Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 4.3e-208 728.0 443 100.0
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 4.2e-62 243.0 200 59.5
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 1.6e-61 241.1 200 58.5
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 1.6e-61 241.1 200 58.5
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 1.6e-61 241.1 209 56.9
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 1.6e-61 241.1 200 59.0
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 1.6e-61 241.1 226 55.3
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 2.7e-61 240.4 201 58.2
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 2.7e-61 240.4 198 60.1
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 3.6e-61 240.0 197 61.4
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 3.6e-61 240.0 200 59.0
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 4.6e-61 239.6 200 59.0
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 6.1e-61 239.2 200 58.5
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 6.1e-61 239.2 201 57.7
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 7.9e-61 238.8 200 58.5
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 7.9e-61 238.8 198 59.1
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 1.0e-60 238.4 200 57.5
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 1.0e-60 238.4 241 53.1
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 1.0e-60 238.4 198 57.6
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.4e-60 238.0 199 57.3
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 1.8e-60 237.7 201 58.7
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 2.3e-60 237.3 200 58.5
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 3.0e-60 236.9 196 58.2
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 3.9e-60 236.5 223 56.1
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 3.9e-60 236.5 199 56.8
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 3.9e-60 236.5 200 57.0
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 3.9e-60 236.5 198 59.1
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 5.1e-60 236.1 218 55.5
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 5.1e-60 236.1 219 55.3
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 6.7e-60 235.7 198 57.1
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 6.7e-60 235.7 199 56.8
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 8.8e-60 235.3 200 57.5
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 8.8e-60 235.3 198 57.6
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 1.1e-59 235.0 204 55.9
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 1.1e-59 235.0 233 54.1
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 2.0e-59 234.2 206 54.4
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 2.0e-59 234.2 198 57.1
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 2.0e-59 234.2 200 57.5
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 3.3e-59 233.4 199 57.8
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 4.3e-59 233.0 199 59.3
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 4.3e-59 233.0 200 56.5
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 4.3e-59 233.0 223 55.6
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 4.3e-59 233.0 198 57.6
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 5.7e-59 232.6 200 58.0
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 5.7e-59 232.6 198 56.1
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 7.4e-59 232.3 255 50.2
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 7.4e-59 232.3 254 49.6
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 7.4e-59 232.3 200 56.5
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 7.4e-59 232.3 198 57.6
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 9.7e-59 231.9 198 55.1
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 9.7e-59 231.9 209 55.5
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 1.3e-58 231.5 198 57.1
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 1.3e-58 231.5 226 51.3
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 1.7e-58 231.1 199 58.3
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 1.7e-58 231.1 200 57.5
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 1.7e-58 231.1 200 55.5
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 2.2e-58 230.7 251 50.2
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 2.2e-58 230.7 200 57.5
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 2.8e-58 230.3 200 57.0
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 2.8e-58 230.3 200 57.0
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 2.8e-58 230.3 194 58.8
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 6.3e-58 229.2 206 55.8
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 6.3e-58 229.2 201 56.7
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 1.1e-57 228.4 199 56.3
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 1.1e-57 228.4 200 56.0
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 1.1e-57 228.4 223 54.3
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 1.1e-57 228.4 252 50.0
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 1.1e-57 228.4 209 54.5
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 1.4e-57 228.0 235 53.2
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 1.4e-57 228.0 196 56.1
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 1.8e-57 227.6 226 51.8
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 1.8e-57 227.6 256 48.8
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 1.8e-57 227.6 206 54.4
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 2.4e-57 227.3 196 56.6
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 4.1e-57 226.5 199 55.3
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 4.1e-57 226.5 194 56.7
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 5.3e-57 226.1 194 55.7
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 5.3e-57 226.1 199 56.3
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 5.3e-57 226.1 206 54.4
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 6.9e-57 225.7 230 50.9
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 6.9e-57 225.7 201 55.2
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 9.1e-57 225.3 199 55.3
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 2.6e-56 223.8 232 51.7
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 4.5e-56 223.0 197 54.8
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 5.9e-56 222.6 224 52.7
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 1.7e-55 221.1 198 54.5
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 1.7e-55 221.1 206 52.9
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.7e-55 221.1 199 54.3
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 3.8e-55 219.9 241 49.8
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 5.0e-55 219.5 220 51.8
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 5.0e-55 219.5 200 54.5
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 6.5e-55 219.2 200 54.0
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 1.1e-54 218.4 176 59.7
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 3.2e-54 216.9 176 59.7
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 3.2e-54 216.9 195 53.3
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 4.2e-54 216.5 179 58.7
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 9.4e-54 215.3 198 56.1
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 1.2e-53 214.9 200 55.0
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 1.6e-53 214.5 213 51.2
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 4.7e-53 213.0 205 52.7
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 2.3e-52 210.7 188 56.4
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 3.9e-52 209.9 242 45.9
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 5.1e-52 209.5 200 52.5
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 6.7e-52 209.1 202 53.0
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 2.0e-51 207.6 247 44.9
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 1.3e-50 204.9 203 51.7
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 1.8e-49 201.1 200 52.0
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 2.0e-48 197.6 198 50.5
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.9e-46 191.0 232 45.7
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 8.0e-45 185.7 234 47.0
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 5.3e-41 172.9 148 59.5
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 2.0e-40 171.0 174 52.9
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 9.8e-27 125.6 107 58.9
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 7.2e-22 109.4 196 36.2
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 9.8e-19 99.0 177 32.8
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 8.9e-12 75.9 80 50.0
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 1.0e-07 62.4 67 43.3
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 5.0e-07 60.1 67 41.8


User provided reference genes

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