Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38539 Chara braunii HOM05D004837 ORTHO05D005741 0.0e+00 1224.5 743 100.0
SEGI_01686 Sequoiadendron giganteum HOM05D004837 ORTHO05D005741 8.3e-180 634.8 691 54.7
Pp3c3_5600 Physcomitrium patens HOM05D004837 ORTHO05D005741 1.0e-177 627.9 699 52.9
Pp3c25_10040 Physcomitrium patens HOM05D004837 ORTHO05D005741 1.1e-174 617.8 708 53.0
Mapoly0091s0053 Marchantia polymorpha HOM05D004837 ORTHO05D005741 1.4e-174 617.5 696 54.3
ATR0021G039 Amborella trichopoda HOM05D004837 ORTHO05D005741 2.3e-174 616.7 715 53.6
Aqoxy3G03933 Aquilegia oxysepala HOM05D004837 ORTHO05D005741 4.1e-171 605.9 678 51.0
TAR629G1790 Trochodendron aralioides HOM05D004837 ORTHO05D005741 5.4e-171 605.5 678 53.7
Glyma.07G089600 Glycine max HOM05D004837 ORTHO05D005741 1.2e-170 604.4 714 52.4
Gorai.006G062600 Gossypium raimondii HOM05D004837 ORTHO05D005741 1.6e-170 604.0 696 52.6
CSS0007108 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 2.7e-170 603.2 693 50.1
Ciclev10019149m.g Citrus clementina HOM05D004837 ORTHO05D005741 3.5e-170 602.8 678 52.7
Solyc06g069210.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 7.8e-170 601.7 680 53.8
SMO147G0276 Selaginella moellendorffii HOM05D004837 ORTHO05D005741 1.3e-169 600.9 699 51.8
Gohir.D09G047500 Gossypium hirsutum HOM05D004837 ORTHO05D005741 1.7e-169 600.5 696 52.4
Gohir.A09G047000 Gossypium hirsutum HOM05D004837 ORTHO05D005741 2.3e-169 600.1 691 52.5
Manes.01G012900 Manihot esculenta HOM05D004837 ORTHO05D005741 3.0e-169 599.7 676 53.7
Nn4g23774 Nelumbo nucifera HOM05D004837 ORTHO05D005741 3.0e-169 599.7 686 53.6
COL.COLO4_16258 Corchorus olitorius HOM05D004837 ORTHO05D005741 3.9e-169 599.4 676 53.4
CSS0011479 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 5.1e-169 599.0 711 49.1
Eucgr.B00707 Eucalyptus grandis HOM05D004837 ORTHO05D005741 6.6e-169 598.6 687 52.4
Cfa019797 Carpinus fangiana HOM05D004837 ORTHO05D005741 3.3e-168 596.3 698 51.0
arahy.Tifrunner.gnm1.ann1.SIGA6A Arachis hypogaea HOM05D004837 ORTHO05D005741 4.3e-168 595.9 714 51.0
TWI81G0923 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 4.3e-168 595.9 709 51.3
THA.LOC104821845 Tarenaya hassleriana HOM05D004837 ORTHO05D005741 9.5e-168 594.7 702 51.4
CiPaw.15G128500 Carya illinoinensis HOM05D004837 ORTHO05D005741 1.2e-167 594.3 680 51.3
Aa31LG8G5290 Aethionema arabicum HOM05D004837 ORTHO05D005741 4.7e-167 592.4 674 51.9
Glyma.09G187100 Glycine max HOM05D004837 ORTHO05D005741 4.7e-167 592.4 714 51.4
Lalb_Chr22g0352981 Lupinus albus HOM05D004837 ORTHO05D005741 4.7e-167 592.4 680 52.6
EL10Ac5g11426 Beta vulgaris HOM05D004837 ORTHO05D005741 1.1e-166 591.3 681 54.8
AT3G18480 Arabidopsis thaliana HOM05D004837 ORTHO05D005741 1.4e-166 590.9 701 50.2
Atru.chr9.792 Acer truncatum HOM05D004837 ORTHO05D005741 1.8e-166 590.5 678 52.4
Medtr8g103950 Medicago truncatula HOM05D004837 ORTHO05D005741 1.8e-166 590.5 686 50.1
Prupe.8G104400 Prunus persica HOM05D004837 ORTHO05D005741 1.8e-166 590.5 680 52.1
AL3G31770 Arabidopsis lyrata HOM05D004837 ORTHO05D005741 2.3e-166 590.1 701 50.5
HanXRQChr17g0558331 Helianthus annuus HOM05D004837 ORTHO05D005741 2.3e-166 590.1 687 49.8
Lj4g0025474 Lotus japonicus HOM05D004837 ORTHO05D005741 3.1e-166 589.7 697 50.6
Sopen06g026470 Solanum pennellii HOM05D004837 ORTHO05D005741 5.2e-166 589.0 700 52.0
Lsat_1_v5_gn_8_147101 Lactuca sativa HOM05D004837 ORTHO05D005741 6.8e-166 588.6 678 49.9
BcaC05g28614 Brassica carinata HOM05D004837 ORTHO05D005741 8.9e-166 588.2 687 52.5
C05p47190 Brassica napus HOM05D004837 ORTHO05D005741 1.2e-165 587.8 687 52.5
Lj2g0006103 Lotus japonicus HOM05D004837 ORTHO05D005741 1.2e-165 587.8 714 49.6
BolC5t33444H Brassica oleracea HOM05D004837 ORTHO05D005741 1.5e-165 587.4 687 50.9
ECA233G3214 Erigeron canadensis HOM05D004837 ORTHO05D005741 1.5e-165 587.4 678 49.9
Manes.05G138800 Manihot esculenta HOM05D004837 ORTHO05D005741 2.6e-165 586.6 676 51.6
Potri.012G061000 Populus trichocarpa HOM05D004837 ORTHO05D005741 2.6e-165 586.6 676 50.1
Actinidia35081 Actinidia chinensis HOM05D004837 ORTHO05D005741 3.4e-165 586.3 689 49.8
CANSAT80G2884 Cannabis sativa HOM05D004837 ORTHO05D005741 4.4e-165 585.9 681 49.6
Thhalv10020192m.g Eutrema salsugineum HOM05D004837 ORTHO05D005741 4.4e-165 585.9 675 50.8
PSO782G0716 Papaver somniferum HOM05D004837 ORTHO05D005741 5.8e-165 585.5 678 50.3
PSO063G6385 Papaver somniferum HOM05D004837 ORTHO05D005741 1.7e-164 583.9 678 50.1
ClCG03G012520 Citrullus lanatus HOM05D004837 ORTHO05D005741 2.2e-164 583.6 691 49.1
Thecc.03G030500 Theobroma cacao HOM05D004837 ORTHO05D005741 2.9e-164 583.2 696 50.6
BolC1t04537H Brassica oleracea HOM05D004837 ORTHO05D005741 3.8e-164 582.8 675 52.0
CsaV3_1G043510 Cucumis sativus L. HOM05D004837 ORTHO05D005741 3.8e-164 582.8 692 50.4
Sed0018155 Sechium edule HOM05D004837 ORTHO05D005741 3.8e-164 582.8 680 50.6
TWI15G0076 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 6.4e-164 582.0 687 50.2
CSS0025722 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 8.4e-164 581.6 678 50.9
Sp3g16570 Schrenkiella parvula HOM05D004837 ORTHO05D005741 8.4e-164 581.6 692 52.9
Lj5C146T15 Lonicera japonica HOM05D004837 ORTHO05D005741 3.2e-163 579.7 677 50.7
HPP92_013262 Vanilla planifolia HOM05D004837 ORTHO05D005741 4.1e-163 579.3 698 51.6
MD10G1081900 Malus domestica HOM05D004837 ORTHO05D005741 9.2e-163 578.2 680 49.9
Lalb_Chr24g0397611 Lupinus albus HOM05D004837 ORTHO05D005741 7.8e-162 575.1 700 50.4
GSVIVG01008258001 Vitis vinifera HOM05D004837 ORTHO05D005741 1.7e-161 573.9 687 50.4
Sc10g0009510 Simmondsia chinensis HOM05D004837 ORTHO05D005741 3.0e-161 573.2 655 55.0
RcHm_v2.0_Chr7g0184861 Rosa chinensis HOM05D004837 ORTHO05D005741 3.9e-161 572.8 680 51.2
TPR.G21711 Trifolium pratense HOM05D004837 ORTHO05D005741 5.1e-161 572.4 675 51.0
unitig_37.g12022 Utricularia gibba HOM05D004837 ORTHO05D005741 5.1e-161 572.4 681 49.5
Os03g0710900 Oryza sativa ssp. japonica HOM05D004837 ORTHO05D005741 8.6e-161 571.6 702 50.4
Rhsim12G0143900 Rhododendron simsii HOM05D004837 ORTHO05D005741 1.1e-160 571.2 662 50.3
DCAR_004539 Daucus carota HOM05D004837 ORTHO05D005741 1.5e-160 570.9 675 51.6
C01p45740 Brassica napus HOM05D004837 ORTHO05D005741 2.5e-160 570.1 675 51.3
Carub.0003s1824 Capsella rubella HOM05D004837 ORTHO05D005741 2.5e-160 570.1 701 49.6
BcaC09g48805 Brassica carinata HOM05D004837 ORTHO05D005741 3.3e-160 569.7 675 51.3
arahy.Tifrunner.gnm1.ann1.71FAZ0 Arachis hypogaea HOM05D004837 ORTHO05D005741 4.3e-160 569.3 743 47.1
CARHR093830 Cardamine hirsuta HOM05D004837 ORTHO05D005741 4.3e-160 569.3 701 49.8
arahy.Tifrunner.gnm1.ann1.7R0LHH Arachis hypogaea HOM05D004837 ORTHO05D005741 5.6e-160 568.9 743 47.1
vmacro16451 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 5.6e-160 568.9 744 46.6
Peaxi162Scf00013g00943 Petunia axillaris HOM05D004837 ORTHO05D005741 1.2e-159 567.8 662 50.3
BcaB06g25891 Brassica carinata HOM05D004837 ORTHO05D005741 4.7e-159 565.8 687 51.7
Duzib084G1378 Durio zibethinus HOM05D004837 ORTHO05D005741 4.7e-159 565.8 696 51.7
vmacro23526 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 4.7e-159 565.8 744 46.4
BcaB04g20769 Brassica carinata HOM05D004837 ORTHO05D005741 8.1e-159 565.1 675 51.0
A01p35930 Brassica napus HOM05D004837 ORTHO05D005741 1.4e-158 564.3 675 51.7
Ca_25454_v3 Cicer arietinum L. HOM05D004837 ORTHO05D005741 1.4e-158 564.3 696 47.7
QL10p023827 Quercus lobata HOM05D004837 ORTHO05D005741 1.8e-158 563.9 676 50.9
Phvul.004G160100 Phaseolus vulgaris HOM05D004837 ORTHO05D005741 3.1e-158 563.1 716 49.6
Migut.M00003 Erythranthe guttata HOM05D004837 ORTHO05D005741 5.2e-158 562.4 680 52.2
A05p31170 Brassica napus HOM05D004837 ORTHO05D005741 2.0e-157 560.5 687 51.4
BraA05t21958Z Brassica rapa HOM05D004837 ORTHO05D005741 2.0e-157 560.5 687 51.4
MSTRG.14939 Avicennia marina HOM05D004837 ORTHO05D005741 2.9e-156 556.6 696 50.3
FAN08G2631 Fragaria x ananassa HOM05D004837 ORTHO05D005741 6.4e-156 555.4 680 49.3
Ah.02g115350 Amaranthus hybridus HOM05D004837 ORTHO05D005741 8.4e-156 555.1 681 51.7
CDE11G0344 Ceratophyllum demersum HOM05D004837 ORTHO05D005741 2.4e-155 553.5 664 50.5
AUR62025880 Chenopodium quinoa HOM05D004837 ORTHO05D005741 3.2e-155 553.1 682 52.2
AUR62029852 Chenopodium quinoa HOM05D004837 ORTHO05D005741 3.2e-155 553.1 682 51.9
Cc04_g07300 Coffea canephora HOM05D004837 ORTHO05D005741 3.2e-155 553.1 702 52.1
BraA01t03672Z Brassica rapa HOM05D004837 ORTHO05D005741 1.6e-154 550.8 672 51.0
PGR083G0937 Punica granatum HOM05D004837 ORTHO05D005741 2.7e-154 550.1 676 53.3
Cpa.g.sc13.20 Carica papaya HOM05D004837 ORTHO05D005741 3.5e-154 549.7 680 50.0
Zm00001eb216420 Zea mays HOM05D004837 ORTHO05D005741 4.6e-154 549.3 676 50.9
SGA_v2.0_scaffold10G05151 Striga asiatica HOM05D004837 ORTHO05D005741 7.8e-154 548.5 699 48.6
FAN04G0597 Fragaria x ananassa HOM05D004837 ORTHO05D005741 2.3e-153 547.0 680 50.1
FvH4_5g12492 Fragaria vesca HOM05D004837 ORTHO05D005741 3.9e-153 546.2 680 47.9
FAN18G2885 Fragaria x ananassa HOM05D004837 ORTHO05D005741 1.5e-152 544.3 680 47.8
VMungo0464G1696 Vigna mungo HOM05D004837 ORTHO05D005741 8.1e-151 538.5 714 49.0
Sabra12G0044300 Salix brachista HOM05D004837 ORTHO05D005741 3.1e-150 536.6 685 47.2
MBI13_g10043_MAGBIO Magnolia biondii HOM05D004837 ORTHO05D005741 1.5e-149 534.3 672 49.0
Nitab4.5_0001599g0070 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.3e-148 531.2 720 47.2
Nitab4.5_0010565g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.1e-147 528.1 724 45.7
FAN18G2415 Fragaria x ananassa HOM05D004837 ORTHO05D005741 6.7e-145 518.8 729 45.1
arahy.Tifrunner.gnm1.ann1.9R3N8Z Arachis hypogaea HOM05D004837 ORTHO05D005741 3.7e-143 513.1 639 50.4
Hund02403 Selenicereus undatus HOM05D004837 ORTHO05D005741 1.8e-142 510.8 637 51.2
Nitab4.5_0008699g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 8.2e-135 485.3 700 44.9
Nitab4.5_0001432g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 3.1e-134 483.4 724 43.8
Dinv40420 Davidia involucrata HOM05D004837 ORTHO05D005741 7.6e-133 478.8 590 49.2
Haze_18623 Corylus avellana HOM05D004837 ORTHO05D005741 7.6e-125 452.2 1048 33.0
Psat7g012560 Pisum sativum HOM05D004837 ORTHO05D005741 4.5e-117 426.4 557 47.6
Oeu016160.3 Olea europaea HOM05D004837 ORTHO05D005741 1.1e-112 411.8 734 41.7
AagrBONN_evm.TU.Sc2ySwM_228.1000 Anthoceros agrestis HOM05D004837 ORTHO05D005741 8.5e-100 369.0 596 44.5
PGSC0003DMG400004053 Solanum tuberosum HOM05D004837 ORTHO05D005741 1.2e-98 365.2 415 54.5
MELO3C015107.2 Cucumis melo HOM05D004837 ORTHO05D005741 3.8e-92 343.6 403 52.6
HPP92_013216 Vanilla planifolia HOM05D004837 ORTHO05D005741 1.2e-88 332.0 366 50.5
Actinidia31023 Actinidia chinensis HOM05D004837 ORTHO05D005741 1.6e-82 311.6 389 46.0
Cre08.g382650 Chlamydomonas reinhardtii HOM05D004837 ORTHO05D005741 2.4e-78 297.7 720 37.1
CAN.G423.1 Capsicum annuum HOM05D004837 ORTHO05D005741 6.6e-60 236.5 382 43.2
HPP92_013215 Vanilla planifolia HOM05D004837 ORTHO05D005741 1.2e-56 225.7 257 53.7
Atru.chr9.1054 Acer truncatum HOM05D004837 ORTHO05D005741 1.0e-44 186.0 494 33.6
Atru.chr9.1055 Acer truncatum HOM05D004837 ORTHO05D005741 4.3e-43 180.6 498 32.7
PRCOL_00005675 Prasinoderma coloniale HOM05D004837 ORTHO05D005741 2.1e-34 151.8 662 28.9
Gohir.D12G266250 Gossypium hirsutum HOM05D004837 ORTHO05D005741 1.5e-32 145.6 132 59.1
SHI30382 Sapria himalayana HOM05D004837 ORTHO05D005741 4.5e-32 144.1 109 69.7
CAN.G587.83 Capsicum annuum HOM05D004837 ORTHO05D005741 1.3e-31 142.5 125 59.2
MELO3C029547.2 Cucumis melo HOM05D004837 ORTHO05D005741 3.8e-31 141.0 167 47.3
Gorai.008G286000 Gossypium raimondii HOM05D004837 ORTHO05D005741 3.3e-27 127.9 138 53.6
Cfa021462 Carpinus fangiana HOM05D004837 ORTHO05D005741 5.6e-27 127.1 732 22.1
Nitab4.5_0010701g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 2.4e-25 121.7 94 66.0
Ah.11g042150 Amaranthus hybridus HOM05D004837 ORTHO05D005741 1.5e-19 102.4 89 62.9
MCO10G228 Micromonas commoda HOM05D004837 ORTHO05D005741 4.0e-17 94.4 723 23.4
Prupe.8G103800 Prunus persica HOM05D004837 ORTHO05D005741 1.2e-13 82.8 154 39.0
Cre04.g223900 Chlamydomonas reinhardtii HOM05D004837 ORTHO05D005741 1.3e-10 72.8 774 21.3
Hund02405 Selenicereus undatus HOM05D004837 ORTHO05D005741 9.4e-06 56.6 28 89.3


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