Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 0.0e+00 1971.1 1196 100.0
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 3.2e-40 171.8 388 36.1
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 4.2e-40 171.4 428 32.9
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 9.3e-40 170.2 417 33.3
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.6e-39 169.5 382 34.3
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 1.0e-38 166.8 424 33.7
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.3e-38 166.4 384 34.6
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 1.8e-38 166.0 387 37.2
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.8e-38 166.0 385 33.5
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 1.8e-38 166.0 385 34.3
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 2.3e-38 165.6 385 32.7
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 3.0e-38 165.2 391 38.6
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 3.9e-38 164.9 433 32.8
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 1.9e-37 162.5 546 30.4
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 7.4e-37 160.6 390 35.4
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 7.4e-37 160.6 390 35.9
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 1.3e-36 159.8 387 33.9
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 6.3e-36 157.5 386 35.2
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 6.3e-36 157.5 631 29.3
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 8.2e-36 157.1 385 33.2
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 1.1e-35 156.8 639 30.4
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 1.4e-35 156.4 562 32.6
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 1.4e-35 156.4 407 33.2
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 2.4e-35 155.6 384 32.0
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 4.1e-35 154.8 436 32.1
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 9.0e-35 153.7 625 29.9
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 2.0e-34 152.5 518 30.7
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 4.5e-34 151.4 615 28.3
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 4.5e-34 151.4 382 33.2
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 4.5e-34 151.4 560 30.7
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 5.9e-34 151.0 583 30.0
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 7.7e-34 150.6 577 29.6
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 6.5e-33 147.5 626 33.4
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 8.5e-33 147.1 388 32.0
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 8.5e-33 147.1 403 36.7
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 1.1e-32 146.7 632 32.8
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.9e-32 146.0 367 34.3
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 3.2e-32 145.2 556 29.3
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 3.2e-32 145.2 386 33.7
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 5.5e-32 144.4 542 30.1
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 7.2e-32 144.1 423 31.4
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 7.2e-32 144.1 638 34.0
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.1e-31 142.5 386 36.0
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.7e-31 142.1 366 33.1
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 4.6e-31 141.4 551 32.8
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 6.1e-31 141.0 646 28.9
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 7.9e-31 140.6 420 29.8
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 3.0e-30 138.7 633 28.3
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 3.9e-30 138.3 671 26.8
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 6.7e-30 137.5 548 31.0
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 6.7e-30 137.5 375 32.8
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 6.7e-30 137.5 482 32.4
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 1.1e-29 136.7 568 29.4
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 1.5e-29 136.3 677 27.5
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 2.0e-29 136.0 387 30.7
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.6e-29 135.6 548 31.6
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 4.4e-29 134.8 385 31.7
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 7.4e-29 134.0 586 28.7
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 9.7e-29 133.7 663 27.1
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 2.2e-28 132.5 421 29.7
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 8.2e-28 130.6 480 29.4
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 1.1e-27 130.2 466 28.3
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 1.8e-27 129.4 609 29.2
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 6.9e-27 127.5 548 28.3
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.2e-26 126.7 626 30.2
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 1.5e-26 126.3 627 28.7
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.5e-26 126.3 466 33.5
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 1.5e-26 126.3 558 30.3
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 4.5e-26 124.8 425 29.6
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 5.9e-26 124.4 390 46.7
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 5.9e-26 124.4 389 33.9
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 7.7e-26 124.0 463 30.0
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 2.9e-25 122.1 464 30.4
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 3.8e-25 121.7 388 33.8
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 1.4e-24 119.8 407 30.5
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 1.4e-24 119.8 526 30.6
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 1.9e-24 119.4 384 32.3
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 3.2e-24 118.6 538 32.2
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 3.2e-24 118.6 543 36.5
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 9.4e-24 117.1 266 38.0
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.2e-23 116.7 583 27.4
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 1.6e-23 116.3 522 27.6
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 1.6e-23 116.3 522 30.3
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.6e-23 116.3 464 30.8
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 4.7e-23 114.8 525 30.3
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 6.1e-23 114.4 553 28.6
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 6.1e-23 114.4 554 29.4
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 1.0e-22 113.6 266 35.3
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 1.0e-22 113.6 387 28.7
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 2.3e-22 112.5 536 30.2
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 3.9e-22 111.7 532 29.7
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 1.5e-21 109.8 539 26.0
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 2.0e-21 109.4 544 28.3
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 2.6e-21 109.0 541 31.2
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 3.3e-21 108.6 563 29.5
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 5.7e-21 107.8 761 26.3
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 5.7e-21 107.8 447 35.1
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 5.7e-21 107.8 450 26.9
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 7.4e-21 107.5 517 28.6
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 9.7e-21 107.1 543 28.7
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 2.2e-20 105.9 643 26.9
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 6.3e-20 104.4 519 30.8
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 1.4e-19 103.2 556 27.3
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 7.0e-19 100.9 411 28.5
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 9.1e-19 100.5 657 28.6
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 9.1e-19 100.5 243 36.2
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 1.6e-18 99.8 387 26.6
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 2.0e-18 99.4 603 24.7
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 2.6e-18 99.0 387 27.6
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 2.6e-18 99.0 534 28.1
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 1.3e-17 96.7 445 26.3
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 2.2e-17 95.9 429 32.2
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 2.9e-17 95.5 388 28.9
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 5.0e-17 94.7 388 28.4
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 8.5e-17 94.0 426 26.3
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 1.1e-16 93.6 526 27.9
CDE04G0520 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 2.5e-16 92.4 69 66.7
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 2.5e-16 92.4 651 25.7
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 1.2e-15 90.1 603 24.5
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 2.1e-15 89.4 562 29.7
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 2.1e-15 89.4 231 34.6
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 8.0e-15 87.4 544 27.2
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 1.4e-14 86.7 529 26.8
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 4.0e-14 85.1 567 24.2
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 5.2e-14 84.7 385 27.0
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 5.2e-14 84.7 664 25.6
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 1.2e-13 83.6 397 26.4
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 2.0e-13 82.8 594 24.7
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 4.4e-13 81.6 624 25.5
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 5.7e-13 81.3 120 42.5
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 9.7e-13 80.5 565 25.0
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 1.3e-12 80.1 452 25.4
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 1.7e-12 79.7 480 28.1
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 4.8e-12 78.2 60 58.3
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 6.3e-12 77.8 595 25.0
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 6.3e-12 77.8 568 25.5
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 1.4e-11 76.6 654 27.1
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 5.3e-11 74.7 111 40.5
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 7.0e-11 74.3 618 23.6
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 7.0e-11 74.3 388 27.8
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 9.1e-11 73.9 650 25.7
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 1.6e-10 73.2 544 30.5
Hma1.2p1_0112F.1_g055050 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.5e-10 72.0 51 64.7
Gohir.D09G057732 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.0e-09 70.5 60 55.0
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 2.2e-09 69.3 148 31.8
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 2.9e-09 68.9 748 24.6
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 2.9e-09 68.9 548 28.1
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 5.0e-09 68.2 103 39.8
Gohir.D04G116566 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.5e-08 64.7 55 50.9
MD13G1227500 Malus domestica HOM05D003628 ORTHO05D004253 4.7e-07 61.6 52 51.9
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 6.1e-07 61.2 265 27.5
AL2G14740 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 5.2e-06 58.2 70 44.3
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 5.2e-06 58.2 75 42.7
Actinidia11385 Actinidia chinensis HOM05D003628 ORTHO05D004253 6.8e-06 57.8 83 48.2


User provided reference genes

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