Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39002 Chara braunii HOM05D021891 ORTHO05D024944 1.1e-31 139.4 74 100.0
CBR_g38998 Chara braunii HOM05D021891 ORTHO05D024944 7.1e-31 136.7 74 98.6
CBR_g38999 Chara braunii HOM05D021891 ORTHO05D024944 7.1e-31 136.7 74 98.6
CBR_g51069 Chara braunii HOM05D021891 ORTHO05D024944 7.1e-31 136.7 74 98.6
CBR_g39008 Chara braunii HOM05D021891 ORTHO05D024944 5.1e-21 104.0 73 71.2
Mapoly0009s0168 Marchantia polymorpha HOM05D001276 ORTHO05D001085 1.0e-08 63.2 68 48.5
Migut.M01692 Erythranthe guttata HOM05D001276 ORTHO05D001085 4.9e-08 60.8 70 45.7
TWI32G0332 Tripterygium wilfordii HOM05D001276 ORTHO05D001085 4.9e-08 60.8 71 49.3
Manes.03G055600 Manihot esculenta HOM05D001276 ORTHO05D001085 6.5e-08 60.5 67 44.8
SMO364G0012 Selaginella moellendorffii HOM05D001276 ORTHO05D001085 6.5e-08 60.5 68 48.5
SMO147G0413 Selaginella moellendorffii HOM05D001276 ORTHO05D001085 1.4e-07 59.3 68 44.1
GSVIVG01016702001 Vitis vinifera HOM05D001276 ORTHO05D001085 1.9e-07 58.9 66 45.5
Manes.16G087900 Manihot esculenta HOM05D001276 ORTHO05D001085 3.2e-07 58.2 65 44.6
SMO143G0179 Selaginella moellendorffii HOM05D001276 ORTHO05D001085 3.2e-07 58.2 68 42.6
Solyc02g038720.2 Solanum lycopersicum HOM05D001276 ORTHO05D001085 3.2e-07 58.2 61 44.3
PGSC0003DMG400034344 Solanum tuberosum HOM05D001276 ORTHO05D001085 3.2e-07 58.2 61 44.3
ClCG09G001210 Citrullus lanatus HOM05D001276 ORTHO05D001085 4.2e-07 57.8 72 41.7
Eucgr.J02611 Eucalyptus grandis HOM05D001276 ORTHO05D001085 4.2e-07 57.8 72 43.1
Gorai.010G094200 Gossypium raimondii HOM05D001276 ORTHO05D001085 4.2e-07 57.8 73 42.5
Peaxi162Scf00431g00312 Petunia axillaris HOM05D001276 ORTHO05D001085 4.2e-07 57.8 61 42.6
ATR0681G319 Amborella trichopoda HOM05D001276 ORTHO05D001085 5.5e-07 57.4 71 45.1
CsaV3_7G034160 Cucumis sativus L. HOM05D001276 ORTHO05D001085 5.5e-07 57.4 72 41.7
Potri.006G217800 Populus trichocarpa HOM05D001276 ORTHO05D001085 5.5e-07 57.4 61 47.5
AagrBONN_evm.TU.Sc2ySwM_368.2242 Anthoceros agrestis HOM05D001276 ORTHO05D001085 7.1e-07 57.0 65 46.2
Cpa.g.sc82.20 Carica papaya HOM05D001276 ORTHO05D001085 7.1e-07 57.0 72 41.7
Cre13.g577100 Chlamydomonas reinhardtii HOM05D001276 ORTHO05D001085 7.1e-07 57.0 66 43.9
Gohir.D06G080800 Gossypium hirsutum HOM05D001276 ORTHO05D001085 7.1e-07 57.0 73 42.5
MBI19_g38001_MAGBIO Magnolia biondii HOM05D001276 ORTHO05D001085 7.1e-07 57.0 61 44.3
PRCOL_00004879 Prasinoderma coloniale HOM05D001276 ORTHO05D001085 7.1e-07 57.0 66 43.9
Thecc.09G066600 Theobroma cacao HOM05D001276 ORTHO05D001085 7.1e-07 57.0 73 43.8
Actinidia26008 Actinidia chinensis HOM05D001276 ORTHO05D001085 9.3e-07 56.6 71 43.7
Cc07_g12250 Coffea canephora HOM05D001276 ORTHO05D001085 9.3e-07 56.6 73 41.1
Os11g0521500 Oryza sativa ssp. japonica HOM05D001276 ORTHO05D001085 9.3e-07 56.6 54 50.0
Atru.chr7.1813 Acer truncatum HOM05D001276 ORTHO05D001085 1.2e-06 56.2 61 44.3
COL.COLO4_21170 Corchorus olitorius HOM05D001276 ORTHO05D001085 1.6e-06 55.8 61 44.3
Dinv20399 Davidia involucrata HOM05D001276 ORTHO05D001085 1.6e-06 55.8 72 41.7
Duzib168G1696 Durio zibethinus HOM05D001276 ORTHO05D001085 1.6e-06 55.8 63 42.9
FvH4_7g04450 Fragaria vesca HOM05D001276 ORTHO05D001085 1.6e-06 55.8 61 44.3
FAN03G2420 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.6e-06 55.8 61 44.3
FAN06G3313 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.6e-06 55.8 61 44.3
FAN06G4055 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.6e-06 55.8 61 44.3
FAN10G0664 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.6e-06 55.8 61 44.3
Pp3c17_24100 Physcomitrium patens HOM05D001276 ORTHO05D001085 1.6e-06 55.8 65 41.5
Pp3c17_24230 Physcomitrium patens HOM05D001276 ORTHO05D001085 1.6e-06 55.8 65 41.5
RcHm_v2.0_Chr2g0146771 Rosa chinensis HOM05D001276 ORTHO05D001085 1.6e-06 55.8 61 44.3
Sed0023283 Sechium edule HOM05D001276 ORTHO05D001085 1.6e-06 55.8 72 41.7
FAN01G3041 Fragaria x ananassa HOM05D001276 ORTHO05D001085 2.1e-06 55.5 61 44.3
Gohir.A06G081200 Gossypium hirsutum HOM05D001276 ORTHO05D001085 2.1e-06 55.5 73 41.1
Lsat_1_v5_gn_4_84020 Lactuca sativa HOM05D001276 ORTHO05D001085 2.1e-06 55.5 59 47.5
SalBow3G2070 Salvia bowleyana HOM05D001276 ORTHO05D001085 2.1e-06 55.5 71 45.1
SEGI_08479 Sequoiadendron giganteum HOM05D001276 ORTHO05D001085 2.1e-06 55.5 73 46.6
SEGI_20733 Sequoiadendron giganteum HOM05D001276 ORTHO05D001085 2.1e-06 55.5 73 46.6
Actinidia31159 Actinidia chinensis HOM05D001276 ORTHO05D001085 2.7e-06 55.1 71 42.3
CiPaw.02G133300 Carya illinoinensis HOM05D001276 ORTHO05D001085 2.7e-06 55.1 73 39.7
Ciclev10010174m.g Citrus clementina HOM05D001276 ORTHO05D001085 2.7e-06 55.1 71 42.3
Lsat_1_v5_gn_4_91621 Lactuca sativa HOM05D001276 ORTHO05D001085 2.7e-06 55.1 61 42.6
Nitab4.5_0000235g0190 Nicotiana tabacum HOM05D001276 ORTHO05D001085 2.7e-06 55.1 61 42.6
Prupe.3G035800 Prunus persica HOM05D001276 ORTHO05D001085 2.7e-06 55.1 61 42.6
AagrBONN_evm.TU.Sc2ySwM_368.2243 Anthoceros agrestis HOM05D000028 ORTHO05D000701 3.5e-06 54.7 73 39.7
Aqoxy7G00989 Aquilegia oxysepala HOM05D001276 ORTHO05D001085 3.5e-06 54.7 62 45.2
Phvul.010G126500 Phaseolus vulgaris HOM05D001276 ORTHO05D001085 3.5e-06 54.7 61 44.3
Dinv37841 Davidia involucrata HOM05D001276 ORTHO05D001085 4.6e-06 54.3 71 42.3
Duzib187G1045 Durio zibethinus HOM05D001276 ORTHO05D001085 4.6e-06 54.3 65 41.5
Glyma.07G042900 Glycine max HOM05D001276 ORTHO05D001085 4.6e-06 54.3 61 42.6
HanXRQChr09g0273951 Helianthus annuus HOM05D001276 ORTHO05D001085 4.6e-06 54.3 59 47.5
MD09G1176700 Malus domestica HOM05D001276 ORTHO05D001085 4.6e-06 54.3 61 42.6
MD17G1150100 Malus domestica HOM05D001276 ORTHO05D001085 4.6e-06 54.3 61 42.6
PGR102G0576 Punica granatum HOM05D001276 ORTHO05D001085 4.6e-06 54.3 69 39.1
TWI34G0596 Tripterygium wilfordii HOM05D001276 ORTHO05D001085 4.6e-06 54.3 61 44.3
ECA232G3969 Erigeron canadensis HOM05D001276 ORTHO05D001085 6.0e-06 53.9 61 42.6
FvH4_6g04190 Fragaria vesca HOM05D001276 ORTHO05D001085 6.0e-06 53.9 60 50.0
FAN14G3063 Fragaria x ananassa HOM05D001276 ORTHO05D001085 6.0e-06 53.9 60 50.0
MD00G1052000 Malus domestica HOM05D001276 ORTHO05D001085 6.0e-06 53.9 60 50.0
MD12G1230700 Malus domestica HOM05D001276 ORTHO05D001085 6.0e-06 53.9 60 50.0
Sc19g0004920 Simmondsia chinensis HOM05D001276 ORTHO05D001085 6.0e-06 53.9 61 50.8
FAN02G1817 Fragaria x ananassa HOM05D001276 ORTHO05D001085 7.9e-06 53.5 60 50.0
FAN09G2229 Fragaria x ananassa HOM05D001276 ORTHO05D001085 7.9e-06 53.5 60 50.0
FAN09G4240 Fragaria x ananassa HOM05D001276 ORTHO05D001085 7.9e-06 53.5 64 46.9
Pp3c14_24710 Physcomitrium patens HOM05D001276 ORTHO05D001085 7.9e-06 53.5 66 42.4
PGR119G0589 Punica granatum HOM05D001276 ORTHO05D001085 7.9e-06 53.5 58 48.3
RcHm_v2.0_Chr3g0452861 Rosa chinensis HOM05D001276 ORTHO05D001085 7.9e-06 53.5 60 50.0
Hund07013 Selenicereus undatus HOM05D001276 ORTHO05D001085 7.9e-06 53.5 64 42.2
THA.LOC104802818 Tarenaya hassleriana HOM05D001276 ORTHO05D001085 7.9e-06 53.5 61 47.5
VMungo0331G0272 Vigna mungo HOM05D001276 ORTHO05D001085 7.9e-06 53.5 61 42.6


User provided reference genes

Program Settings