Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 5.2e-256 887.5 538 100.0
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 9.4e-32 142.5 114 59.6
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 7.9e-31 139.4 108 61.1
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 1.1e-29 135.6 116 55.2
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 9.7e-29 132.5 129 48.8
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 2.2e-28 131.3 113 52.2
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 2.8e-28 131.0 126 48.4
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.8e-28 131.0 126 50.8
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.8e-28 131.0 126 48.4
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 4.8e-28 130.2 127 48.0
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 4.8e-28 130.2 126 50.8
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 4.8e-28 130.2 145 45.5
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 6.3e-28 129.8 113 52.2
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 6.3e-28 129.8 145 45.5
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 6.3e-28 129.8 126 50.8
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 8.2e-28 129.4 113 50.4
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 8.2e-28 129.4 145 45.5
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 1.1e-27 129.0 113 52.2
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 1.4e-27 128.6 124 50.0
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 1.8e-27 128.3 145 44.8
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.8e-27 128.3 145 44.8
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.8e-27 128.3 123 48.0
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.4e-27 127.9 113 52.2
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 2.4e-27 127.9 126 49.2
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 2.4e-27 127.9 127 46.5
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 3.1e-27 127.5 113 50.4
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 3.1e-27 127.5 127 46.5
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 3.1e-27 127.5 134 47.0
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 4.1e-27 127.1 115 50.4
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 4.1e-27 127.1 145 44.8
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 4.1e-27 127.1 116 51.7
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.1e-27 127.1 113 51.3
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 4.1e-27 127.1 126 50.0
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 4.1e-27 127.1 113 51.3
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 5.3e-27 126.7 113 52.2
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 5.3e-27 126.7 124 46.8
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 5.3e-27 126.7 115 49.6
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 5.3e-27 126.7 122 46.7
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 7.0e-27 126.3 124 45.2
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 7.0e-27 126.3 126 46.0
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 9.1e-27 125.9 113 52.2
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 9.1e-27 125.9 105 56.2
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 9.1e-27 125.9 127 45.7
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 1.2e-26 125.6 115 50.4
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.2e-26 125.6 113 50.4
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 1.2e-26 125.6 116 50.0
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 1.2e-26 125.6 123 45.5
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 1.2e-26 125.6 126 48.4
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.6e-26 125.2 124 47.6
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.6e-26 125.2 113 49.6
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 1.6e-26 125.2 124 46.8
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 1.6e-26 125.2 131 48.1
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.6e-26 125.2 109 49.5
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 2.0e-26 124.8 113 50.4
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.0e-26 124.8 124 46.8
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 2.0e-26 124.8 113 50.4
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 2.6e-26 124.4 126 48.4
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 2.6e-26 124.4 143 44.1
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 2.6e-26 124.4 109 51.4
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 3.5e-26 124.0 139 44.6
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 3.5e-26 124.0 124 46.0
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.5e-26 124.0 124 46.0
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 3.5e-26 124.0 124 45.2
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 3.5e-26 124.0 109 51.4
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 4.5e-26 123.6 143 44.8
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 5.9e-26 123.2 124 44.4
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 5.9e-26 123.2 124 44.4
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 7.7e-26 122.9 126 46.8
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 7.7e-26 122.9 109 49.5
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 7.7e-26 122.9 113 47.8
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 7.7e-26 122.9 112 49.1
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 7.7e-26 122.9 139 42.4
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.0e-25 122.5 110 50.0
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.0e-25 122.5 113 50.4
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.0e-25 122.5 123 44.7
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 1.3e-25 122.1 126 47.6
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 1.3e-25 122.1 129 45.0
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.7e-25 121.7 113 49.6
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.7e-25 121.7 123 44.7
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 1.7e-25 121.7 117 46.2
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 2.9e-25 120.9 124 42.7
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 3.8e-25 120.6 135 45.9
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 3.8e-25 120.6 145 41.4
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 3.8e-25 120.6 115 47.0
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 3.8e-25 120.6 109 49.5
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 3.8e-25 120.6 100 56.0
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 3.8e-25 120.6 126 46.0
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 6.5e-25 119.8 112 47.3
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 8.5e-25 119.4 128 43.8
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 1.1e-24 119.0 138 43.5
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 1.9e-24 118.2 110 49.1
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.9e-24 118.2 135 43.0
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 2.5e-24 117.9 124 43.5
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 4.2e-24 117.1 113 47.8
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 5.5e-24 116.7 110 50.9
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 5.5e-24 116.7 106 49.1
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 5.5e-24 116.7 122 43.4
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 7.2e-24 116.3 126 42.9
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 7.2e-24 116.3 126 42.9
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 9.4e-24 115.9 117 46.2
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 1.2e-23 115.5 136 41.2
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 2.1e-23 114.8 110 48.2
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 2.1e-23 114.8 115 47.8
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 2.7e-23 114.4 154 38.3
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 4.7e-23 113.6 111 47.7
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 8.0e-23 112.8 140 41.4
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 8.0e-23 112.8 106 48.1
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.3e-22 111.3 145 39.3
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 2.3e-22 111.3 93 50.5
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 3.0e-22 110.9 99 53.5
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.1e-21 109.0 117 42.7
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 2.0e-21 108.2 82 57.3
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 7.5e-21 106.3 88 54.5
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 1.8e-19 101.7 88 53.4
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 2.4e-19 101.3 102 48.0
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 2.7e-18 97.8 192 32.8
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 5.9e-18 96.7 85 51.8
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 1.3e-17 95.5 91 49.5
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 5.0e-17 93.6 82 51.2
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 4.2e-16 90.5 85 51.8
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 4.7e-15 87.0 86 44.2
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 8.0e-15 86.3 69 52.2
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 1.0e-14 85.9 80 47.5
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 2.3e-14 84.7 113 39.8
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 3.0e-14 84.3 108 44.4
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 8.8e-14 82.8 64 51.6
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 1.5e-13 82.0 84 44.0
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 1.2e-07 62.4 81 42.0
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 2.1e-07 61.6 85 36.5


User provided reference genes

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