Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 0.0e+00 1425.2 773 100.0
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.2e-168 597.8 620 50.2
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 2.7e-157 560.1 596 50.2
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 2.8e-154 550.1 613 48.3
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.5e-152 544.3 669 45.4
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 3.1e-145 520.0 617 43.9
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 5.3e-145 519.2 553 49.2
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 5.9e-144 515.8 659 43.9
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.3e-143 514.6 656 44.4
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.7e-143 514.2 621 44.3
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 2.2e-143 513.8 652 44.8
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 2.2e-143 513.8 647 42.3
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 2.9e-143 513.5 617 45.1
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 2.9e-143 513.5 651 43.8
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 7.2e-142 508.8 658 41.6
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 7.2e-142 508.8 648 44.4
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 9.4e-142 508.4 674 43.0
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 1.2e-141 508.1 614 44.8
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 1.2e-141 508.1 661 43.9
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 2.7e-141 506.9 643 43.2
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 3.6e-141 506.5 662 43.4
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 4.6e-141 506.1 612 44.9
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 4.6e-141 506.1 649 43.6
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 6.1e-141 505.8 659 40.8
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 7.9e-141 505.4 662 43.5
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.0e-140 505.0 659 42.9
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.4e-140 504.6 647 45.0
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 1.8e-140 504.2 640 43.6
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.8e-140 504.2 672 42.6
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 5.1e-140 502.7 613 44.4
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 8.8e-140 501.9 656 43.4
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 8.8e-140 501.9 658 42.6
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 2.0e-139 500.7 641 43.1
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 7.4e-139 498.8 648 41.2
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.2e-138 497.3 656 42.5
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 2.8e-138 496.9 615 44.2
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 8.2e-138 495.4 659 42.8
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 8.2e-138 495.4 698 41.4
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 1.8e-137 494.2 671 41.6
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 3.1e-137 493.4 651 42.5
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 5.3e-137 492.7 651 41.2
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 6.9e-137 492.3 658 41.6
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 1.2e-136 491.5 660 41.8
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 1.2e-136 491.5 654 41.9
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 2.0e-136 490.7 640 42.5
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 2.6e-136 490.3 648 44.0
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 4.5e-136 489.6 619 43.6
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 7.7e-136 488.8 658 41.9
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 7.7e-136 488.8 639 42.9
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.3e-135 488.0 659 40.8
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.9e-135 486.9 631 44.2
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 6.5e-135 485.7 680 41.2
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 8.5e-135 485.3 656 42.4
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 8.5e-135 485.3 646 42.7
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 9.4e-134 481.9 660 41.5
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 9.4e-134 481.9 615 42.3
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 9.4e-134 481.9 641 41.8
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.6e-133 481.1 662 41.8
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 3.6e-133 479.9 618 41.3
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 1.4e-132 478.0 659 41.0
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 3.0e-132 476.9 660 41.4
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 3.9e-132 476.5 617 43.1
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 6.7e-132 475.7 614 42.8
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 8.2e-130 468.8 619 42.8
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 1.1e-129 468.4 658 40.9
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 1.4e-129 468.0 658 41.5
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 4.1e-129 466.5 654 41.3
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 4.1e-129 466.5 661 40.5
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 5.9e-128 462.6 655 40.3
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 1.4e-124 451.4 620 40.3
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 1.4e-124 451.4 661 41.5
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.8e-124 451.1 530 44.9
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 5.2e-124 449.5 637 38.8
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.5e-123 448.0 637 39.2
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 4.1e-121 439.9 688 38.2
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 7.0e-121 439.1 656 38.6
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 5.9e-120 436.0 666 37.4
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.0e-119 435.3 488 45.1
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 8.5e-119 432.2 656 38.3
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 6.1e-117 426.0 577 42.8
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 3.4e-115 420.2 780 34.4
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 9.7e-115 418.7 601 41.1
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.1e-113 413.3 288 64.2
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.0e-112 411.0 643 37.9
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 5.0e-111 406.4 643 36.7
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.2e-110 403.7 622 38.3
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 8.0e-109 399.1 409 48.9
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 2.4e-105 387.5 659 36.3
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 3.5e-104 383.6 481 42.2
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.9e-104 382.9 412 47.6
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 2.8e-101 374.0 554 39.0
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 8.0e-101 372.5 394 47.5
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 3.4e-99 367.1 664 35.4
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 4.4e-99 366.7 473 43.3
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 1.6e-96 358.2 553 40.1
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 2.1e-93 347.8 671 33.7
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.7e-93 346.7 681 34.8
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.8e-92 344.7 660 33.5
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 6.8e-92 342.8 530 38.5
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 7.5e-91 339.3 590 35.6
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 2.5e-86 324.3 428 43.0
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 1.2e-85 322.0 687 32.6
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 2.8e-85 320.9 305 50.8
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 6.2e-85 319.7 336 47.9
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 6.4e-74 283.1 524 35.3
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.7e-72 277.7 370 40.8
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 1.1e-68 265.8 500 34.2
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 3.8e-66 257.3 617 31.4
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 5.4e-65 253.4 389 39.1
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 3.5e-64 250.8 386 38.9
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.8e-58 230.7 147 70.7
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.9e-58 230.3 577 31.9
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.1e-57 229.2 355 38.9
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.6e-54 216.9 434 34.1
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 7.3e-54 216.5 215 49.3
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 1.4e-52 212.2 155 62.6
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 7.4e-46 189.9 560 28.2
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.3e-45 189.1 135 63.7
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.8e-44 185.3 151 53.6
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 4.0e-44 184.1 147 55.8
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 4.2e-41 174.1 283 35.3
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.3e-39 169.1 288 36.8
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 3.2e-33 147.9 346 32.9
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 7.1e-33 146.7 345 33.6
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 8.7e-31 139.8 433 29.1
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 8.2e-29 133.3 204 41.7
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 4.5e-27 127.5 233 36.9
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 1.4e-25 122.5 290 32.1
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 1.4e-25 122.5 118 49.2
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.9e-25 122.1 81 65.4
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 1.6e-24 119.0 370 27.8
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.6e-24 119.0 84 64.3
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.6e-24 117.5 92 57.6
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 4.1e-20 104.4 83 53.0
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 5.3e-20 104.0 310 29.7
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 6.5e-18 97.1 132 37.1
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 3.2e-17 94.7 105 45.7
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 2.7e-16 91.7 70 58.6
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 1.8e-15 89.0 222 34.7
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 9.7e-14 83.2 70 55.7
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.3e-13 82.8 215 28.4
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 1.8e-12 79.0 129 39.5
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.8e-12 79.0 196 33.7
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 2.0e-11 75.5 173 33.5
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.6e-08 65.9 131 34.4


User provided reference genes

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