Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 8.4e-276 953.0 453 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 1.7e-122 443.7 287 71.8
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.4e-121 440.7 293 68.6
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 7.0e-121 438.3 292 68.8
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 2.0e-120 436.8 293 67.6
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 2.0e-120 436.8 287 71.1
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 4.5e-120 435.6 317 63.1
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 1.3e-119 434.1 293 67.6
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 1.7e-119 433.7 293 67.2
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 2.2e-119 433.3 292 67.1
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 3.8e-119 432.6 292 67.5
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 8.5e-119 431.4 293 67.2
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 8.5e-119 431.4 302 64.2
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 8.5e-119 431.4 292 67.5
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.9e-118 430.3 292 67.1
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 2.5e-118 429.9 294 66.7
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 3.2e-118 429.5 290 67.9
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 4.2e-118 429.1 296 65.9
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 4.2e-118 429.1 296 65.5
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 5.5e-118 428.7 290 67.9
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 5.5e-118 428.7 293 67.6
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 7.2e-118 428.3 292 66.4
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.2e-117 427.6 292 65.4
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.2e-117 427.6 292 66.4
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.2e-117 427.6 292 66.4
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.2e-117 427.6 292 66.4
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 1.2e-117 427.6 293 66.6
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.2e-117 427.6 292 66.1
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 2.1e-117 426.8 293 66.2
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.7e-117 426.4 293 65.9
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 4.7e-117 425.6 294 66.0
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 6.1e-117 425.2 292 66.8
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 8.0e-117 424.9 292 65.8
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 8.0e-117 424.9 294 65.0
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.8e-116 423.7 295 66.1
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.8e-116 423.7 292 65.8
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 1.8e-116 423.7 299 65.2
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 1.8e-116 423.7 290 66.9
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.3e-116 423.3 292 66.1
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.0e-116 422.9 291 66.0
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 3.0e-116 422.9 292 64.7
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 3.0e-116 422.9 290 66.9
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 3.0e-116 422.9 292 65.4
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 4.0e-116 422.5 286 66.4
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 4.0e-116 422.5 292 64.7
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 6.7e-116 421.8 293 65.9
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 6.7e-116 421.8 293 65.2
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 2.0e-115 420.2 292 65.1
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 2.0e-115 420.2 293 65.9
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 2.0e-115 420.2 292 64.4
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 3.3e-115 419.5 292 65.4
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 5.7e-115 418.7 290 65.9
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 5.7e-115 418.7 292 65.4
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 7.5e-115 418.3 292 65.1
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 9.7e-115 417.9 293 64.5
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 9.7e-115 417.9 295 65.4
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.7e-114 417.2 292 65.1
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.2e-114 416.8 286 66.8
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.7e-114 416.0 292 64.4
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 4.8e-114 415.6 293 66.2
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 1.1e-113 414.5 293 64.2
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 1.1e-113 414.5 293 65.2
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 3.1e-113 412.9 292 64.4
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 5.3e-113 412.1 293 64.5
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 5.3e-113 412.1 291 63.9
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 9.1e-113 411.4 299 63.2
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.2e-112 411.0 293 63.8
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 2.7e-112 409.8 293 64.2
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 3.5e-112 409.5 291 64.3
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 4.5e-112 409.1 294 63.9
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 1.3e-111 407.5 319 59.2
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.7e-111 407.1 295 64.1
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 1.1e-110 404.4 293 63.1
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 1.5e-110 404.1 293 63.5
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 4.2e-110 402.5 303 62.0
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 3.6e-109 399.4 292 63.4
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 2.3e-108 396.7 293 62.8
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 2.0e-107 393.7 299 62.2
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 2.0e-107 393.7 294 62.6
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 4.4e-107 392.5 299 61.9
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 4.4e-107 392.5 299 61.9
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 4.4e-107 392.5 299 61.9
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 7.0e-105 385.2 332 56.9
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 7.2e-102 375.2 265 65.3
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 1.5e-99 367.5 257 66.9
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 1.7e-98 364.0 256 64.5
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 6.6e-95 352.1 249 63.1
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 4.3e-94 349.4 251 62.5
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 1.6e-93 347.4 243 65.4
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 1.8e-92 344.0 235 66.8
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 2.3e-92 343.6 235 65.1
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 5.2e-92 342.4 254 63.4
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 2.9e-90 336.7 235 64.7
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.1e-89 334.7 260 61.2
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.1e-89 334.7 303 55.1
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 9.8e-83 311.6 228 62.7
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 1.7e-79 300.8 219 62.1
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 4.3e-78 296.2 198 65.2
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.8e-76 290.8 202 65.3
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.5e-70 270.4 223 57.4
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.4e-68 263.8 176 63.6
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 1.7e-66 257.7 303 47.9
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 7.1e-65 252.3 263 49.0
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 8.7e-63 245.4 232 52.2
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.5e-62 244.6 169 65.7
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 3.5e-56 223.4 267 45.3
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 3.8e-50 203.4 187 53.5
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 8.7e-47 192.2 134 68.7
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 4.0e-44 183.3 137 62.8
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.4e-43 180.3 174 50.6
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.1e-41 175.3 275 35.6
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.1e-38 165.2 283 37.1
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 3.2e-33 147.1 146 52.1
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.6e-32 143.3 98 69.4
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 3.9e-31 140.2 151 51.0
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.3e-29 135.2 278 33.5
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 3.1e-28 130.6 252 34.5
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 7.7e-19 99.4 158 34.2
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 2.1e-16 91.3 133 42.9
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 9.1e-12 75.9 51 66.7
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.7e-10 71.6 53 60.4
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 5.0e-10 70.1 57 56.1
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 6.7e-07 59.7 42 61.9


User provided reference genes

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