Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39267 Chara braunii HOM05D004451 ORTHO05D005177 1.3e-225 786.2 417 100.0
Mapoly0049s0087 Marchantia polymorpha HOM05D004451 ORTHO05D005177 8.0e-63 245.4 217 65.0
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis HOM05D004451 ORTHO05D005177 9.7e-61 238.4 232 59.1
Pp3c10_9500 Physcomitrium patens HOM05D004451 ORTHO05D005177 3.1e-59 233.4 250 55.6
Pp3c1_21740 Physcomitrium patens HOM05D004451 ORTHO05D005177 3.5e-58 229.9 229 59.0
Pp3c27_4260 Physcomitrium patens HOM05D004451 ORTHO05D005177 1.3e-57 228.0 197 64.0
SEGI_03021 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 8.0e-55 218.8 200 63.5
THA.LOC104819557 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 8.8e-54 215.3 226 54.9
PSO170G0588 Papaver somniferum HOM05D004451 ORTHO05D005177 1.2e-53 214.9 220 59.1
Aqoxy5G01146 Aquilegia oxysepala HOM05D004451 ORTHO05D005177 2.6e-53 213.8 201 61.2
Ciclev10029016m.g Citrus clementina HOM05D004451 ORTHO05D005177 2.6e-53 213.8 204 61.8
CANSAT25G0591 Cannabis sativa HOM05D004451 ORTHO05D005177 3.4e-53 213.4 203 60.1
CANSAT25G2876 Cannabis sativa HOM05D004451 ORTHO05D005177 3.4e-53 213.4 203 60.1
Psat6g219200 Pisum sativum HOM05D004451 ORTHO05D005177 3.4e-53 213.4 196 63.3
Actinidia05493 Actinidia chinensis HOM05D004451 ORTHO05D005177 4.4e-53 213.0 208 59.1
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea HOM05D004451 ORTHO05D005177 4.4e-53 213.0 205 59.5
CsaV3_7G008120 Cucumis sativus L. HOM05D004451 ORTHO05D005177 4.4e-53 213.0 204 61.3
CSS0017890 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 5.7e-53 212.6 203 62.1
CSS0044080 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 5.7e-53 212.6 203 62.1
ClCG02G006310 Citrullus lanatus HOM05D004451 ORTHO05D005177 5.7e-53 212.6 204 60.8
Oeu010397.1 Olea europaea HOM05D004451 ORTHO05D005177 5.7e-53 212.6 204 61.3
PSO210G2671 Papaver somniferum HOM05D004451 ORTHO05D005177 5.7e-53 212.6 220 58.6
RcHm_v2.0_Chr6g0255371 Rosa chinensis HOM05D004451 ORTHO05D005177 5.7e-53 212.6 203 60.1
Thecc.02G107400 Theobroma cacao HOM05D004451 ORTHO05D005177 5.7e-53 212.6 204 60.8
CSS0019678 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 7.5e-53 212.2 205 60.0
Lsat_1_v5_gn_5_114881 Lactuca sativa HOM05D004451 ORTHO05D005177 7.5e-53 212.2 197 61.9
Actinidia00412 Actinidia chinensis HOM05D004451 ORTHO05D005177 9.8e-53 211.8 213 60.1
Gohir.A13G043700 Gossypium hirsutum HOM05D004451 ORTHO05D005177 9.8e-53 211.8 204 60.8
TWI31G0226 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 9.8e-53 211.8 204 60.3
Actinidia17478 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.3e-52 211.5 219 57.5
MELO3C018494.2 Cucumis melo HOM05D004451 ORTHO05D005177 1.3e-52 211.5 204 60.8
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla HOM05D004451 ORTHO05D005177 1.3e-52 211.5 213 58.7
Prupe.8G134600 Prunus persica HOM05D004451 ORTHO05D005177 1.3e-52 211.5 204 59.3
QL11p033916 Quercus lobata HOM05D004451 ORTHO05D005177 1.3e-52 211.5 202 59.9
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea HOM05D004451 ORTHO05D005177 1.7e-52 211.1 229 55.0
Duzib248G1610 Durio zibethinus HOM05D004451 ORTHO05D005177 1.7e-52 211.1 204 60.8
Gohir.D13G042200 Gossypium hirsutum HOM05D004451 ORTHO05D005177 1.7e-52 211.1 204 60.3
Gorai.013G047100 Gossypium raimondii HOM05D004451 ORTHO05D005177 1.7e-52 211.1 204 60.3
Sopen01g049830 Solanum pennellii HOM05D004451 ORTHO05D005177 1.7e-52 211.1 200 59.0
Cc02_g19230 Coffea canephora HOM05D004451 ORTHO05D005177 2.2e-52 210.7 197 60.9
Manes.07G069100 Manihot esculenta HOM05D004451 ORTHO05D005177 2.2e-52 210.7 204 59.8
PGR142G3187 Punica granatum HOM05D004451 ORTHO05D005177 2.2e-52 210.7 199 59.8
SalBow6G6827 Salvia bowleyana HOM05D004451 ORTHO05D005177 2.8e-52 210.3 217 58.5
TAR381G0562 Trochodendron aralioides HOM05D004451 ORTHO05D005177 4.8e-52 209.5 220 56.8
COL.COLO4_32599 Corchorus olitorius HOM05D004451 ORTHO05D005177 6.3e-52 209.1 204 59.3
vmacro19448 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 6.3e-52 209.1 211 58.3
VMungo0720G2723 Vigna mungo HOM05D004451 ORTHO05D005177 6.3e-52 209.1 199 60.3
CiPaw.05G011200 Carya illinoinensis HOM05D004451 ORTHO05D005177 8.3e-52 208.8 231 56.3
Ca_11078_v3 Cicer arietinum L. HOM05D004451 ORTHO05D005177 8.3e-52 208.8 196 61.7
MD10G1096700 Malus domestica HOM05D004451 ORTHO05D005177 8.3e-52 208.8 200 59.0
PGSC0003DMG400025865 Solanum tuberosum HOM05D004451 ORTHO05D005177 8.3e-52 208.8 220 55.0
Lj9C321G12 Lonicera japonica HOM05D004451 ORTHO05D005177 1.1e-51 208.4 213 59.6
Medtr1g107450 Medicago truncatula HOM05D004451 ORTHO05D005177 1.1e-51 208.4 216 58.3
Os06g0638100 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 1.1e-51 208.4 192 60.9
Glyma.10G261800 Glycine max HOM05D004451 ORTHO05D005177 1.4e-51 208.0 196 60.7
Lalb_Chr02g0145321 Lupinus albus HOM05D004451 ORTHO05D005177 1.4e-51 208.0 198 60.1
Solyc01g107640.3 Solanum lycopersicum HOM05D004451 ORTHO05D005177 1.4e-51 208.0 200 58.5
Nn1g04705 Nelumbo nucifera HOM05D004451 ORTHO05D005177 1.8e-51 207.6 190 61.6
Sed0013348 Sechium edule HOM05D004451 ORTHO05D005177 1.8e-51 207.6 237 52.7
Cpa.g.sc106.89 Carica papaya HOM05D004451 ORTHO05D005177 2.4e-51 207.2 217 57.1
Cfa004574 Carpinus fangiana HOM05D004451 ORTHO05D005177 2.4e-51 207.2 222 57.2
Migut.B00385 Erythranthe guttata HOM05D004451 ORTHO05D005177 2.4e-51 207.2 210 58.1
MD05G1088600 Malus domestica HOM05D004451 ORTHO05D005177 2.4e-51 207.2 200 58.5
Nitab4.5_0002815g0090 Nicotiana tabacum HOM05D004451 ORTHO05D005177 2.4e-51 207.2 203 59.1
MSTRG.20184 Avicennia marina HOM05D004451 ORTHO05D005177 3.1e-51 206.8 196 61.2
Haze_10166 Corylus avellana HOM05D004451 ORTHO05D005177 3.1e-51 206.8 219 58.0
Lj5g0008999 Lotus japonicus HOM05D004451 ORTHO05D005177 3.1e-51 206.8 196 60.2
Phvul.007G040300 Phaseolus vulgaris HOM05D004451 ORTHO05D005177 3.1e-51 206.8 199 59.8
ECA234G3549 Erigeron canadensis HOM05D004451 ORTHO05D005177 4.1e-51 206.5 201 59.7
Lalb_Chr06g0165471 Lupinus albus HOM05D004451 ORTHO05D005177 4.1e-51 206.5 203 59.1
GSVIVG01003161001 Vitis vinifera HOM05D004451 ORTHO05D005177 4.1e-51 206.5 211 56.9
BcaC06g36051 Brassica carinata HOM05D004451 ORTHO05D005177 5.4e-51 206.1 222 56.8
HanXRQChr16g0514851 Helianthus annuus HOM05D004451 ORTHO05D005177 5.4e-51 206.1 210 58.1
Manes.10G076300 Manihot esculenta HOM05D004451 ORTHO05D005177 5.4e-51 206.1 192 59.4
Os02g0187600 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 5.4e-51 206.1 197 59.4
Potri.001G300500 Populus trichocarpa HOM05D004451 ORTHO05D005177 5.4e-51 206.1 209 57.4
SGA_v2.0_scaffold32G13039 Striga asiatica HOM05D004451 ORTHO05D005177 5.4e-51 206.1 199 58.8
CDE04G0259 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 7.0e-51 205.7 196 61.2
Oeu018597.1 Olea europaea HOM05D004451 ORTHO05D005177 7.0e-51 205.7 197 60.4
CiPaw.06G169600 Carya illinoinensis HOM05D004451 ORTHO05D005177 9.1e-51 205.3 201 60.2
AUR62039084 Chenopodium quinoa HOM05D004451 ORTHO05D005177 9.1e-51 205.3 189 61.4
Atru.chr5.2587 Acer truncatum HOM05D004451 ORTHO05D005177 1.2e-50 204.9 254 52.0
BolC9t54158H Brassica oleracea HOM05D004451 ORTHO05D005177 1.2e-50 204.9 206 57.8
Thhalv10022775m.g Eutrema salsugineum HOM05D004451 ORTHO05D005177 1.2e-50 204.9 204 57.8
Glyma.20G129100 Glycine max HOM05D004451 ORTHO05D005177 1.6e-50 204.5 199 59.3
Potri.009G096300 Populus trichocarpa HOM05D004451 ORTHO05D005177 1.6e-50 204.5 207 57.5
TWI79G0876 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 1.6e-50 204.5 231 53.7
TAR628G0195 Trochodendron aralioides HOM05D004451 ORTHO05D005177 1.6e-50 204.5 199 59.3
A07p05320 Brassica napus HOM05D004451 ORTHO05D005177 2.0e-50 204.1 216 56.9
C07p08470 Brassica napus HOM05D004451 ORTHO05D005177 2.0e-50 204.1 222 56.3
BolC7t41261H Brassica oleracea HOM05D004451 ORTHO05D005177 2.0e-50 204.1 222 56.3
BraA07t28325Z Brassica rapa HOM05D004451 ORTHO05D005177 2.0e-50 204.1 216 56.9
Zm00001eb206410 Zea mays HOM05D004451 ORTHO05D005177 2.7e-50 203.8 187 62.0
BcaB07g31794 Brassica carinata HOM05D004451 ORTHO05D005177 3.5e-50 203.4 206 57.3
BcaB08g34587 Brassica carinata HOM05D004451 ORTHO05D005177 3.5e-50 203.4 210 57.6
A09p10690 Brassica napus HOM05D004451 ORTHO05D005177 3.5e-50 203.4 206 57.3
C09p12690 Brassica napus HOM05D004451 ORTHO05D005177 3.5e-50 203.4 206 57.8
Nitab4.5_0005392g0030 Nicotiana tabacum HOM05D004451 ORTHO05D005177 3.5e-50 203.4 198 59.1
Rhsim05G0088400 Rhododendron simsii HOM05D004451 ORTHO05D005177 3.5e-50 203.4 217 55.8
Duzib132G0413 Durio zibethinus HOM05D004451 ORTHO05D005177 4.5e-50 203.0 204 59.3
Sed0001090 Sechium edule HOM05D004451 ORTHO05D005177 4.5e-50 203.0 197 59.4
BcaB03g16278 Brassica carinata HOM05D004451 ORTHO05D005177 5.9e-50 202.6 221 54.8
HanXRQChr10g0292341 Helianthus annuus HOM05D004451 ORTHO05D005177 5.9e-50 202.6 194 59.3
Sp3g28570 Schrenkiella parvula HOM05D004451 ORTHO05D005177 7.7e-50 202.2 205 58.0
MSTRG.16716 Avicennia marina HOM05D004451 ORTHO05D005177 1.0e-49 201.8 210 57.1
Gohir.D02G207300 Gossypium hirsutum HOM05D004451 ORTHO05D005177 1.0e-49 201.8 204 58.3
Gorai.005G235200 Gossypium raimondii HOM05D004451 ORTHO05D005177 1.0e-49 201.8 204 58.3
Hund06320 Selenicereus undatus HOM05D004451 ORTHO05D005177 1.3e-49 201.4 198 59.1
THA.LOC104807244 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 1.7e-49 201.1 204 56.9
Carub.0003s2912 Capsella rubella HOM05D004451 ORTHO05D005177 2.9e-49 200.3 206 57.8
Gohir.A03G186500 Gossypium hirsutum HOM05D004451 ORTHO05D005177 2.9e-49 200.3 204 57.8
SGA_v2.0_scaffold225G43078 Striga asiatica HOM05D004451 ORTHO05D005177 2.9e-49 200.3 204 57.8
EL10Ac9g22281 Beta vulgaris HOM05D004451 ORTHO05D005177 5.0e-49 199.5 189 58.7
FvH4_2g05240 Fragaria vesca HOM05D004451 ORTHO05D005177 6.5e-49 199.1 204 57.8
FAN24G2858 Fragaria x ananassa HOM05D004451 ORTHO05D005177 6.5e-49 199.1 204 57.8
Aa31LG8G13140 Aethionema arabicum HOM05D004451 ORTHO05D005177 8.6e-49 198.7 190 60.0
AL3G47010 Arabidopsis lyrata HOM05D004451 ORTHO05D005177 8.6e-49 198.7 206 56.8
AT2G15290 Arabidopsis thaliana HOM05D004451 ORTHO05D005177 8.6e-49 198.7 206 56.8
CARHR105660 Cardamine hirsuta HOM05D004451 ORTHO05D005177 8.6e-49 198.7 200 58.0
AUR62010302 Chenopodium quinoa HOM05D004451 ORTHO05D005177 1.1e-48 198.4 197 58.9
FAN20G1574 Fragaria x ananassa HOM05D004451 ORTHO05D005177 1.1e-48 198.4 218 53.2
Peaxi162Scf00016g02324 Petunia axillaris HOM05D004451 ORTHO05D005177 1.5e-48 198.0 186 60.8
FAN27G3473 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.5e-48 197.2 218 52.8
Nn5g30419 Nelumbo nucifera HOM05D004451 ORTHO05D005177 2.5e-48 197.2 189 58.7
Zm00001eb387350 Zea mays HOM05D004451 ORTHO05D005177 3.2e-48 196.8 188 59.6
DCAR_001641 Daucus carota HOM05D004451 ORTHO05D005177 5.5e-48 196.1 191 57.6
Rhsim11G0160300 Rhododendron simsii HOM05D004451 ORTHO05D005177 5.5e-48 196.1 194 58.8
unitig_22.g5194 Utricularia gibba HOM05D004451 ORTHO05D005177 7.2e-48 195.7 202 54.0
HPP92_004770 Vanilla planifolia HOM05D004451 ORTHO05D005177 9.5e-48 195.3 215 53.0
Ah.01g018220 Amaranthus hybridus HOM05D004451 ORTHO05D005177 2.8e-47 193.7 180 57.8
BcaC06g31580 Brassica carinata HOM05D004451 ORTHO05D005177 2.3e-46 190.7 197 58.4
FAN15G2242 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.3e-46 190.7 230 50.9
Hund00148 Selenicereus undatus HOM05D004451 ORTHO05D005177 6.8e-46 189.1 200 54.5
unitig_8.g3679 Utricularia gibba HOM05D004451 ORTHO05D005177 4.1e-43 179.9 191 51.8
ECA240G4367 Erigeron canadensis HOM05D004451 ORTHO05D005177 5.4e-43 179.5 179 59.2
Sabra09G0074000 Salix brachista HOM05D004451 ORTHO05D005177 5.4e-43 179.5 261 45.2
Dinv15761 Davidia involucrata HOM05D004451 ORTHO05D005177 1.2e-42 178.3 194 54.6
Sc17g0003020 Simmondsia chinensis HOM05D004451 ORTHO05D005177 1.2e-42 178.3 187 58.3
Eucgr.E02954 Eucalyptus grandis HOM05D004451 ORTHO05D005177 2.7e-42 177.2 217 52.1
Sabra16G0188700 Salix brachista HOM05D004451 ORTHO05D005177 5.9e-42 176.0 272 43.4
SMO118G0560 Selaginella moellendorffii HOM05D004451 ORTHO05D005177 1.0e-41 175.3 179 53.6
ATR0691G207 Amborella trichopoda HOM05D004451 ORTHO05D005177 1.3e-41 174.9 182 55.5
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 5.0e-41 172.9 166 59.0
DCAR_021989 Daucus carota HOM05D004451 ORTHO05D005177 1.2e-39 168.3 177 56.5
BraA09t36712Z Brassica rapa HOM05D004451 ORTHO05D005177 6.1e-39 166.0 270 42.6
CBR_g28866 Chara braunii HOM05D004451 ORTHO05D005177 3.4e-37 160.2 91 93.4
CBR_g28861 Chara braunii HOM05D004451 ORTHO05D009492 7.0e-35 152.5 87 95.4
vmacro19524 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 3.0e-33 147.1 233 43.3
SHI05289 Sapria himalayana HOM05D004451 ORTHO05D005177 1.9e-27 127.9 190 40.0
MCO10G127 Micromonas commoda HOM05D004451 ORTHO05D005177 2.4e-27 127.5 203 42.9
TAR381G0937 Trochodendron aralioides HOM05D004451 ORTHO05D005177 2.0e-26 124.4 104 67.3
CDE06G1648 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 3.5e-26 123.6 118 57.6
Cre10.g454734 Chlamydomonas reinhardtii HOM05D000133 ORTHO05D005177 8.1e-23 112.5 188 39.9
PRCOL_00004645 Prasinoderma coloniale HOM05D004451 ORTHO05D005177 4.0e-22 110.2 215 39.1
vmacro02006 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 4.0e-22 110.2 189 41.3
Zm00001eb234680 Zea mays HOM05D004451 ORTHO05D005177 3.7e-20 103.6 199 38.2
SEGI_11302 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 5.4e-19 99.8 105 56.2
CAN.G1231.10 Capsicum annuum HOM05D004451 ORTHO05D005177 1.9e-16 91.3 87 56.3
Cre11.g467759 Chlamydomonas reinhardtii HOM05D027551 ORTHO05D005177 1.6e-15 88.2 213 35.2
CAN.G3385.1 Capsicum annuum HOM05D004451 ORTHO05D005177 8.4e-12 75.9 80 58.8
HPP92_008279 Vanilla planifolia HOM05D004451 ORTHO05D005177 4.1e-11 73.6 93 51.6
HanXRQChr01g0018911 Helianthus annuus HOM05D004451 ORTHO05D005177 1.2e-07 62.0 65 56.9
HanXRQChr17g0567381 Helianthus annuus HOM05D004451 ORTHO05D005177 3.6e-07 60.5 65 55.4


User provided reference genes

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