7
Cre01.g039600 Chlamydomonas reinhardtii HOM05D004277 ORTHO05D005148 1.2e-36 159.1 454 30.2
ClCG09G022670 Citrullus lanatus HOM05D004277 ORTHO05D005148 1.6e-36 158.7 675 25.5
ECA240G2290 Erigeron canadensis HOM05D004277 ORTHO05D005148 2.8e-36 157.9 564 25.4
Ah.02g131470 Amaranthus hybridus HOM05D004277 ORTHO05D005148 4.7e-36 157.1 691 25.2
AagrBONN_evm.TU.Sc2ySwM_228.3209 Anthoceros agrestis HOM05D004277 ORTHO05D005148 6.2e-36 156.8 276 37.3
FAN11G0660 Fragaria x ananassa HOM05D004277 ORTHO05D005148 8.1e-36 156.4 709 23.8
FvH4_3g15310 Fragaria vesca HOM05D004277 ORTHO05D005148 1.4e-35 155.6 709 23.7
FAN16G3091 Fragaria x ananassa HOM05D004277 ORTHO05D005148 1.4e-35 155.6 709 23.8
vmacro11705 Vaccinium macrocarpon HOM05D004277 ORTHO05D005148 1.8e-35 155.2 709 26.2
BcaC03g15873 Brassica carinata HOM05D004277 ORTHO05D005148 3.1e-35 154.5 688 24.6
CDE05G2591 Ceratophyllum demersum HOM05D004277 ORTHO05D005148 3.1e-35 154.5 562 25.8
Actinidia12771 Actinidia chinensis HOM05D004277 ORTHO05D005148 5.2e-35 153.7 684 24.4
RcHm_v2.0_Chr5g0025751 Rosa chinensis HOM05D004277 ORTHO05D005148 6.8e-35 153.3 682 24.2
A02p22660 Brassica napus HOM05D004277 ORTHO05D005148 8.9e-35 152.9 562 25.1
BolC2t09641H Brassica oleracea HOM05D004277 ORTHO05D005148 1.5e-34 152.1 690 24.6
BraA02t07267Z Brassica rapa HOM05D004277 ORTHO05D005148 1.5e-34 152.1 691 24.6
Prupe.4G136200 Prunus persica HOM05D004277 ORTHO05D005148 3.4e-34 151.0 681 24.2
Solyc12g017280.2 Solanum lycopersicum HOM05D004277 ORTHO05D005148 3.4e-34 151.0 589 25.5
Ciclev10007189m.g Citrus clementina HOM05D004277 ORTHO05D005148 7.5e-34 149.8 707 25.5
Oeu019710.1 Olea europaea HOM05D004277 ORTHO05D005148 1.7e-33 148.7 677 24.7
HanXRQChr03g0078241 Helianthus annuus HOM05D004277 ORTHO05D005148 2.2e-33 148.3 686 24.5
Nn3g21002 Nelumbo nucifera HOM05D004277 ORTHO05D005148 8.3e-33 146.4 583 24.4
Zm00001eb224850 Zea mays HOM05D004277 ORTHO05D005148 8.3e-33 146.4 711 25.6
C02p36270 Brassica napus HOM05D004277 ORTHO05D005148 1.9e-32 145.2 688 24.3
Lalb_Chr18g0046601 Lupinus albus HOM05D004277 ORTHO05D005148 1.9e-32 145.2 672 23.1
Hma1.2p1_1054F.1_g252470 Hydrangea macrophylla HOM05D004277 ORTHO05D005148 7.1e-32 143.3 611 25.5
EL10Ac2g03265 Beta vulgaris HOM05D004277 ORTHO05D005148 1.6e-31 142.1 654 24.0
CSS0042003 Camellia sinensis var. sinensis HOM05D004277 ORTHO05D005148 1.6e-31 142.1 650 26.0
SGA_v2.0_scaffold239G44031 Striga asiatica HOM05D004277 ORTHO05D005148 3.5e-31 141.0 569 25.3
SalBow7G4120 Salvia bowleyana HOM05D004277 ORTHO05D005148 4.6e-31 140.6 706 24.8
arahy.Tifrunner.gnm1.ann1.3DGA3E Arachis hypogaea HOM05D004277 ORTHO05D005148 7.8e-31 139.8 677 24.2
Lsat_1_v5_gn_7_70840 Lactuca sativa HOM05D004277 ORTHO05D005148 7.8e-31 139.8 568 24.6
DCAR_019921 Daucus carota HOM05D004277 ORTHO05D005148 3.0e-30 137.9 559 26.3
Peaxi162Scf00078g01336 Petunia axillaris HOM05D004277 ORTHO05D005148 3.3e-29 134.4 551 25.4
CsaV3_7G022870 Cucumis sativus L. HOM05D004277 ORTHO05D005148 1.6e-28 132.1 331 29.0
Rhsim06G0241600 Rhododendron simsii HOM05D004277 ORTHO05D005148 6.2e-28 130.2 552 25.7
SEGI_07420 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 8.1e-28 129.8 280 31.4
Haze_07825 Corylus avellana HOM05D004277 ORTHO05D005148 1.4e-27 129.0 298 31.2
Migut.H01674 Erythranthe guttata HOM05D004277 ORTHO05D005148 1.8e-27 128.6 287 31.0
PRCOL_00003205 Prasinoderma coloniale HOM05D004277 ORTHO05D005148 1.8e-27 128.6 583 28.3
Sed0006880 Sechium edule HOM05D004277 ORTHO05D005148 1.8e-27 128.6 340 29.4
arahy.Tifrunner.gnm1.ann1.J7P8I0 Arachis hypogaea HOM05D004277 ORTHO05D005148 3.1e-27 127.9 593 25.1
Glyma.09G284900 Glycine max HOM05D004277 ORTHO05D005148 1.5e-26 125.6 316 27.8
Lj2g0013005 Lotus japonicus HOM05D004277 ORTHO05D005148 1.5e-26 125.6 362 26.8
Psat6g100160 Pisum sativum HOM05D004277 ORTHO05D005148 2.0e-26 125.2 305 27.5
Phvul.003G002100 Phaseolus vulgaris HOM05D004277 ORTHO05D005148 5.8e-26 123.6 311 29.3
Dinv19596 Davidia involucrata HOM05D004277 ORTHO05D005148 7.6e-26 123.2 539 23.2
AUR62036983 Chenopodium quinoa HOM05D004277 ORTHO05D005148 1.7e-25 122.1 551 24.7
Nitab4.5_0009962g0010 Nicotiana tabacum HOM05D004277 ORTHO05D005148 4.9e-25 120.6 259 28.2
Ca_12388_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 1.4e-24 119.0 306 27.8
Peaxi162Scf00006g01510 Petunia axillaris HOM05D004277 ORTHO05D005148 1.9e-24 118.6 295 30.2
AUR62006227 Chenopodium quinoa HOM05D004277 ORTHO05D005148 3.2e-24 117.9 337 28.5
Nitab4.5_0000388g0130 Nicotiana tabacum HOM05D004277 ORTHO05D005148 2.7e-23 114.8 496 25.0
Sopen12g008110 Solanum pennellii HOM05D004277 ORTHO05D005148 4.6e-23 114.0 382 26.7
MD05G1224200 Malus domestica HOM05D004277 ORTHO05D005148 6.0e-23 113.6 305 28.5
unitig_8.g4753 Utricularia gibba HOM05D004277 ORTHO05D005148 1.3e-22 112.5 234 29.1
Ca_12380_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 1.7e-22 112.1 292 28.1
MELO3C025974.2 Cucumis melo HOM05D004277 ORTHO05D005148 1.5e-21 109.0 151 37.7
Medtr1g038850 Medicago truncatula HOM05D004277 ORTHO05D005148 1.2e-20 105.9 301 26.6
VMungo0251G3136 Vigna mungo HOM05D004277 ORTHO05D005148 3.6e-20 104.4 467 24.2
Actinidia09631 Actinidia chinensis HOM05D004277 ORTHO05D005148 2.6e-18 98.2 150 34.0
MELO3C012612.2 Cucumis melo HOM05D004277 ORTHO05D005148 5.8e-18 97.1 331 26.3
MBI02_g15959_MAGBIO Magnolia biondii HOM05D004277 ORTHO05D005148 3.2e-16 91.3 282 27.0
MSTRG.12674 Avicennia marina HOM05D004277 ORTHO05D005148 1.6e-15 89.0 124 35.5
TAR626G1109 Trochodendron aralioides HOM05D004277 ORTHO05D005148 5.1e-14 84.0 425 24.7
Cpa.g.sc34.11 Carica papaya HOM05D004277 ORTHO05D005148 1.1e-11 76.3 335 26.6
Thecc.07G167700 Theobroma cacao HOM05D004277 ORTHO05D005148 1.4e-11 75.9 425 24.0
Haze_07823 Corylus avellana HOM05D004277 ORTHO05D005148 1.8e-11 75.5 265 26.4
MELO3C029569.2 Cucumis melo HOM05D004277 ORTHO05D005148 4.0e-11 74.3 57 52.6
Cc03_g14950 Coffea canephora HOM05D004277 ORTHO05D005148 3.2e-08 64.7 64 43.8
Cc00_g15170 Coffea canephora HOM05D004277 ORTHO05D005148 1.3e-06 59.3 50 48.0


User provided reference genes

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