Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 4.3e-74 281.2 137 100.0
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 4.7e-36 154.8 100 70.0
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 2.3e-35 152.5 98 70.4
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 2.6e-34 149.1 98 72.4
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 3.3e-34 148.7 101 66.3
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 5.7e-34 147.9 101 66.3
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 5.7e-34 147.9 100 67.0
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 5.7e-34 147.9 101 67.3
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 7.4e-34 147.5 100 69.0
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 7.4e-34 147.5 101 66.3
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 7.4e-34 147.5 100 66.0
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 7.4e-34 147.5 100 66.0
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.3e-33 146.7 99 69.7
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 2.2e-33 146.0 99 69.7
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 2.8e-33 145.6 101 65.3
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 2.8e-33 145.6 99 66.7
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 3.7e-33 145.2 101 65.3
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 3.7e-33 145.2 101 64.4
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 4.8e-33 144.8 99 67.7
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 4.8e-33 144.8 99 66.7
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 4.8e-33 144.8 99 66.7
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 4.8e-33 144.8 99 65.7
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 4.8e-33 144.8 101 64.4
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 4.8e-33 144.8 99 67.7
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 6.3e-33 144.4 101 64.4
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 6.3e-33 144.4 99 66.7
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 8.2e-33 144.1 100 67.0
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 8.2e-33 144.1 101 66.3
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 1.1e-32 143.7 99 67.7
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 1.1e-32 143.7 98 67.3
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.1e-32 143.7 99 66.7
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 1.4e-32 143.3 99 64.6
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 1.4e-32 143.3 100 66.0
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 1.4e-32 143.3 98 66.3
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 1.4e-32 143.3 99 65.7
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 1.4e-32 143.3 99 64.6
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 1.4e-32 143.3 101 63.4
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 1.8e-32 142.9 100 65.0
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 1.8e-32 142.9 98 69.4
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 1.8e-32 142.9 98 69.4
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 1.8e-32 142.9 99 67.7
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 1.8e-32 142.9 100 64.0
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 1.8e-32 142.9 101 64.4
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 1.8e-32 142.9 101 64.4
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 1.8e-32 142.9 99 64.6
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 2.4e-32 142.5 99 67.7
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.4e-32 142.5 101 64.4
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 2.4e-32 142.5 99 63.6
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 3.1e-32 142.1 100 64.0
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 3.1e-32 142.1 99 66.7
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 4.1e-32 141.7 98 66.3
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 4.1e-32 141.7 99 64.6
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 4.1e-32 141.7 99 63.6
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 5.3e-32 141.4 100 65.0
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 7.0e-32 141.0 99 65.7
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 7.0e-32 141.0 99 64.6
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 7.0e-32 141.0 98 65.3
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 9.1e-32 140.6 100 64.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 9.1e-32 140.6 99 66.7
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 9.1e-32 140.6 99 65.7
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 9.1e-32 140.6 99 66.7
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 9.1e-32 140.6 101 64.4
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 9.1e-32 140.6 99 63.6
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 1.2e-31 140.2 99 65.7
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 1.5e-31 139.8 99 66.7
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 2.0e-31 139.4 100 62.0
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 2.0e-31 139.4 100 62.0
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.0e-31 139.4 101 63.4
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 2.6e-31 139.0 99 64.6
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 2.6e-31 139.0 99 64.6
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 3.5e-31 138.7 99 61.6
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 3.5e-31 138.7 101 63.4
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 4.5e-31 138.3 99 64.6
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 5.9e-31 137.9 99 62.6
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 7.7e-31 137.5 98 65.3
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 7.7e-31 137.5 101 61.4
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 7.7e-31 137.5 99 64.6
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 1.3e-30 136.7 101 62.4
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 1.7e-30 136.3 100 65.0
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 1.7e-30 136.3 100 64.0
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 2.9e-30 135.6 101 61.4
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 2.9e-30 135.6 101 61.4
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 2.9e-30 135.6 101 61.4
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 2.9e-30 135.6 101 61.4
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 3.8e-30 135.2 101 61.4
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 3.8e-30 135.2 101 61.4
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 3.8e-30 135.2 101 61.4
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 3.8e-30 135.2 99 63.6
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 3.8e-30 135.2 100 63.0
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 5.0e-30 134.8 101 60.4
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 5.0e-30 134.8 101 61.4
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 6.5e-30 134.4 98 63.3
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 8.5e-30 134.0 101 60.4
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 1.1e-29 133.7 99 63.6
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 1.4e-29 133.3 98 62.2
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 1.9e-29 132.9 99 64.6
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 1.9e-29 132.9 98 65.3
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 2.5e-29 132.5 101 61.4
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 3.2e-29 132.1 99 62.6
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 3.2e-29 132.1 94 66.0
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 4.2e-29 131.7 99 63.6
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 4.7e-28 128.3 106 57.5
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 4.7e-28 128.3 94 63.8
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 4.7e-28 128.3 99 61.6
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 6.1e-28 127.9 98 62.2
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 6.7e-27 124.4 105 58.1
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 9.7e-26 120.6 75 74.7
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 4.8e-25 118.2 83 66.3
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 5.3e-24 114.8 77 68.8
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 1.0e-22 110.5 74 70.3
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 1.3e-22 110.2 135 45.9
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 2.2e-22 109.4 71 73.2
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 2.9e-22 109.0 98 56.1
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.2e-21 105.5 64 76.6
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 2.8e-17 92.4 101 48.5
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 4.8e-17 91.7 98 44.9
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 7.7e-15 84.3 99 49.5
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 1.1e-08 63.9 43 69.8


User provided reference genes

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