Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38900 Chara braunii HOM05D021006 ORTHO05D024937 2.1e-309 1065.1 613 100.0
CBR_g38904 Chara braunii HOM05D021006 ORTHO05D024937 5.4e-193 678.3 373 93.0
CBR_g38907 Chara braunii HOM05D021006 ORTHO05D024937 8.3e-117 425.2 368 60.1
CBR_g38908 Chara braunii HOM05D021006 ORTHO05D024937 1.0e-114 418.3 368 59.5
CBR_g34837 Chara braunii HOM05D021006 ORTHO05D132656 4.5e-14 84.0 95 60.0
PRCOL_00005991 Prasinoderma coloniale HOM05D003516 ORTHO05D004068 2.1e-11 75.1 149 30.9
Ciclev10011701m.g Citrus clementina HOM05D003516 ORTHO05D004068 2.3e-10 71.6 141 31.9
Peaxi162Scf00166g00944 Petunia axillaris HOM05D003516 ORTHO05D004068 8.8e-10 69.7 155 29.0
Solyc02g088510.4 Solanum lycopersicum HOM05D003516 ORTHO05D004068 2.0e-09 68.6 161 26.7
Mapoly0061s0022 Marchantia polymorpha HOM05D003516 ORTHO05D004068 7.5e-09 66.6 165 28.5
Psat1g069160 Pisum sativum HOM05D003516 ORTHO05D004068 7.5e-09 66.6 161 29.8
Gohir.A05G369500 Gossypium hirsutum HOM05D003516 ORTHO05D004068 9.7e-09 66.2 143 33.6
Gohir.D04G045800 Gossypium hirsutum HOM05D003516 ORTHO05D004068 1.3e-08 65.9 143 33.6
Gorai.012G051000 Gossypium raimondii HOM05D003516 ORTHO05D004068 1.3e-08 65.9 143 33.6
HanXRQChr14g0448661 Helianthus annuus HOM05D003516 ORTHO05D004068 1.3e-08 65.9 145 32.4
Medtr4g094268 Medicago truncatula HOM05D003516 ORTHO05D004068 1.3e-08 65.9 154 29.2
VMungo1383G2485 Vigna mungo HOM05D003516 ORTHO05D004068 1.3e-08 65.9 142 30.3
Sopen02g033200 Solanum pennellii HOM05D003516 ORTHO05D004068 2.2e-08 65.1 142 27.5
PGSC0003DMG402001347 Solanum tuberosum HOM05D003516 ORTHO05D004068 2.2e-08 65.1 142 26.8
PRCOL_00002046 Prasinoderma coloniale HOM05D021006 ORTHO05D024937 2.8e-08 64.7 158 29.7
CDE04G1400 Ceratophyllum demersum HOM05D003516 ORTHO05D004068 3.7e-08 64.3 141 27.7
Lsat_1_v5_gn_2_87981 Lactuca sativa HOM05D003516 ORTHO05D004068 3.7e-08 64.3 140 29.3
Solyc02g088490.3 Solanum lycopersicum HOM05D003516 ORTHO05D004068 3.7e-08 64.3 142 26.8
Phvul.004G033000 Phaseolus vulgaris HOM05D003516 ORTHO05D004068 6.3e-08 63.5 142 30.3
Cc01_g02130 Coffea canephora HOM05D005532 ORTHO05D006873 8.2e-08 63.2 144 29.9
PGSC0003DMG401001347 Solanum tuberosum HOM05D003516 ORTHO05D004068 1.1e-07 62.8 142 26.1
CAN.G206.192 Capsicum annuum HOM05D003516 ORTHO05D004068 1.8e-07 62.0 142 26.8
Lalb_Chr02g0159071 Lupinus albus HOM05D003516 ORTHO05D004068 1.8e-07 62.0 145 30.3
Phvul.008G040100 Phaseolus vulgaris HOM05D003516 ORTHO05D004068 2.4e-07 61.6 142 28.9
arahy.Tifrunner.gnm1.ann1.3ST4SV Arachis hypogaea HOM05D003516 ORTHO05D004068 3.1e-07 61.2 155 31.0
AUR62039849 Chenopodium quinoa HOM05D005532 ORTHO05D006873 3.1e-07 61.2 180 30.0
Ah.04g162030 Amaranthus hybridus HOM05D005532 ORTHO05D006873 4.1e-07 60.8 181 27.6
BcaB06g27298 Brassica carinata HOM05D003516 ORTHO05D004068 4.1e-07 60.8 143 29.4
C04p45730 Brassica napus HOM05D003516 ORTHO05D004068 4.1e-07 60.8 143 29.4
BolC4t26158H Brassica oleracea HOM05D003516 ORTHO05D004068 4.1e-07 60.8 143 29.4
SMO364G0897 Selaginella moellendorffii HOM05D003516 ORTHO05D004068 4.1e-07 60.8 149 27.5
HanXRQChr02g0051521 Helianthus annuus HOM05D005532 ORTHO05D006873 5.3e-07 60.5 150 31.3
MCO12G151 Micromonas commoda HOM05D003516 ORTHO05D004068 5.3e-07 60.5 167 25.7
PGR119G0320 Punica granatum HOM05D005532 ORTHO05D006873 5.3e-07 60.5 155 30.3
TPR.G26192 Trifolium pratense HOM05D003516 ORTHO05D004068 5.3e-07 60.5 158 27.8
CARHR262950 Cardamine hirsuta HOM05D003516 ORTHO05D004068 7.0e-07 60.1 143 29.4
Lsat_1_v5_gn_6_26061 Lactuca sativa HOM05D005532 ORTHO05D006873 7.0e-07 60.1 148 29.7
SEGI_01701 Sequoiadendron giganteum HOM05D003516 ORTHO05D004068 7.0e-07 60.1 146 28.8
AL7G50920 Arabidopsis lyrata HOM05D003516 ORTHO05D004068 9.1e-07 59.7 143 28.7
arahy.Tifrunner.gnm1.ann1.BNNE9K Arachis hypogaea HOM05D003516 ORTHO05D004068 9.1e-07 59.7 143 30.1
MSTRG.3024 Avicennia marina HOM05D003516 ORTHO05D004068 1.2e-06 59.3 142 27.5
BcaB06g27324 Brassica carinata HOM05D003516 ORTHO05D004068 1.2e-06 59.3 143 29.4
A04p12100 Brassica napus HOM05D003516 ORTHO05D004068 1.2e-06 59.3 143 28.7
BraA04t16875Z Brassica rapa HOM05D003516 ORTHO05D004068 1.2e-06 59.3 143 28.7
Glyma.13G059300 Glycine max HOM05D003516 ORTHO05D004068 1.2e-06 59.3 145 29.0
Sopen02g033240 Solanum pennellii HOM05D003516 ORTHO05D004068 1.2e-06 59.3 109 30.3
VMungo0464G1139 Vigna mungo HOM05D003516 ORTHO05D004068 1.2e-06 59.3 142 27.5
Carub.0007s3653 Capsella rubella HOM05D003516 ORTHO05D004068 1.6e-06 58.9 143 28.0
ECA233G0258 Erigeron canadensis HOM05D005532 ORTHO05D006873 1.6e-06 58.9 146 31.5
Glyma.08G241300 Glycine max HOM05D003516 ORTHO05D004068 1.6e-06 58.9 142 28.9
Mapoly0066s0102 Marchantia polymorpha HOM05D005532 ORTHO05D006873 1.6e-06 58.9 149 28.9
Zm00001eb326640 Zea mays HOM05D003516 ORTHO05D004068 1.6e-06 58.9 145 29.0
AUR62000162 Chenopodium quinoa HOM05D005532 ORTHO05D006873 2.0e-06 58.5 183 27.3
Thhalv10027760m.g Eutrema salsugineum HOM05D003516 ORTHO05D004068 2.0e-06 58.5 143 28.0
RcHm_v2.0_Chr2g0166731 Rosa chinensis HOM05D003516 ORTHO05D004068 2.0e-06 58.5 142 28.2
Thecc.04G089600 Theobroma cacao HOM05D003516 ORTHO05D004068 2.0e-06 58.5 143 31.5
Lj1A319T38 Lonicera japonica HOM05D005532 ORTHO05D006873 3.5e-06 57.8 153 28.1
Sp7g02570 Schrenkiella parvula HOM05D003516 ORTHO05D004068 3.5e-06 57.8 143 28.0
SMO367G1041 Selaginella moellendorffii HOM05D005532 ORTHO05D006873 3.5e-06 57.8 144 27.8
Aa31LG10G3830 Aethionema arabicum HOM05D005532 ORTHO05D006873 4.5e-06 57.4 142 29.6
ATR0111G016 Amborella trichopoda HOM05D003516 ORTHO05D004068 4.5e-06 57.4 154 25.3
Aa31LG9G16580 Aethionema arabicum HOM05D003516 ORTHO05D004068 5.9e-06 57.0 143 27.3
Pp3c7_23970 Physcomitrium patens HOM05D003516 ORTHO05D004068 5.9e-06 57.0 161 26.1
SEGI_26660 Sequoiadendron giganteum HOM05D003516 ORTHO05D004068 5.9e-06 57.0 141 27.0
AagrBONN_evm.TU.Sc2ySwM_228.5734 Anthoceros agrestis HOM05D003516 ORTHO05D004068 7.7e-06 56.6 151 25.2
HanXRQChr13g0401441 Helianthus annuus HOM05D005532 ORTHO05D006873 7.7e-06 56.6 146 30.8


User provided reference genes

Program Settings