Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39507 Chara braunii HOM05D049901 ORTHO05D038373 0.0e+00 1602.0 855 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3728 Anthoceros agrestis HOM05D049901 ORTHO05D038373 4.2e-34 151.0 165 43.0
CBR_g46720 Chara braunii HOM05D000953 ORTHO05D000231 8.0e-09 67.0 85 42.4
CBR_g49425 Chara braunii HOM05D000019 ORTHO05D000002 5.2e-08 64.3 156 26.3
Mapoly0001s0264 Marchantia polymorpha HOM05D003642 ORTHO05D004460 6.7e-08 63.9 89 40.4
PRCOL_00001678 Prasinoderma coloniale HOM05D003642 ORTHO05D004460 2.6e-07 62.0 113 36.3
CBR_g39359 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-07 61.6 69 42.0
SGA_v2.0_scaffold147G36369 Striga asiatica HOM05D003642 ORTHO05D004460 9.7e-07 60.1 89 39.3
Mapoly0005s0249 Marchantia polymorpha HOM05D003642 ORTHO05D004460 1.3e-06 59.7 58 50.0
BcaB02g09567 Brassica carinata HOM05D002416 ORTHO05D002554 1.7e-06 59.3 71 38.0
Hund10069 Selenicereus undatus HOM05D002416 ORTHO05D002554 1.7e-06 59.3 71 40.8
CBR_g48194 Chara braunii HOM05D007859 ORTHO05D009320 2.2e-06 58.9 73 47.9
unitig_27.g25084 Utricularia gibba HOM05D002416 ORTHO05D002554 2.2e-06 58.9 82 36.6
CBR_g50379 Chara braunii HOM05D049291 ORTHO05D043950 2.8e-06 58.5 70 45.7
AUR62034783 Chenopodium quinoa HOM05D002416 ORTHO05D002554 2.8e-06 58.5 71 40.8
BcaC01g02378 Brassica carinata HOM05D002416 ORTHO05D002554 3.7e-06 58.2 71 38.0
A06p27960 Brassica napus HOM05D002416 ORTHO05D002554 3.7e-06 58.2 71 38.0
C03p65930 Brassica napus HOM05D002416 ORTHO05D002554 3.7e-06 58.2 71 38.0
BolC3t18851H Brassica oleracea HOM05D002416 ORTHO05D002554 3.7e-06 58.2 71 38.0
BraA06t25736Z Brassica rapa HOM05D002416 ORTHO05D002554 3.7e-06 58.2 71 38.0
AUR62029524 Chenopodium quinoa HOM05D002416 ORTHO05D002554 3.7e-06 58.2 71 40.8
AUR62044407 Chenopodium quinoa HOM05D002416 ORTHO05D002554 3.7e-06 58.2 71 40.8
SMO145G0137 Selaginella moellendorffii HOM05D003642 ORTHO05D004460 3.7e-06 58.2 58 46.6
TWI75G1212 Tripterygium wilfordii HOM05D003642 ORTHO05D004460 3.7e-06 58.2 81 37.0
EL10Ac5g11330 Beta vulgaris HOM05D002416 ORTHO05D002554 4.8e-06 57.8 71 39.4
Carub.0001s0763 Capsella rubella HOM05D003642 ORTHO05D004460 4.8e-06 57.8 75 42.7
Nitab4.5_0002002g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 4.8e-06 57.8 58 51.7
Nitab4.5_0005324g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 4.8e-06 57.8 58 51.7
Carub.0005s1499 Capsella rubella HOM05D002416 ORTHO05D002554 6.3e-06 57.4 71 36.6
PSO384G4986 Papaver somniferum HOM05D003642 ORTHO05D004460 6.3e-06 57.4 112 33.0
Sp5g13210 Schrenkiella parvula HOM05D002416 ORTHO05D002554 6.3e-06 57.4 71 36.6
CAN.G919.22 Capsicum annuum HOM05D003642 ORTHO05D004460 8.2e-06 57.0 58 50.0
CBR_g49970 Chara braunii HOM05D003642 ORTHO05D004460 8.2e-06 57.0 66 42.4
Eucgr.B03871 Eucalyptus grandis HOM05D003642 ORTHO05D004460 8.2e-06 57.0 72 44.4
Manes.14G046400 Manihot esculenta HOM05D002416 ORTHO05D002554 8.2e-06 57.0 71 36.6


User provided reference genes

Program Settings