Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 1.1e-159 566.6 297 100.0
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 5.2e-40 169.1 181 49.2
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.2e-39 167.9 182 46.7
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 4.4e-39 166.0 183 45.9
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 5.7e-39 165.6 185 45.9
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 6.3e-38 162.2 185 48.1
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 1.1e-37 161.4 180 45.6
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 1.1e-37 161.4 185 48.1
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 1.8e-37 160.6 182 47.8
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 2.7e-36 156.8 182 44.0
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 7.7e-36 155.2 180 42.2
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 7.7e-36 155.2 185 43.8
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 1.3e-35 154.5 177 44.1
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 1.7e-35 154.1 180 43.9
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 2.2e-35 153.7 180 45.0
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 2.2e-35 153.7 180 43.9
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 2.9e-35 153.3 179 43.6
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 3.8e-35 152.9 180 43.3
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 1.1e-34 151.4 180 42.8
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 1.5e-34 151.0 182 42.9
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 2.5e-34 150.2 183 43.2
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 4.2e-34 149.4 183 43.2
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 4.2e-34 149.4 180 42.2
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 4.2e-34 149.4 182 44.5
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 4.2e-34 149.4 183 41.5
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 5.5e-34 149.1 185 42.7
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 7.2e-34 148.7 183 42.6
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 7.2e-34 148.7 177 44.6
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 7.2e-34 148.7 184 42.4
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 7.2e-34 148.7 202 41.1
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.2e-33 147.9 183 44.3
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 1.6e-33 147.5 184 42.9
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 2.7e-33 146.7 180 42.8
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 3.6e-33 146.4 184 43.5
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 4.7e-33 146.0 183 42.6
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 4.7e-33 146.0 185 44.9
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 6.1e-33 145.6 183 43.2
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 8.0e-33 145.2 184 42.9
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 8.0e-33 145.2 184 42.9
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 1.0e-32 144.8 183 41.0
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 1.8e-32 144.1 184 45.1
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 2.3e-32 143.7 184 42.9
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 2.3e-32 143.7 183 41.0
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 4.0e-32 142.9 183 41.5
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 4.0e-32 142.9 183 41.5
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 4.0e-32 142.9 184 42.9
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 5.2e-32 142.5 182 43.4
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 5.2e-32 142.5 183 41.5
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 5.2e-32 142.5 182 42.9
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 8.8e-32 141.7 185 42.7
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 8.8e-32 141.7 183 41.5
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 1.2e-31 141.4 183 42.6
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 1.2e-31 141.4 183 41.5
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 1.2e-31 141.4 184 41.8
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 1.2e-31 141.4 184 42.4
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 2.0e-31 140.6 184 42.4
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 2.0e-31 140.6 183 42.1
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 2.0e-31 140.6 183 42.1
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 2.6e-31 140.2 182 44.5
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 2.6e-31 140.2 185 42.7
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 2.6e-31 140.2 182 42.3
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 3.4e-31 139.8 193 42.5
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 3.4e-31 139.8 182 42.9
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 4.4e-31 139.4 183 41.5
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 4.4e-31 139.4 182 41.8
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 4.4e-31 139.4 182 41.8
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 4.4e-31 139.4 182 42.9
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 5.7e-31 139.0 181 40.3
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 5.7e-31 139.0 172 41.3
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 5.7e-31 139.0 183 39.9
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 7.5e-31 138.7 187 40.6
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 7.5e-31 138.7 184 40.8
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 7.5e-31 138.7 184 40.8
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 1.3e-30 137.9 183 41.0
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.3e-30 137.9 181 41.4
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 2.8e-30 136.7 182 42.9
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 2.8e-30 136.7 176 42.0
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 4.8e-30 136.0 183 41.5
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 6.3e-30 135.6 184 40.8
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 6.3e-30 135.6 187 41.2
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 8.3e-30 135.2 182 39.6
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 8.3e-30 135.2 184 41.3
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 8.3e-30 135.2 183 43.2
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 1.1e-29 134.8 183 39.3
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 1.4e-29 134.4 193 38.9
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 1.4e-29 134.4 182 40.7
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 1.8e-29 134.0 157 43.9
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 1.8e-29 134.0 184 40.8
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 1.8e-29 134.0 184 40.2
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 2.4e-29 133.7 183 41.0
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 3.1e-29 133.3 182 39.0
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 5.4e-29 132.5 191 39.8
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 5.4e-29 132.5 191 39.8
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 5.4e-29 132.5 183 39.3
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 5.4e-29 132.5 184 39.1
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 7.0e-29 132.1 182 40.7
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 1.2e-28 131.3 184 38.6
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.0e-28 130.6 203 36.0
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 4.5e-28 129.4 183 39.9
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 7.7e-28 128.6 183 39.9
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 6.6e-27 125.6 206 36.9
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 4.2e-26 122.9 180 38.3
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 4.2e-26 122.9 199 35.7
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 4.7e-25 119.4 182 38.5
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 6.1e-25 119.0 156 38.5
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 1.4e-24 117.9 176 37.5
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 1.2e-23 114.8 157 42.7
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 1.2e-23 114.8 169 37.9
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 7.5e-23 112.1 180 35.6
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 4.9e-22 109.4 180 37.8
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.1e-21 108.2 139 44.6
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 3.5e-20 103.2 279 28.0
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.0e-19 101.7 106 48.1
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 2.3e-19 100.5 181 34.3
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 1.9e-18 97.4 206 32.5
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 2.5e-18 97.1 153 37.9
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 3.3e-18 96.7 148 38.5
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 1.6e-17 94.4 235 32.3
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 5.2e-16 89.4 144 36.1
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 9.8e-15 85.1 181 32.6
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 3.2e-13 80.1 137 35.8
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 9.2e-13 78.6 105 41.0
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 5.6e-10 69.3 100 40.0
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 8.0e-09 65.5 96 39.6
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 3.1e-08 63.5 70 41.4
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 1.2e-07 61.6 145 35.2


User provided reference genes

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