Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 1.5e-90 336.3 178 100.0
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 5.6e-50 201.4 172 60.5
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 2.6e-47 192.6 165 60.0
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 1.3e-46 190.3 165 59.4
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 3.8e-46 188.7 165 61.2
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 4.9e-46 188.3 174 58.6
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 6.4e-46 188.0 165 60.0
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 8.4e-46 187.6 168 57.7
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 8.4e-46 187.6 165 59.4
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 1.2e-44 183.7 170 58.2
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 3.5e-44 182.2 174 56.9
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 4.6e-44 181.8 165 58.2
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 4.6e-44 181.8 172 51.2
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 6.0e-44 181.4 170 56.5
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 1.8e-43 179.9 174 55.7
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 1.8e-43 179.9 170 56.5
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 2.3e-43 179.5 165 58.2
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 2.3e-43 179.5 165 57.0
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 3.0e-43 179.1 174 55.7
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 3.0e-43 179.1 171 55.6
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 3.9e-43 178.7 170 55.3
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 6.7e-43 177.9 174 54.6
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 6.7e-43 177.9 164 57.3
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 6.7e-43 177.9 165 55.2
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 6.7e-43 177.9 170 55.3
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 8.7e-43 177.6 174 55.2
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 8.7e-43 177.6 163 57.1
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 1.1e-42 177.2 165 57.6
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.5e-42 176.8 174 55.2
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 1.5e-42 176.8 166 54.8
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.5e-42 176.8 165 57.0
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.9e-42 176.4 165 55.8
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 2.5e-42 176.0 174 54.6
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 3.3e-42 175.6 165 57.0
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 3.3e-42 175.6 170 54.7
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 4.3e-42 175.3 165 57.0
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 5.6e-42 174.9 175 53.7
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 5.6e-42 174.9 167 55.1
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 7.4e-42 174.5 163 57.1
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 7.4e-42 174.5 165 56.4
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 7.4e-42 174.5 165 55.8
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 9.6e-42 174.1 165 55.8
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 9.6e-42 174.1 170 54.7
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 9.6e-42 174.1 165 55.8
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 9.6e-42 174.1 174 53.4
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.3e-41 173.7 165 55.8
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.3e-41 173.7 165 57.0
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.3e-41 173.7 165 57.0
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 2.1e-41 172.9 167 56.3
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.1e-41 172.9 167 56.3
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 2.1e-41 172.9 165 56.4
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 2.8e-41 172.6 165 55.2
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 3.7e-41 172.2 165 56.4
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 3.7e-41 172.2 174 54.0
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 3.7e-41 172.2 165 55.2
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 3.7e-41 172.2 174 53.4
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 4.8e-41 171.8 165 52.7
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 8.2e-41 171.0 165 52.7
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 1.1e-40 170.6 170 55.3
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.8e-40 169.9 163 55.8
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 2.4e-40 169.5 171 53.8
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 2.4e-40 169.5 170 53.5
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 2.4e-40 169.5 162 54.3
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 5.3e-40 168.3 163 55.8
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 6.9e-40 167.9 163 54.6
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 6.9e-40 167.9 167 53.9
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 9.0e-40 167.5 170 53.5
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 9.0e-40 167.5 174 52.9
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 9.0e-40 167.5 170 53.5
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 9.0e-40 167.5 163 54.0
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 9.0e-40 167.5 170 52.9
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 1.5e-39 166.8 163 55.2
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.0e-39 166.4 173 52.0
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 4.5e-39 165.2 165 53.3
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.7e-38 163.3 196 49.0
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.7e-38 163.3 183 49.7
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 2.2e-38 162.9 150 59.3
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 8.4e-38 161.0 174 50.6
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 1.1e-37 160.6 160 53.8
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 7.1e-37 157.9 149 56.4
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 7.1e-37 157.9 144 56.2
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 9.3e-37 157.5 144 56.9
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 1.2e-36 157.1 150 56.0
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 1.3e-35 153.7 144 54.2
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 4.3e-34 148.7 144 53.5
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 5.7e-34 148.3 150 53.3
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 7.4e-34 147.9 149 52.3
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.3e-33 147.1 165 50.3
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 3.7e-33 145.6 144 54.2
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.4e-32 143.7 134 56.0
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 2.4e-32 142.9 136 55.9
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 3.1e-32 142.5 178 48.9
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 3.1e-32 142.5 136 53.7
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 4.5e-31 138.7 119 61.3
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 7.6e-31 137.9 174 46.6
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 8.5e-30 134.4 178 42.7
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 3.9e-27 125.6 124 54.8
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 1.1e-26 124.0 183 42.6
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.5e-26 123.6 144 50.0
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 3.7e-25 119.0 106 61.3
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 3.7e-25 119.0 110 55.5
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 3.1e-24 115.9 166 41.6
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 3.1e-24 115.9 162 43.2
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.6e-23 112.8 140 49.3
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 6.5e-22 108.2 165 41.8
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 9.4e-21 104.4 109 51.4
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 2.3e-19 99.8 107 54.2
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 6.7e-19 98.2 123 44.7
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 2.6e-18 96.3 88 58.0
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 1.7e-17 93.6 89 53.9
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 3.1e-16 89.4 113 41.6
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 1.5e-15 87.0 86 52.3
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 3.4e-15 85.9 85 56.5
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.3e-14 84.0 107 50.5
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 2.2e-14 83.2 95 46.3
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 3.8e-14 82.4 86 50.0
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.8e-11 73.6 95 43.2
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 4.1e-08 62.4 135 37.0
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 4.1e-08 62.4 43 62.8
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 4.1e-08 62.4 58 53.4
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 9.1e-08 61.2 85 40.0
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 7.7e-07 58.2 86 41.9
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.3e-06 57.4 70 41.4
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.7e-06 57.0 161 29.2
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 3.8e-06 55.8 57 47.4
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 6.5e-06 55.1 63 52.4


User provided reference genes

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