Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38482 Chara braunii HOM05D003560 ORTHO05D004500 0.0e+00 2655.2 1471 100.0
CBR_g55388 Chara braunii HOM05D003560 ORTHO05D004500 0.0e+00 1976.4 1333 80.1
Pp3c22_15890 Physcomitrium patens HOM05D003560 ORTHO05D004500 1.1e-180 638.6 1354 36.1
Pp3c19_12090 Physcomitrium patens HOM05D003560 ORTHO05D004500 8.8e-173 612.5 1344 34.7
Aqoxy7G03346 Aquilegia oxysepala HOM05D003560 ORTHO05D004500 4.8e-155 553.5 1353 33.0
PSO782G3416 Papaver somniferum HOM05D003560 ORTHO05D004500 9.1e-154 549.3 1351 31.9
SMO301G0012 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 1.2e-153 548.9 1338 32.7
PSO063G7271 Papaver somniferum HOM05D003560 ORTHO05D004500 6.5e-152 543.1 1350 31.6
Atru.chr7.14 Acer truncatum HOM05D003560 ORTHO05D004500 8.5e-152 542.7 1340 32.6
Mapoly0041s0089 Marchantia polymorpha HOM05D003560 ORTHO05D004500 1.2e-148 532.3 1331 33.6
ATR0749G018 Amborella trichopoda HOM05D003560 ORTHO05D004500 4.4e-148 530.4 1342 31.9
Thecc.09G153600 Theobroma cacao HOM05D003560 ORTHO05D004500 1.1e-146 525.8 1347 31.9
TAR625G0571 Trochodendron aralioides HOM05D003560 ORTHO05D004500 2.4e-146 524.6 1355 32.3
MELO3C004116.2 Cucumis melo HOM05D003560 ORTHO05D004500 3.5e-145 520.8 1338 31.5
MD04G1049500 Malus domestica HOM05D003560 ORTHO05D004500 4.5e-145 520.4 1348 31.2
TAR636G2626 Trochodendron aralioides HOM05D003560 ORTHO05D004500 5.9e-145 520.0 1349 32.1
CiPaw.16G106900 Carya illinoinensis HOM05D003560 ORTHO05D004500 1.3e-144 518.8 1344 31.5
PGSC0003DMG400011153 Solanum tuberosum HOM05D003560 ORTHO05D004500 6.5e-144 516.5 1343 31.8
Haze_19142 Corylus avellana HOM05D003560 ORTHO05D004500 1.5e-143 515.4 1350 32.4
SalBow1G5562 Salvia bowleyana HOM05D003560 ORTHO05D004500 1.5e-143 515.4 1351 31.2
Nitab4.5_0006744g0010 Nicotiana tabacum HOM05D003560 ORTHO05D004500 2.5e-143 514.6 1336 31.7
Nitab4.5_0001036g0120 Nicotiana tabacum HOM05D003560 ORTHO05D004500 5.5e-143 513.5 1339 31.4
Sopen07g002100 Solanum pennellii HOM05D003560 ORTHO05D004500 9.4e-143 512.7 1345 32.0
Nn2g14025 Nelumbo nucifera HOM05D003560 ORTHO05D004500 1.2e-142 512.3 1356 31.9
Manes.06G031700 Manihot esculenta HOM05D003560 ORTHO05D004500 2.1e-142 511.5 1349 31.6
Solyc07g005970.3 Solanum lycopersicum HOM05D003560 ORTHO05D004500 2.7e-142 511.1 1347 32.1
Duzib168G0378 Durio zibethinus HOM05D003560 ORTHO05D004500 3.6e-142 510.8 1357 31.6
Migut.J01389 Erythranthe guttata HOM05D003560 ORTHO05D004500 3.6e-142 510.8 1341 31.0
RcHm_v2.0_Chr4g0405611 Rosa chinensis HOM05D003560 ORTHO05D004500 4.7e-142 510.4 1346 31.4
Gohir.D05G008900 Gossypium hirsutum HOM05D003560 ORTHO05D004500 8.0e-142 509.6 1350 31.4
Prupe.1G102400 Prunus persica HOM05D003560 ORTHO05D004500 1.0e-141 509.2 1347 31.6
Gorai.009G009100 Gossypium raimondii HOM05D003560 ORTHO05D004500 1.8e-141 508.4 1348 31.2
Hma1.2p1_0222F.1_g093890 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.8e-141 508.4 1344 30.7
Gohir.A05G008100 Gossypium hirsutum HOM05D003560 ORTHO05D004500 3.0e-141 507.7 1348 31.2
ClCG02G014310 Citrullus lanatus HOM05D003560 ORTHO05D004500 5.2e-141 506.9 1338 30.9
Ciclev10007284m.g Citrus clementina HOM05D003560 ORTHO05D004500 5.2e-141 506.9 1348 32.1
Dinv42820 Davidia involucrata HOM05D003560 ORTHO05D004500 6.8e-141 506.5 1349 31.4
Dinv43280 Davidia involucrata HOM05D003560 ORTHO05D004500 6.8e-141 506.5 1349 31.4
vmacro13051 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 6.8e-141 506.5 1334 31.6
arahy.Tifrunner.gnm1.ann1.752C0V Arachis hypogaea HOM05D003560 ORTHO05D004500 8.8e-141 506.1 1326 32.0
FAN12G4167 Fragaria x ananassa HOM05D003560 ORTHO05D004500 8.8e-141 506.1 1352 30.7
CANSAT11G0384 Cannabis sativa HOM05D003560 ORTHO05D004500 1.5e-140 505.4 1360 31.3
Dinv41343 Davidia involucrata HOM05D003560 ORTHO05D004500 1.5e-140 505.4 1340 30.7
FAN22G1868 Fragaria x ananassa HOM05D003560 ORTHO05D004500 1.5e-140 505.4 1352 31.1
Nn8g40053 Nelumbo nucifera HOM05D003560 ORTHO05D004500 1.5e-140 505.4 1112 33.8
Sed0019076 Sechium edule HOM05D003560 ORTHO05D004500 1.5e-140 505.4 1344 30.6
SEGI_31223 Sequoiadendron giganteum HOM05D003560 ORTHO05D004500 2.6e-140 504.6 1340 32.0
AagrBONN_evm.TU.Sc2ySwM_344.4294 Anthoceros agrestis HOM05D003560 ORTHO05D004500 3.4e-140 504.2 1343 31.7
Cfa020786 Carpinus fangiana HOM05D003560 ORTHO05D004500 4.4e-140 503.8 1352 31.9
FvH4_4g10150 Fragaria vesca HOM05D003560 ORTHO05D004500 5.7e-140 503.4 1351 30.7
Cc06_g14510 Coffea canephora HOM05D003560 ORTHO05D004500 7.5e-140 503.1 1343 30.9
MSTRG.19664 Avicennia marina HOM05D003560 ORTHO05D004500 6.3e-139 500.0 1344 30.5
Peaxi162Scf00563g00417 Petunia axillaris HOM05D003560 ORTHO05D004500 8.3e-139 499.6 1348 31.3
FAN12G2950 Fragaria x ananassa HOM05D003560 ORTHO05D004500 1.4e-138 498.8 1346 30.7
Glyma.02G206500 Glycine max HOM05D003560 ORTHO05D004500 2.4e-138 498.0 1342 31.4
Sed0017470 Sechium edule HOM05D003560 ORTHO05D004500 9.1e-138 496.1 1347 31.1
DCAR_009892 Daucus carota HOM05D003560 ORTHO05D004500 1.2e-137 495.7 1335 30.6
Hund08956 Selenicereus undatus HOM05D003560 ORTHO05D004500 2.0e-137 495.0 1347 30.6
CAN.G1190.4 Capsicum annuum HOM05D003560 ORTHO05D004500 2.7e-137 494.6 1352 31.7
Lalb_Chr12g0198821 Lupinus albus HOM05D003560 ORTHO05D004500 4.5e-137 493.8 1338 30.8
FAN17G2275 Fragaria x ananassa HOM05D003560 ORTHO05D004500 7.7e-137 493.0 1351 30.3
SGA_v2.0_scaffold265G46080 Striga asiatica HOM05D003560 ORTHO05D004500 1.7e-136 491.9 1363 30.9
Glyma.17G071400 Glycine max HOM05D003560 ORTHO05D004500 2.9e-136 491.1 1338 30.9
Potri.018G103000 Populus trichocarpa HOM05D003560 ORTHO05D004500 5.0e-136 490.3 1338 30.7
Rhsim01G0023800 Rhododendron simsii HOM05D003560 ORTHO05D004500 6.6e-136 490.0 1332 31.3
MD13G1257100 Malus domestica HOM05D003560 ORTHO05D004500 9.5e-135 486.1 1342 31.1
QL02p094176 Quercus lobata HOM05D003560 ORTHO05D004500 2.1e-134 485.0 1349 31.0
Eucgr.C00241 Eucalyptus grandis HOM05D003560 ORTHO05D004500 8.0e-134 483.0 1340 30.4
FAN07G0247 Fragaria x ananassa HOM05D003560 ORTHO05D004500 8.0e-134 483.0 1371 30.3
Lj4g0007617 Lotus japonicus HOM05D003560 ORTHO05D004500 8.0e-134 483.0 1345 30.3
Sc14g0000980 Simmondsia chinensis HOM05D003560 ORTHO05D004500 8.0e-134 483.0 1143 31.9
THA.LOC104803909 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 4.0e-133 480.7 1336 30.1
TPR.G24844 Trifolium pratense HOM05D003560 ORTHO05D004500 5.2e-133 480.3 1339 29.8
Phvul.003G153800 Phaseolus vulgaris HOM05D003560 ORTHO05D004500 1.5e-132 478.8 1347 30.8
AUR62028380 Chenopodium quinoa HOM05D003560 ORTHO05D004500 2.0e-132 478.4 1341 30.4
Ca_21152_v3 Cicer arietinum L. HOM05D003560 ORTHO05D004500 2.0e-132 478.4 1338 30.2
Medtr4g130370 Medicago truncatula HOM05D003560 ORTHO05D004500 2.0e-132 478.4 1339 29.4
VMungo1215G0464 Vigna mungo HOM05D003560 ORTHO05D004500 2.6e-132 478.0 1346 30.3
Duzib150G1559 Durio zibethinus HOM05D003560 ORTHO05D004500 5.7e-132 476.9 1347 30.5
Os02g0179800 Oryza sativa ssp. japonica HOM05D003560 ORTHO05D004500 5.7e-132 476.9 1336 31.4
PGR102G2861 Punica granatum HOM05D003560 ORTHO05D004500 7.5e-132 476.5 1337 30.5
CiPaw.15G164500 Carya illinoinensis HOM05D003560 ORTHO05D004500 1.3e-131 475.7 1347 31.0
HanXRQChr12g0357781 Helianthus annuus HOM05D003560 ORTHO05D004500 1.3e-131 475.7 1259 30.2
Cpa.g.sc199.20 Carica papaya HOM05D003560 ORTHO05D004500 1.7e-131 475.3 1221 31.5
EL10Ac8g18909 Beta vulgaris HOM05D003560 ORTHO05D004500 2.2e-131 474.9 1337 29.8
Lalb_Chr13g0300691 Lupinus albus HOM05D003560 ORTHO05D004500 2.2e-131 474.9 1340 30.4
GSVIVG01023682001 Vitis vinifera HOM05D003560 ORTHO05D004500 4.9e-131 473.8 1343 29.6
ECA234G2881 Erigeron canadensis HOM05D003560 ORTHO05D004500 1.1e-130 472.6 1334 28.4
CARHR238630 Cardamine hirsuta HOM05D003560 ORTHO05D004500 1.4e-130 472.2 1339 30.2
MBI14_g31376_MAGBIO Magnolia biondii HOM05D003560 ORTHO05D004500 1.8e-130 471.9 681 41.0
BcaNung04829 Brassica carinata HOM05D003560 ORTHO05D004500 1.2e-129 469.2 1336 29.8
Carub.0007s0981 Capsella rubella HOM05D003560 ORTHO05D004500 1.2e-129 469.2 1341 29.8
PGR114G0002 Punica granatum HOM05D003560 ORTHO05D004500 1.2e-129 469.2 1358 30.0
PGR142G1236 Punica granatum HOM05D003560 ORTHO05D004500 1.2e-129 469.2 1358 30.0
Duzib187G1514 Durio zibethinus HOM05D003560 ORTHO05D004500 7.8e-129 466.5 1350 30.0
unitig_37.g12751 Utricularia gibba HOM05D003560 ORTHO05D004500 5.0e-128 463.8 1357 29.2
Lj9A721G57 Lonicera japonica HOM05D003560 ORTHO05D004500 6.6e-128 463.4 1349 30.2
HanXRQChr10g0307611 Helianthus annuus HOM05D003560 ORTHO05D004500 8.6e-128 463.0 1334 28.9
A03p60310 Brassica napus HOM05D003560 ORTHO05D004500 1.5e-127 462.2 1332 30.3
Lsat_1_v5_gn_8_64740 Lactuca sativa HOM05D003560 ORTHO05D004500 2.5e-127 461.5 1259 30.9
BraA01t00687Z Brassica rapa HOM05D003560 ORTHO05D004500 3.3e-127 461.1 1338 29.7
CSS0046771 Camellia sinensis var. sinensis HOM05D003560 ORTHO05D004500 3.3e-127 461.1 1341 30.7
Psat7g006640 Pisum sativum HOM05D003560 ORTHO05D004500 5.6e-127 460.3 1342 29.1
THA.LOC104815517 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 1.2e-126 459.1 1332 30.3
Thhalv10024256m.g Eutrema salsugineum HOM05D003560 ORTHO05D004500 1.6e-126 458.8 1336 30.0
A01p07380 Brassica napus HOM05D003560 ORTHO05D004500 2.1e-126 458.4 1338 29.6
Rhsim03G0259200 Rhododendron simsii HOM05D003560 ORTHO05D004500 2.1e-126 458.4 1264 31.5
BcaNung01560 Brassica carinata HOM05D003560 ORTHO05D004500 3.6e-126 457.6 1340 29.5
HanXRQChr05g0141571 Helianthus annuus HOM05D003560 ORTHO05D004500 3.6e-126 457.6 1337 29.5
arahy.Tifrunner.gnm1.ann1.IP23DV Arachis hypogaea HOM05D003560 ORTHO05D004500 4.7e-126 457.2 665 39.5
ECA236G1776 Erigeron canadensis HOM05D003560 ORTHO05D004500 4.7e-126 457.2 1336 29.6
SalBow1G1777 Salvia bowleyana HOM05D003560 ORTHO05D004500 4.7e-126 457.2 1340 29.9
TWI32G0440 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 8.0e-126 456.4 1341 30.1
Ah.09g228690 Amaranthus hybridus HOM05D003560 ORTHO05D004500 1.0e-125 456.1 1334 29.5
BcaC09g51868 Brassica carinata HOM05D003560 ORTHO05D004500 1.0e-125 456.1 1339 29.2
BolC1t00801H Brassica oleracea HOM05D003560 ORTHO05D004500 1.8e-125 455.3 1339 29.2
BraA03t15073Z Brassica rapa HOM05D003560 ORTHO05D004500 1.8e-125 455.3 1333 29.9
Potri.006G180800 Populus trichocarpa HOM05D003560 ORTHO05D004500 5.2e-125 453.8 1350 29.6
C01p08140 Brassica napus HOM05D003560 ORTHO05D004500 6.8e-125 453.4 1340 29.1
Sabra06G0137800 Salix brachista HOM05D003560 ORTHO05D004500 6.8e-125 453.4 1334 29.5
SGA_v2.0_scaffold45G17008 Striga asiatica HOM05D003560 ORTHO05D004500 1.5e-124 452.2 1350 28.6
MBI14_g08698_MAGBIO Magnolia biondii HOM05D003560 ORTHO05D004500 2.0e-124 451.8 773 38.3
AT4G30790 Arabidopsis thaliana HOM05D003560 ORTHO05D004500 7.5e-124 449.9 1340 29.3
A08p19080 Brassica napus HOM05D003560 ORTHO05D004500 2.9e-123 448.0 1346 29.2
BcaC01g01140 Brassica carinata HOM05D003560 ORTHO05D004500 7.0e-122 443.4 1345 29.4
BolC3t21162H Brassica oleracea HOM05D003560 ORTHO05D004500 7.0e-122 443.4 1345 29.4
Sp7g28660 Schrenkiella parvula HOM05D003560 ORTHO05D004500 2.7e-121 441.4 1343 29.0
C03p88520 Brassica napus HOM05D003560 ORTHO05D004500 4.6e-121 440.7 1345 29.3
Aa31LG2G19610 Aethionema arabicum HOM05D003560 ORTHO05D004500 1.0e-120 439.5 1333 28.1
THA.LOC104803549 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 2.3e-120 438.3 1341 28.5
CDE02G1528 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 3.0e-120 438.0 1349 28.7
BcaNung02741 Brassica carinata HOM05D003560 ORTHO05D004500 4.3e-119 434.1 1262 29.1
C07p58220 Brassica napus HOM05D003560 ORTHO05D004500 4.3e-119 434.1 1269 29.3
AUR62025371 Chenopodium quinoa HOM05D003560 ORTHO05D004500 1.2e-118 432.6 1254 29.7
Ah.14g084380 Amaranthus hybridus HOM05D003560 ORTHO05D004500 2.1e-118 431.8 667 37.6
BolC7t46280H Brassica oleracea HOM05D003560 ORTHO05D004500 3.6e-118 431.0 1288 29.0
BraA08t33870Z Brassica rapa HOM05D003560 ORTHO05D004500 4.7e-118 430.6 1346 28.8
TWI34G0709 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 1.4e-117 429.1 1306 29.9
Zm00001eb206680 Zea mays HOM05D003560 ORTHO05D004500 3.4e-116 424.5 1334 29.5
Zm00001eb233940 Zea mays HOM05D003560 ORTHO05D004500 1.7e-115 422.2 1337 28.9
HPP92_021904 Vanilla planifolia HOM05D003560 ORTHO05D004500 2.2e-115 421.8 1117 31.0
CsaV3_2G007690 Cucumis sativus L. HOM05D003560 ORTHO05D004500 3.7e-115 421.0 1219 30.2
Lsat_1_v5_gn_5_89080 Lactuca sativa HOM05D003560 ORTHO05D004500 3.7e-115 421.0 1279 28.2
Hma1.2p1_1084F.1_g255280 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 7.8e-113 413.3 1346 28.9
DCAR_020090 Daucus carota HOM05D003560 ORTHO05D004500 1.7e-112 412.1 1337 28.7
vmacro06053 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 2.5e-111 408.3 1257 28.8
AL7G21340 Arabidopsis lyrata HOM05D003560 ORTHO05D004500 8.9e-109 399.8 1340 27.3
SMO361G0456 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 9.9e-108 396.4 1257 28.6
SMO361G0185 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 1.9e-106 392.1 1257 28.5
Sabra18G0088600 Salix brachista HOM05D003560 ORTHO05D004500 1.6e-105 389.0 1335 28.2
Oeu024893.2 Olea europaea HOM05D003560 ORTHO05D004500 8.1e-102 376.7 592 36.5
Hma1.2p1_0222F.1_g093876 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 6.9e-93 347.1 592 35.3
Hma1.2p1_0222F.1_g093910 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 6.9e-93 347.1 592 35.3
COL.COLO4_05033 Corchorus olitorius HOM05D003560 ORTHO05D004500 2.8e-78 298.5 1093 29.3
Actinidia24369 Actinidia chinensis HOM05D003560 ORTHO05D004500 6.9e-77 293.9 357 42.0
MCO10G226 Micromonas commoda HOM05D003560 ORTHO05D004500 1.1e-74 286.6 731 31.3
Cre16.g651350 Chlamydomonas reinhardtii HOM05D003560 ORTHO05D004500 1.5e-71 276.2 565 32.6
Actinidia20936 Actinidia chinensis HOM05D003560 ORTHO05D004500 1.9e-71 275.8 1069 28.0
PRCOL_00000855 Prasinoderma coloniale HOM05D003560 ORTHO05D004500 1.9e-71 275.8 545 33.2
COL.COLO4_05032 Corchorus olitorius HOM05D003560 ORTHO05D004500 1.5e-63 249.6 280 43.9
CDE05G3326 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 5.3e-53 214.5 407 35.4
Manes.14G113300 Manihot esculenta HOM05D003560 ORTHO05D004500 1.5e-52 213.0 280 37.5
Migut.K00302 Erythranthe guttata HOM05D003560 ORTHO05D004500 3.1e-29 135.6 214 36.0
vmacro06070 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 1.3e-14 87.0 257 33.5
Hma1.2p1_0222F.1_g093900 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.1e-13 84.0 115 46.1
Zm00001eb234440 Zea mays HOM05D003560 ORTHO05D004500 2.7e-12 79.3 116 43.1
Zm00001eb400070 Zea mays HOM05D003560 ORTHO05D004500 3.5e-12 79.0 106 46.2
Zm00001eb257740 Zea mays HOM05D003560 ORTHO05D004500 5.2e-08 65.1 111 42.3
Zm00001eb110220 Zea mays HOM05D003560 ORTHO05D004500 2.0e-07 63.2 106 41.5
C03p39530 Brassica napus HOM05D003560 ORTHO05D021703 4.4e-07 62.0 121 32.2
RcHm_v2.0_Chr5g0033091 Rosa chinensis HOM05D003560 ORTHO05D004500 5.8e-07 61.6 87 42.5
VMungo1127G1083 Vigna mungo HOM05D003560 ORTHO05D021703 7.5e-07 61.2 121 33.9
C03p39520 Brassica napus HOM05D003560 ORTHO05D021703 6.4e-06 58.2 121 31.4


User provided reference genes

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