Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 1.6e-160 569.3 275 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 8.4e-37 158.3 95 67.4
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 1.9e-36 157.1 90 71.1
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 3.5e-35 152.9 156 47.4
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 3.3e-33 146.4 104 58.7
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 1.1e-31 141.4 95 67.4
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 6.9e-31 138.7 95 64.2
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 1.5e-30 137.5 135 50.4
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.5e-30 137.5 95 64.2
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 1.5e-30 137.5 137 49.6
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 2.0e-30 137.1 95 63.2
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 2.0e-30 137.1 95 64.2
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 2.0e-30 137.1 95 64.2
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 2.6e-30 136.7 98 61.2
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 3.4e-30 136.3 148 47.3
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 4.5e-30 136.0 136 49.3
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 5.9e-30 135.6 126 51.6
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 5.9e-30 135.6 137 51.8
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 5.9e-30 135.6 95 62.1
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 5.9e-30 135.6 98 61.2
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 5.9e-30 135.6 95 64.2
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 5.9e-30 135.6 136 48.5
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 7.7e-30 135.2 163 45.4
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 7.7e-30 135.2 91 63.7
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 7.7e-30 135.2 91 65.9
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 1.0e-29 134.8 95 63.2
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 1.0e-29 134.8 136 47.8
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 1.3e-29 134.4 95 63.2
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 1.7e-29 134.0 148 48.0
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 1.7e-29 134.0 157 42.0
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 2.2e-29 133.7 107 57.9
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 2.9e-29 133.3 99 62.6
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 2.9e-29 133.3 99 62.6
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 2.9e-29 133.3 99 62.6
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 2.9e-29 133.3 107 57.0
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 2.9e-29 133.3 95 62.1
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 3.8e-29 132.9 91 62.6
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 3.8e-29 132.9 95 61.1
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 3.8e-29 132.9 166 43.4
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 5.0e-29 132.5 162 43.2
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 5.0e-29 132.5 98 61.2
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 5.0e-29 132.5 95 62.1
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 6.5e-29 132.1 176 40.3
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 6.5e-29 132.1 97 60.8
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 6.5e-29 132.1 183 41.0
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 6.5e-29 132.1 95 60.0
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 6.5e-29 132.1 138 47.1
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 8.5e-29 131.7 117 53.8
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 8.5e-29 131.7 91 61.5
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 8.5e-29 131.7 91 61.5
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 8.5e-29 131.7 95 61.1
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 1.9e-28 130.6 100 58.0
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 1.9e-28 130.6 135 47.4
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.9e-28 130.6 151 45.0
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 3.2e-28 129.8 91 61.5
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 4.2e-28 129.4 98 60.2
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 5.5e-28 129.0 96 57.3
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 9.4e-28 128.3 87 63.2
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 9.4e-28 128.3 95 57.9
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 9.4e-28 128.3 98 56.1
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 1.2e-27 127.9 160 43.1
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 1.2e-27 127.9 91 60.4
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 1.2e-27 127.9 95 58.9
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 1.6e-27 127.5 91 60.4
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 1.6e-27 127.5 91 59.3
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 2.1e-27 127.1 95 57.9
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.7e-27 126.7 95 57.9
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 2.7e-27 126.7 91 59.3
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 3.6e-27 126.3 90 60.0
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 4.6e-27 125.9 95 60.0
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 4.6e-27 125.9 135 44.4
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 4.6e-27 125.9 92 60.9
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 1.0e-26 124.8 131 46.6
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 1.0e-26 124.8 116 52.6
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 1.4e-26 124.4 91 59.3
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 1.8e-26 124.0 95 58.9
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 1.8e-26 124.0 87 62.1
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 1.8e-26 124.0 91 58.2
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 2.3e-26 123.6 91 59.3
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 3.0e-26 123.2 90 60.0
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 3.0e-26 123.2 133 47.4
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 3.0e-26 123.2 101 54.5
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 3.0e-26 123.2 186 37.6
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 3.9e-26 122.9 91 60.4
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 5.1e-26 122.5 98 55.1
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 5.1e-26 122.5 93 58.1
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 6.7e-26 122.1 122 47.5
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 6.7e-26 122.1 90 58.9
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 8.8e-26 121.7 120 49.2
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 8.8e-26 121.7 132 44.7
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 1.1e-25 121.3 90 57.8
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 1.1e-25 121.3 90 57.8
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 1.1e-25 121.3 90 57.8
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 1.5e-25 120.9 140 46.4
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 1.5e-25 120.9 135 45.2
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 3.3e-25 119.8 122 46.7
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 4.3e-25 119.4 131 46.6
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 7.4e-25 118.6 140 45.7
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 7.4e-25 118.6 133 45.9
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 1.3e-24 117.9 137 44.5
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 1.3e-24 117.9 137 44.5
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 1.7e-24 117.5 75 69.3
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 2.8e-24 116.7 131 45.0
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 2.8e-24 116.7 80 62.5
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 2.8e-24 116.7 144 45.8
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 4.8e-24 115.9 76 63.2
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 8.2e-24 115.2 91 53.8
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.2e-24 115.2 91 53.8
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.2e-24 115.2 91 53.8
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 1.1e-23 114.8 134 46.3
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.8e-23 114.0 91 53.8
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.4e-23 113.6 91 52.7
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 2.4e-23 113.6 92 55.4
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 3.1e-23 113.2 91 51.6
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 5.3e-23 112.5 91 52.7
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 2.6e-22 110.2 146 41.1
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 5.9e-22 109.0 98 51.0
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 2.2e-21 107.1 94 51.1
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 2.5e-20 103.6 77 57.1
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 1.8e-18 97.4 71 57.7
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 2.2e-16 90.5 86 45.3
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 3.5e-14 83.2 79 43.0
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 2.2e-13 80.5 106 38.7
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.5e-12 77.8 93 38.7
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 3.2e-12 76.6 59 52.5
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 9.4e-12 75.1 93 36.6
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 1.2e-11 74.7 90 36.7
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 1.4e-10 71.2 96 40.6
PRCOL_00001193 Prasinoderma coloniale HOM05D001599 ORTHO05D003184 1.8e-10 70.9 60 50.0
Cfa025074 Carpinus fangiana HOM05D005893 ORTHO05D007295 2.3e-10 70.5 68 45.6
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 4.0e-10 69.7 59 54.2
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.7e-08 64.3 80 40.0
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.4e-07 61.2 53 50.9
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.5e-06 56.6 93 32.3
MBI05_g31458_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.5e-06 56.6 72 40.3
unitig_27.g25229 Utricularia gibba HOM05D002826 ORTHO05D003105 7.7e-06 55.5 66 34.8


User provided reference genes

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