Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 8.8e-187 657.1 419 100.0
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 7.5e-53 212.2 170 64.1
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 5.4e-51 206.1 157 65.6
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 6.6e-49 199.1 192 56.2
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 9.8e-45 185.3 165 60.0
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 2.2e-44 184.1 140 64.3
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 1.1e-43 181.8 143 62.9
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 4.1e-43 179.9 142 62.7
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 4.1e-43 179.9 162 59.3
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 4.1e-43 179.9 137 65.7
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 4.1e-43 179.9 137 65.7
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 5.4e-43 179.5 148 64.2
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 5.4e-43 179.5 145 62.8
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 7.0e-43 179.1 136 66.9
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 7.0e-43 179.1 136 66.2
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 7.0e-43 179.1 136 66.2
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 9.2e-43 178.7 178 57.3
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.2e-42 178.3 133 66.2
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.2e-42 178.3 133 66.2
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 1.2e-42 178.3 136 63.2
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 1.6e-42 177.9 133 66.2
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 1.6e-42 177.9 166 55.4
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 1.6e-42 177.9 139 66.9
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 1.6e-42 177.9 139 65.5
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.6e-42 177.9 139 65.5
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 2.1e-42 177.6 133 65.4
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 2.1e-42 177.6 133 65.4
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 2.1e-42 177.6 133 65.4
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 2.1e-42 177.6 133 65.4
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 2.1e-42 177.6 133 65.4
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 2.1e-42 177.6 139 64.7
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 2.1e-42 177.6 142 63.4
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 2.1e-42 177.6 134 66.4
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 2.1e-42 177.6 137 65.0
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 2.7e-42 177.2 133 64.7
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 2.7e-42 177.2 133 64.7
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 3.5e-42 176.8 157 58.6
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.5e-42 176.8 151 61.6
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 3.5e-42 176.8 149 61.7
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 3.5e-42 176.8 137 64.2
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 4.6e-42 176.4 203 50.2
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 4.6e-42 176.4 151 58.9
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 4.6e-42 176.4 134 65.7
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 6.0e-42 176.0 140 62.1
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 6.0e-42 176.0 134 65.7
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 6.0e-42 176.0 137 62.8
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 7.8e-42 175.6 160 60.6
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 7.8e-42 175.6 140 62.9
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.0e-41 175.3 139 65.5
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.0e-41 175.3 132 65.9
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.0e-41 175.3 140 63.6
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 1.3e-41 174.9 181 54.7
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 1.3e-41 174.9 147 60.5
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 1.7e-41 174.5 162 58.0
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 1.7e-41 174.5 162 58.0
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 2.3e-41 174.1 142 63.4
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 2.3e-41 174.1 146 61.0
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 3.0e-41 173.7 128 68.8
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 3.0e-41 173.7 148 58.1
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 3.0e-41 173.7 153 58.8
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 3.0e-41 173.7 151 58.9
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 3.9e-41 173.3 139 62.6
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 3.9e-41 173.3 142 63.4
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 5.0e-41 172.9 241 44.0
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 5.0e-41 172.9 137 60.6
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 5.0e-41 172.9 137 60.6
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 5.0e-41 172.9 134 65.7
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 6.6e-41 172.6 132 64.4
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 6.6e-41 172.6 154 57.8
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 6.6e-41 172.6 138 61.6
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 6.6e-41 172.6 177 52.5
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 6.6e-41 172.6 132 65.9
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 8.6e-41 172.2 137 62.0
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 8.6e-41 172.2 133 62.4
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 8.6e-41 172.2 131 64.1
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.1e-40 171.8 159 57.9
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 1.1e-40 171.8 139 61.2
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 1.1e-40 171.8 136 62.5
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 1.9e-40 171.0 134 61.9
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 1.9e-40 171.0 165 57.0
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 2.5e-40 170.6 134 61.9
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 3.3e-40 170.2 141 59.6
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 4.3e-40 169.9 133 62.4
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 4.3e-40 169.9 172 54.7
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 5.6e-40 169.5 129 67.4
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 5.6e-40 169.5 129 67.4
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.2e-39 168.3 134 63.4
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.6e-39 167.9 154 56.5
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.6e-39 167.9 135 63.0
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.6e-39 167.9 160 54.4
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 2.8e-39 167.2 133 65.4
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 2.8e-39 167.2 137 59.9
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 3.6e-39 166.8 148 57.4
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 4.7e-39 166.4 146 58.2
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.7e-39 166.4 146 58.2
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 6.2e-39 166.0 162 53.7
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 6.2e-39 166.0 122 68.9
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.0e-38 163.3 134 60.4
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 2.6e-37 160.6 129 63.6
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 9.9e-37 158.7 125 62.4
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 2.2e-36 157.5 163 52.8
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 2.2e-36 157.5 149 57.0
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 1.1e-32 145.2 114 64.0
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 1.9e-32 144.4 138 52.9
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 4.3e-32 143.3 199 44.7
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 2.8e-31 140.6 111 63.1
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 8.1e-31 139.0 107 66.4
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.4e-30 137.5 137 51.1
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 2.4e-30 137.5 103 64.1
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 9.9e-29 132.1 175 44.0
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 8.4e-28 129.0 166 47.0
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 9.6e-24 115.5 134 42.5
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 2.1e-23 114.4 98 58.2
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 2.7e-18 97.4 97 52.6
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 3.9e-17 93.6 71 62.0
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 5.3e-14 83.2 71 62.0
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.0e-13 81.3 64 65.6
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 2.0e-13 81.3 130 42.3
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 4.2e-11 73.6 92 43.5
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 2.7e-10 70.9 62 53.2


User provided reference genes

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