Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38576 Chara braunii HOM05D003532 ORTHO05D003298 5.5e-287 990.3 524 100.0
CBR_g57789 Chara braunii HOM05D003532 ORTHO05D003298 3.6e-222 775.0 530 74.0
CBR_g38594 Chara braunii HOM05D003532 ORTHO05D003298 2.9e-219 765.4 526 73.6
CBR_g36281 Chara braunii HOM05D003532 ORTHO05D003298 5.6e-199 698.0 496 71.8
CBR_g38589 Chara braunii HOM05D003532 ORTHO05D003298 5.3e-197 691.4 524 66.6
CBR_g12185 Chara braunii HOM05D003532 ORTHO05D003298 7.1e-194 681.0 523 65.6
CBR_g38599 Chara braunii HOM05D003532 ORTHO05D003298 1.3e-187 660.2 521 65.1
CBR_g12182 Chara braunii HOM05D003532 ORTHO05D003298 4.2e-186 655.2 500 66.0
CBR_g38597 Chara braunii HOM05D003532 ORTHO05D003298 2.6e-167 592.8 521 60.3
CBR_g85241 Chara braunii HOM05D003532 ORTHO05D003298 1.6e-108 397.5 331 63.1
CBR_g40961 Chara braunii HOM05D003532 ORTHO05D000353 1.3e-97 361.3 523 40.5
CBR_g38595 Chara braunii HOM05D003532 ORTHO05D003298 3.0e-83 313.5 435 43.4
CBR_g12864 Chara braunii HOM05D003532 ORTHO05D003298 2.5e-66 257.3 531 32.2
CBR_g12867 Chara braunii HOM05D000019 ORTHO05D003298 7.4e-66 255.8 534 32.2
CBR_g40030 Chara braunii HOM05D007859 ORTHO05D003298 1.5e-63 248.1 524 31.5
CBR_g45627 Chara braunii HOM05D003532 ORTHO05D003298 6.5e-54 216.1 542 29.5
CBR_g46414 Chara braunii HOM05D003532 ORTHO05D003298 2.2e-49 201.1 544 29.4
CBR_g12862 Chara braunii HOM05D003532 ORTHO05D003298 2.2e-38 164.5 451 28.6
CBR_g46001 Chara braunii HOM05D003532 ORTHO05D003298 2.3e-30 137.9 182 39.6
Nn1g07430 Nelumbo nucifera HOM05D003532 ORTHO05D003298 1.2e-20 105.5 528 22.0
Glyma.18G081800 Glycine max HOM05D003532 ORTHO05D003298 2.8e-20 104.4 527 22.6
Medtr3g055970 Medicago truncatula HOM05D003532 ORTHO05D003298 2.8e-20 104.4 525 22.7
Psat5g171200 Pisum sativum HOM05D003532 ORTHO05D003298 6.1e-20 103.2 525 21.7
Ca_16739_v3 Cicer arietinum L. HOM05D003532 ORTHO05D003298 1.4e-19 102.1 510 22.0
TPR.G1921 Trifolium pratense HOM05D003532 ORTHO05D003298 3.0e-19 100.9 525 21.3
CANSAT11G0309 Cannabis sativa HOM05D003532 ORTHO05D003298 6.8e-19 99.8 524 26.9
CiPaw.11G200200 Carya illinoinensis HOM05D003532 ORTHO05D003298 6.8e-19 99.8 526 21.7
Manes.15G064000 Manihot esculenta HOM05D003532 ORTHO05D003298 6.8e-19 99.8 528 22.5
Hund23137 Selenicereus undatus HOM05D003532 ORTHO05D003298 8.9e-19 99.4 530 26.2
Cfa020236 Carpinus fangiana HOM05D003532 ORTHO05D003298 1.5e-18 98.6 524 23.1
Oeu019616.1 Olea europaea HOM05D003532 ORTHO05D003298 1.5e-18 98.6 525 21.3
VMungo0540G1592 Vigna mungo HOM05D003532 ORTHO05D003298 1.5e-18 98.6 530 22.3
Lalb_Chr15g0081911 Lupinus albus HOM05D003532 ORTHO05D003298 2.0e-18 98.2 524 21.6
CSS0034495 Camellia sinensis var. sinensis HOM05D003532 ORTHO05D003298 2.6e-18 97.8 526 21.7
Dinv10304 Davidia involucrata HOM05D003532 ORTHO05D003298 4.4e-18 97.1 524 21.4
Duzib213G0377 Durio zibethinus HOM05D003532 ORTHO05D003298 4.4e-18 97.1 525 23.2
Prupe.4G231800 Prunus persica HOM05D003532 ORTHO05D003298 5.8e-18 96.7 526 21.7
Phvul.006G052900 Phaseolus vulgaris HOM05D003532 ORTHO05D003298 1.3e-17 95.5 515 22.3
Ah.06g181150 Amaranthus hybridus HOM05D003532 ORTHO05D003298 1.7e-17 95.1 536 22.6
AUR62015940 Chenopodium quinoa HOM05D003532 ORTHO05D003298 2.2e-17 94.7 524 21.6
MD03G1189500 Malus domestica HOM05D003532 ORTHO05D003298 2.9e-17 94.4 526 23.4
TWI39G0358 Tripterygium wilfordii HOM05D003532 ORTHO05D003298 2.9e-17 94.4 528 22.9
Ciclev10007256m.g Citrus clementina HOM05D003532 ORTHO05D003298 3.7e-17 94.0 525 26.9
Solyc03g112750.4 Solanum lycopersicum HOM05D003532 ORTHO05D003298 3.7e-17 94.0 532 24.4
Cc05_g14600 Coffea canephora HOM05D003532 ORTHO05D003298 4.9e-17 93.6 523 23.1
Nitab4.5_0003218g0080 Nicotiana tabacum HOM05D003532 ORTHO05D003298 4.9e-17 93.6 525 22.3
SHI26496 Sapria himalayana HOM05D003532 ORTHO05D003298 4.9e-17 93.6 507 23.5
Glyma.08G325400 Glycine max HOM05D003532 ORTHO05D003298 6.4e-17 93.2 522 22.4
Nitab4.5_0002423g0060 Nicotiana tabacum HOM05D003532 ORTHO05D003298 8.3e-17 92.8 526 22.2
arahy.Tifrunner.gnm1.ann1.5HZ9E9 Arachis hypogaea HOM05D003532 ORTHO05D003298 1.1e-16 92.4 517 21.9
CAN.G1166.12 Capsicum annuum HOM05D003532 ORTHO05D003298 1.9e-16 91.7 511 24.3
Potri.001G361200 Populus trichocarpa HOM05D003532 ORTHO05D003298 1.9e-16 91.7 524 25.4
ClCG09G021030 Citrullus lanatus HOM05D003532 ORTHO05D003298 2.4e-16 91.3 501 22.4
Gohir.A01G086600 Gossypium hirsutum HOM05D003532 ORTHO05D003298 2.4e-16 91.3 523 21.6
Sopen03g031830 Solanum pennellii HOM05D003532 ORTHO05D003298 2.4e-16 91.3 532 24.2
Cpa.g.sc12.202 Carica papaya HOM05D003532 ORTHO05D003298 3.2e-16 90.9 509 21.8
Haze_09779 Corylus avellana HOM05D003532 ORTHO05D003298 3.2e-16 90.9 518 22.6
Sc07g0002980 Simmondsia chinensis HOM05D003532 ORTHO05D003298 4.1e-16 90.5 526 21.9
Aqoxy1G04019 Aquilegia oxysepala HOM05D003532 ORTHO05D003298 5.4e-16 90.1 527 21.4
Gohir.D01G072800 Gossypium hirsutum HOM05D003532 ORTHO05D003298 5.4e-16 90.1 523 21.6
Gorai.002G095800 Gossypium raimondii HOM05D003532 ORTHO05D003298 5.4e-16 90.1 523 21.6
Peaxi162Scf00568g00016 Petunia axillaris HOM05D003532 ORTHO05D003298 5.4e-16 90.1 530 21.7
Sed0014342 Sechium edule HOM05D003532 ORTHO05D003298 5.4e-16 90.1 535 20.9
Thecc.07G023400 Theobroma cacao HOM05D003532 ORTHO05D003298 5.4e-16 90.1 523 21.4
QL08p005936 Quercus lobata HOM05D003532 ORTHO05D003298 7.0e-16 89.7 524 21.2
CsaV3_7G018660 Cucumis sativus L. HOM05D003532 ORTHO05D003298 9.2e-16 89.4 520 25.8
Mapoly0072s0037 Marchantia polymorpha HOM05D003532 ORTHO05D003298 9.2e-16 89.4 551 22.1
PGR083G2272 Punica granatum HOM05D003532 ORTHO05D003298 9.2e-16 89.4 522 22.8
AagrBONN_evm.TU.Sc2ySwM_368.290 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.2e-15 89.0 529 21.0
Lsat_1_v5_gn_0_15220 Lactuca sativa HOM05D003532 ORTHO05D003298 1.2e-15 89.0 532 22.2
Sabra16G0238200 Salix brachista HOM05D003532 ORTHO05D003298 1.2e-15 89.0 509 25.5
MELO3C024898.2 Cucumis melo HOM05D003532 ORTHO05D003298 1.6e-15 88.6 501 25.9
ECA240G1125 Erigeron canadensis HOM05D003532 ORTHO05D003298 1.6e-15 88.6 526 21.3
Carub.0008s1589 Capsella rubella HOM05D003532 ORTHO05D003298 2.0e-15 88.2 536 21.8
COL.COLO4_09777 Corchorus olitorius HOM05D003532 ORTHO05D003298 2.0e-15 88.2 515 21.7
PSO210G6712 Papaver somniferum HOM05D003532 ORTHO05D003298 2.0e-15 88.2 530 22.3
PGSC0003DMG400018160 Solanum tuberosum HOM05D003532 ORTHO05D003298 2.7e-15 87.8 513 23.6
Mapoly0007s0136 Marchantia polymorpha HOM05D005435 ORTHO05D007370 3.5e-15 87.4 522 23.0
THA.LOC104811650 Tarenaya hassleriana HOM05D003532 ORTHO05D003298 3.5e-15 87.4 524 21.2
BcaB08g35909 Brassica carinata HOM05D003532 ORTHO05D003298 7.8e-15 86.3 524 22.3
C09p46210 Brassica napus HOM05D003532 ORTHO05D003298 7.8e-15 86.3 524 22.3
Lj6g0018545 Lotus japonicus HOM05D003532 ORTHO05D003298 7.8e-15 86.3 529 24.0
vmacro11564 Vaccinium macrocarpon HOM05D003532 ORTHO05D003298 7.8e-15 86.3 521 23.6
Migut.M01683 Erythranthe guttata HOM05D003532 ORTHO05D003298 1.0e-14 85.9 542 21.4
BolC9t57486H Brassica oleracea HOM05D003532 ORTHO05D003298 1.3e-14 85.5 524 22.3
Atru.chr2.3624 Acer truncatum HOM05D003532 ORTHO05D003298 1.7e-14 85.1 519 24.1
Eucgr.F00625 Eucalyptus grandis HOM05D003532 ORTHO05D003298 3.0e-14 84.3 525 22.1
Thhalv10012444m.g Eutrema salsugineum HOM05D003532 ORTHO05D003298 3.9e-14 84.0 526 24.0
AL8G31090 Arabidopsis lyrata HOM05D003532 ORTHO05D003298 5.0e-14 83.6 530 21.5
A10p12730 Brassica napus HOM05D003532 ORTHO05D003298 5.0e-14 83.6 524 21.9
BraA10t43365Z Brassica rapa HOM05D003532 ORTHO05D003298 5.0e-14 83.6 524 21.9
AagrBONN_evm.TU.Sc2ySwM_368.1056 Anthoceros agrestis HOM05D003532 ORTHO05D003298 6.6e-14 83.2 516 20.3
AT5G55540 Arabidopsis thaliana HOM05D003532 ORTHO05D003298 6.6e-14 83.2 530 21.5
FAN11G2286 Fragaria x ananassa HOM05D003532 ORTHO05D003298 6.6e-14 83.2 542 25.3
Rhsim06G0226200 Rhododendron simsii HOM05D003532 ORTHO05D003298 6.6e-14 83.2 513 21.1
RcHm_v2.0_Chr5g0042451 Rosa chinensis HOM05D003532 ORTHO05D003298 6.6e-14 83.2 534 25.5
DCAR_016632 Daucus carota HOM05D003532 ORTHO05D003298 2.5e-13 81.3 525 22.1
FvH4_3g23950 Fragaria vesca HOM05D003532 ORTHO05D003298 3.3e-13 80.9 542 25.1
FAN25G3696 Fragaria x ananassa HOM05D003532 ORTHO05D003298 4.3e-13 80.5 530 27.0
ATR0712G118 Amborella trichopoda HOM05D003532 ORTHO05D003298 9.5e-13 79.3 528 20.8
CARHR268860 Cardamine hirsuta HOM05D003532 ORTHO05D003298 1.2e-12 79.0 525 21.1
FAN21G0475 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.2e-12 79.0 530 26.0
TAR631G0007 Trochodendron aralioides HOM05D003532 ORTHO05D003298 1.2e-12 79.0 526 23.0
FAN16G2517 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.6e-12 78.6 530 25.8
FAN25G2872 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.6e-12 78.6 530 23.2
AagrBONN_evm.TU.Sc2ySwM_368.264 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.1e-12 78.2 545 21.7
SalBow8G0547 Salvia bowleyana HOM05D003532 ORTHO05D003298 3.6e-12 77.4 509 21.0
AagrBONN_evm.TU.Sc2ySwM_362.1677 Anthoceros agrestis HOM05D021531 ORTHO05D015853 8.9e-11 72.8 170 30.6
AagrBONN_evm.TU.Sc2ySwM_368.330 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.5e-10 72.0 531 21.1
Sp6g17430 Schrenkiella parvula HOM05D003532 ORTHO05D003298 3.4e-10 70.9 504 20.6
HPP92_012225 Vanilla planifolia HOM05D003532 ORTHO05D003298 7.5e-10 69.7 498 21.7
AagrBONN_evm.TU.Sc2ySwM_362.1906 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.3e-09 68.9 413 20.6
SGA_v2.0_scaffold171G38893 Striga asiatica HOM05D003532 ORTHO05D003298 1.3e-09 68.9 228 25.4
Actinidia00098 Actinidia chinensis HOM05D003532 ORTHO05D003298 2.2e-09 68.2 508 22.4
Mapoly0002s0170 Marchantia polymorpha HOM05D003532 ORTHO05D003298 2.2e-09 68.2 543 23.6
Mapoly0068s0033 Marchantia polymorpha HOM05D003532 ORTHO05D003298 2.9e-09 67.8 136 27.9
Zm00001eb057430 Zea mays HOM05D003532 ORTHO05D003298 6.4e-09 66.6 241 24.1
AagrBONN_evm.TU.Sc2ySwM_362.1938 Anthoceros agrestis HOM05D003532 ORTHO05D003298 5.4e-08 63.5 195 29.2
AUR62040668 Chenopodium quinoa HOM05D003532 ORTHO05D003298 1.6e-07 62.0 186 26.3
unitig_899.g15279 Utricularia gibba HOM05D003532 ORTHO05D003298 1.6e-07 62.0 240 23.8
AagrBONN_evm.TU.Sc2ySwM_344.5368 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.1e-07 61.6 455 19.6
GSVIVG01037769001 Vitis vinifera HOM05D003532 ORTHO05D003298 2.1e-07 61.6 166 27.7
EL10Ac4g07624 Beta vulgaris HOM05D003532 ORTHO05D003298 2.7e-07 61.2 185 26.5
Lj1P884T43 Lonicera japonica HOM05D003532 ORTHO05D003298 2.7e-07 61.2 173 26.6
Mapoly0157s0002 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.0e-06 59.3 113 30.1
Aa31LG3G11480 Aethionema arabicum HOM05D003532 ORTHO05D003298 5.1e-06 57.0 168 26.8
Mapoly0046s0036 Marchantia polymorpha HOM05D003532 ORTHO05D003298 8.6e-06 56.2 146 26.0


User provided reference genes

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