Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 2.7e-144 515.4 268 100.0
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.0e-18 98.2 85 54.1
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 3.4e-14 83.2 80 50.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 9.8e-14 81.6 112 39.3
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 2.8e-13 80.1 89 43.8
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 1.1e-12 78.2 123 39.0
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.8e-12 77.4 87 46.0
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 2.4e-12 77.0 98 41.8
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 7.0e-12 75.5 80 43.8
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 9.2e-12 75.1 85 42.4
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.2e-11 74.7 80 43.8
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.6e-11 74.3 113 37.2
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.6e-11 74.3 114 38.6
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.6e-11 74.3 84 41.7
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 2.7e-11 73.6 90 38.9
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-11 73.6 111 38.7
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 2.7e-11 73.6 120 35.0
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 2.7e-11 73.6 84 42.9
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 2.7e-11 73.6 117 35.9
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 3.5e-11 73.2 80 42.5
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 3.5e-11 73.2 116 37.1
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 4.5e-11 72.8 102 41.2
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 4.5e-11 72.8 80 42.5
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.9e-11 72.4 114 35.1
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 5.9e-11 72.4 112 39.3
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 7.8e-11 72.0 84 41.7
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 1.0e-10 71.6 80 41.2
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 1.0e-10 71.6 80 41.2
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.0e-10 71.6 80 41.2
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.0e-10 71.6 80 41.2
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 1.0e-10 71.6 80 41.2
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.0e-10 71.6 82 41.5
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.3e-10 71.2 101 39.6
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.7e-10 70.9 113 37.2
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.7e-10 70.9 80 41.2
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 2.3e-10 70.5 82 40.2
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.9e-10 70.1 91 36.3
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.9e-10 70.1 91 36.3
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 3.9e-10 69.7 90 36.7
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.9e-10 69.7 114 34.2
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 3.9e-10 69.7 117 35.0
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.0e-10 69.3 80 42.5
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 5.0e-10 69.3 80 42.5
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 5.0e-10 69.3 112 34.8
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 5.0e-10 69.3 112 37.5
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 6.6e-10 68.9 80 40.0
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 6.6e-10 68.9 80 40.0
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 6.6e-10 68.9 102 36.3
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 8.6e-10 68.6 88 38.6
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 8.6e-10 68.6 107 40.2
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.1e-09 68.2 118 31.4
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.1e-09 68.2 112 37.5
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.1e-09 68.2 101 35.6
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.5e-09 67.8 96 39.6
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.5e-09 67.8 80 41.2
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.9e-09 67.4 110 36.4
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.9e-09 67.4 97 37.1
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.5e-09 67.0 83 41.0
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 2.5e-09 67.0 98 37.8
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-09 66.6 112 33.9
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-09 66.6 112 33.9
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 3.3e-09 66.6 104 35.6
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.3e-09 66.6 80 40.0
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.3e-09 66.6 106 37.7
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 4.3e-09 66.2 118 36.4
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 4.3e-09 66.2 107 34.6
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 4.3e-09 66.2 107 34.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 4.3e-09 66.2 100 39.0
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.6e-09 65.9 113 38.1
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 5.6e-09 65.9 100 37.0
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 5.6e-09 65.9 85 37.6
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 5.6e-09 65.9 99 35.4
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 5.6e-09 65.9 107 38.3
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 7.3e-09 65.5 90 36.7
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 7.3e-09 65.5 80 40.0
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 7.3e-09 65.5 67 44.8
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 7.3e-09 65.5 95 38.9
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 7.3e-09 65.5 111 36.0
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 7.3e-09 65.5 90 36.7
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.5e-09 65.1 80 38.8
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 9.5e-09 65.1 78 42.3
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.2e-08 64.7 110 32.7
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.2e-08 64.7 117 35.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 1.2e-08 64.7 96 38.5
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.2e-08 64.7 96 38.5
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.6e-08 64.3 90 33.3
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.6e-08 64.3 106 36.8
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.6e-08 64.3 96 38.5
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 2.1e-08 63.9 79 39.2
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 2.1e-08 63.9 106 36.8
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 2.1e-08 63.9 80 41.2
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 2.1e-08 63.9 82 40.2
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.1e-08 63.9 110 32.7
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 2.1e-08 63.9 97 34.0
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.8e-08 63.5 103 33.0
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 2.8e-08 63.5 112 34.8
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 2.8e-08 63.5 112 31.2
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.8e-08 63.5 99 35.4
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.8e-08 63.5 99 35.4
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 3.6e-08 63.2 105 34.3
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 6.1e-08 62.4 106 32.1
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 6.1e-08 62.4 103 31.1
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 8.0e-08 62.0 99 37.4
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 8.0e-08 62.0 80 38.8
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 8.0e-08 62.0 108 32.4
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.4e-07 61.2 103 32.0
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.8e-07 60.8 117 35.9
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.8e-07 60.8 95 36.8
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.8e-07 60.8 116 37.9
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.8e-07 60.8 103 31.1
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 2.3e-07 60.5 82 36.6
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 4.0e-07 59.7 102 30.4
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 4.0e-07 59.7 83 33.7
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 5.2e-07 59.3 82 35.4
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 5.2e-07 59.3 108 31.5
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 8.9e-07 58.5 98 32.7
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 2.0e-06 57.4 108 33.3


User provided reference genes

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