Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38478 Chara braunii HOM05D004666 ORTHO05D005822 0.0e+00 1758.0 997 100.0
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 3.8e-55 221.1 628 28.5
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 5.0e-55 220.7 644 26.9
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 9.5e-54 216.5 661 28.4
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 1.6e-53 215.7 634 29.7
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 2.1e-53 215.3 264 42.0
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 2.1e-53 215.3 632 28.8
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 4.7e-53 214.2 283 40.6
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 6.1e-53 213.8 624 29.0
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 6.1e-53 213.8 264 42.4
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 8.0e-53 213.4 315 37.8
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 1.8e-52 212.2 264 42.0
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 5.2e-52 210.7 264 42.0
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 6.8e-52 210.3 273 41.0
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 6.8e-52 210.3 264 42.0
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 6.8e-52 210.3 649 26.7
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 2.0e-51 208.8 627 30.5
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 5.7e-51 207.2 670 30.0
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 7.5e-51 206.8 633 28.8
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 7.5e-51 206.8 264 41.7
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 9.8e-51 206.5 262 40.8
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 1.7e-50 205.7 642 28.8
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 2.9e-50 204.9 624 30.0
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 3.7e-50 204.5 629 28.3
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 6.4e-50 203.8 649 27.7
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 8.3e-50 203.4 636 28.8
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 8.3e-50 203.4 633 30.0
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 8.3e-50 203.4 655 27.0
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 1.1e-49 203.0 658 28.6
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 1.4e-49 202.6 261 42.1
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.8e-49 202.2 666 28.4
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 1.8e-49 202.2 264 41.3
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 3.2e-49 201.4 646 28.6
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 3.2e-49 201.4 269 38.7
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 4.1e-49 201.1 633 28.0
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 7.0e-49 200.3 649 29.9
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 9.2e-49 199.9 635 29.1
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 1.6e-48 199.1 646 28.6
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 4.6e-48 197.6 627 29.3
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 4.6e-48 197.6 627 29.3
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 5.9e-48 197.2 262 40.5
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 7.8e-48 196.8 626 29.2
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 7.8e-48 196.8 262 40.8
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 1.0e-47 196.4 646 29.1
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 1.3e-47 196.1 262 40.5
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 1.7e-47 195.7 628 29.1
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 2.3e-47 195.3 262 40.1
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 2.3e-47 195.3 641 29.3
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 3.0e-47 194.9 653 28.0
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 3.9e-47 194.5 651 28.0
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 5.0e-47 194.1 262 40.5
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 1.5e-46 192.6 637 29.4
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 1.5e-46 192.6 656 27.0
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 3.3e-46 191.4 262 38.5
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 3.3e-46 191.4 638 26.6
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 5.6e-46 190.7 659 27.8
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 1.2e-45 189.5 638 27.6
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 2.8e-45 188.3 678 26.4
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 2.8e-45 188.3 262 38.2
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 4.7e-45 187.6 266 39.5
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 8.0e-45 186.8 704 26.4
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 1.8e-44 185.7 285 36.5
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 4.0e-44 184.5 688 26.5
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 6.8e-44 183.7 249 37.8
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 8.9e-44 183.3 270 36.7
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 1.2e-43 183.0 635 27.1
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 2.6e-43 181.8 247 41.3
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 3.4e-43 181.4 262 37.8
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 5.8e-43 180.6 262 37.4
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 1.3e-42 179.5 270 36.3
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 1.3e-42 179.5 661 26.3
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 4.9e-42 177.6 265 38.1
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 1.4e-41 176.0 260 37.3
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 5.4e-41 174.1 648 27.2
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 9.2e-41 173.3 262 36.6
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 1.2e-40 172.9 266 36.8
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 1.2e-40 172.9 264 37.1
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 2.0e-40 172.2 262 37.0
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 4.6e-40 171.0 269 36.4
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 1.0e-39 169.9 665 26.5
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 1.3e-39 169.5 710 25.6
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 1.3e-39 169.5 710 25.6
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 1.7e-39 169.1 263 37.6
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 1.7e-39 169.1 694 23.3
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 2.3e-39 168.7 682 26.7
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 2.3e-39 168.7 262 36.3
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 2.3e-39 168.7 270 35.9
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 5.0e-39 167.5 632 26.9
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 5.0e-39 167.5 307 34.5
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 8.6e-39 166.8 676 26.3
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 8.6e-39 166.8 175 47.4
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 1.9e-38 165.6 660 26.4
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.1e-37 162.2 167 49.7
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 8.1e-37 160.2 673 26.7
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 1.4e-36 159.5 634 26.5
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 3.1e-36 158.3 645 24.8
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 4.4e-35 154.5 265 34.7
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 5.8e-35 154.1 264 36.4
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 1.3e-34 152.9 666 24.8
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.7e-34 152.5 228 38.2
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 2.9e-34 151.8 675 25.3
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 4.9e-34 151.0 694 24.4
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 4.1e-33 147.9 265 33.2
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 5.4e-33 147.5 232 37.1
Cpa.g.sc5.49 Carica papaya HOM05D004666 ORTHO05D005822 2.1e-32 145.6 145 49.0
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 6.0e-32 144.1 287 32.1
SEGI_09998 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 7.8e-32 143.7 131 51.1
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 1.0e-31 143.3 561 26.9
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 1.5e-30 139.4 265 32.5
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.3e-30 137.9 232 35.8
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 1.2e-29 136.3 260 31.9
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 1.1e-28 133.3 167 41.9
ATR0820G266 Amborella trichopoda HOM05D004666 ORTHO05D005822 3.8e-26 124.8 120 46.7
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 3.2e-25 121.7 677 24.1
Hma1.2p1_2087F.1_g313760 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 3.3e-22 111.7 136 43.4
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 2.5e-14 85.5 86 50.0
Hma1.2p1_2087F.1_g313780 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 4.9e-10 71.2 121 33.9
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 1.4e-09 69.7 121 36.4
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 3.2e-09 68.6 109 37.6
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 7.1e-09 67.4 96 35.4
Hma1.2p1_0084F.1_g043490 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 7.1e-09 67.4 116 36.2
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 9.3e-09 67.0 561 23.7
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.5e-08 65.1 65 43.1
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 7.9e-08 63.9 68 44.1
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.0e-07 63.5 65 41.5
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 3.9e-07 61.6 65 43.1
Haze_16425 Corylus avellana HOM05D004666 ORTHO05D005822 6.7e-07 60.8 126 32.5
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.1e-06 60.1 68 44.1


User provided reference genes

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