Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g37896 Chara braunii HOM05D012618 ORTHO05D000497 2.2e-232 808.5 394 100.0
CBR_g74645 Chara braunii HOM05D012618 ORTHO05D000497 1.1e-90 337.8 198 78.3
CBR_g56778 Chara braunii HOM05D012618 ORTHO05D000497 1.0e-83 314.7 198 70.7
CBR_g83438 Chara braunii HOM05D012618 ORTHO05D000497 3.2e-61 240.0 216 51.4
CBR_g50474 Chara braunii HOM05D001161 ORTHO05D000497 1.2e-60 238.0 197 55.3
CBR_g38928 Chara braunii HOM05D012618 ORTHO05D000497 7.3e-58 228.8 206 50.0
CBR_g41635 Chara braunii HOM05D012618 ORTHO05D000497 5.8e-55 219.2 214 47.2
CBR_g22880 Chara braunii HOM05D012618 ORTHO05D000497 1.3e-51 208.0 195 47.7
CBR_g51377 Chara braunii HOM05D012618 ORTHO05D000497 4.7e-49 199.5 207 43.5
CBR_g4336 Chara braunii HOM05D012618 ORTHO05D000497 1.1e-45 188.3 150 55.3
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 1.9e-45 187.6 197 45.2
CBR_g38868 Chara braunii HOM05D012618 ORTHO05D000497 1.6e-44 184.5 176 47.7
CBR_g23713 Chara braunii HOM05D012618 ORTHO05D000497 3.0e-27 127.1 94 56.4
CDE09G1277 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 2.7e-20 104.0 125 44.8
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 6.0e-20 102.8 125 47.2
CBR_g19003 Chara braunii HOM05D012618 ORTHO05D000497 8.7e-19 99.0 98 46.9
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 1.1e-16 92.0 125 48.0
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 3.1e-16 90.5 131 42.7
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 4.0e-16 90.1 126 42.9
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 5.8e-15 86.3 125 43.2
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 1.3e-14 85.1 125 39.2
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 1.7e-14 84.7 134 38.8
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 2.2e-14 84.3 125 43.2
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 2.9e-14 84.0 125 40.0
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 3.8e-14 83.6 126 42.9
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 6.5e-14 82.8 126 41.3
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 6.5e-14 82.8 126 41.3
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 6.5e-14 82.8 126 41.3
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 6.5e-14 82.8 126 41.3
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 6.5e-14 82.8 125 39.2
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 8.4e-14 82.4 126 41.3
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 8.4e-14 82.4 125 39.2
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 1.1e-13 82.0 125 42.4
SMO196G0062 Selaginella moellendorffii HOM05D005412 ORTHO05D006096 1.1e-13 82.0 128 39.1
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 1.4e-13 81.6 126 40.5
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 4.2e-13 80.1 127 41.7
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 4.2e-13 80.1 126 40.5
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 4.2e-13 80.1 133 38.3
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 5.5e-13 79.7 125 40.8
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 5.5e-13 79.7 125 36.8
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 5.5e-13 79.7 125 40.8
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 7.1e-13 79.3 126 39.7
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 7.1e-13 79.3 126 38.9
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 7.1e-13 79.3 126 39.7
Atru.chr5.2729 Acer truncatum HOM05D005412 ORTHO05D006096 9.3e-13 79.0 136 39.7
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 9.3e-13 79.0 128 42.2
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 9.3e-13 79.0 125 40.0
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 9.3e-13 79.0 125 40.8
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 9.3e-13 79.0 125 40.0
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 1.2e-12 78.6 126 38.9
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 1.2e-12 78.6 128 42.2
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 1.2e-12 78.6 125 42.4
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 1.2e-12 78.6 128 42.2
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 1.6e-12 78.2 125 37.6
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 1.6e-12 78.2 132 37.9
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 1.6e-12 78.2 128 42.2
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 2.1e-12 77.8 125 36.8
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 2.1e-12 77.8 129 38.8
Oeu025573.1 Olea europaea HOM05D005412 ORTHO05D006096 2.1e-12 77.8 124 40.3
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 2.7e-12 77.4 125 40.0
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 2.7e-12 77.4 125 44.8
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 3.5e-12 77.0 128 45.3
Actinidia00446 Actinidia chinensis HOM05D005412 ORTHO05D006096 4.6e-12 76.6 125 40.0
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 4.6e-12 76.6 130 37.7
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 4.6e-12 76.6 127 38.6
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 4.6e-12 76.6 125 38.4
CsaV3_3G018540 Cucumis sativus L. HOM05D005412 ORTHO05D006096 6.0e-12 76.3 125 38.4
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 6.0e-12 76.3 125 41.6
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 7.9e-12 75.9 125 38.4
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 7.9e-12 75.9 132 37.1
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 7.9e-12 75.9 125 41.6
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 1.0e-11 75.5 125 40.8
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 1.3e-11 75.1 131 35.9
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 2.3e-11 74.3 125 40.0
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 2.3e-11 74.3 126 41.3
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 2.3e-11 74.3 128 39.1
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 2.3e-11 74.3 126 38.1
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 3.0e-11 73.9 125 37.6
Os06g0267600 Oryza sativa ssp. japonica HOM05D005412 ORTHO05D006096 3.0e-11 73.9 125 33.6
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 3.9e-11 73.6 154 33.8
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 3.9e-11 73.6 125 40.0
Zm00001eb380180 Zea mays HOM05D005412 ORTHO05D006096 3.9e-11 73.6 131 34.4
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 5.1e-11 73.2 135 37.8
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 6.7e-11 72.8 125 39.2
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 8.7e-11 72.4 125 41.6
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 1.1e-10 72.0 125 36.8
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 1.1e-10 72.0 125 38.4
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 1.1e-10 72.0 125 37.6
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 1.9e-10 71.2 124 39.5
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 2.5e-10 70.9 125 34.4
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 3.3e-10 70.5 125 36.8
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 4.3e-10 70.1 125 37.6
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 5.7e-10 69.7 134 38.1
HPP92_028321 Vanilla planifolia HOM05D005412 ORTHO05D006096 7.4e-10 69.3 57 47.4
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 9.7e-10 68.9 128 35.9
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 1.6e-09 68.2 133 38.3
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 2.2e-09 67.8 152 32.9
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 2.2e-09 67.8 139 36.0
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 2.8e-09 67.4 125 39.2
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 3.7e-09 67.0 138 37.7
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 4.8e-09 66.6 125 36.0
Gohir.A03G189900 Gossypium hirsutum HOM05D005412 ORTHO05D006096 1.8e-08 64.7 125 36.8
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 1.8e-08 64.7 125 36.8
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 4.1e-08 63.5 152 34.2
Gohir.D02G210500 Gossypium hirsutum HOM05D005412 ORTHO05D006096 4.1e-08 63.5 125 36.0
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 4.1e-08 63.5 125 36.0
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 5.3e-08 63.2 124 37.1
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 5.3e-08 63.2 148 36.5
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 5.3e-08 63.2 161 31.7
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 6.9e-08 62.8 125 36.0
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 1.2e-07 62.0 127 35.4
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 3.4e-07 60.5 125 33.6
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 7.7e-07 59.3 152 33.6
FvH4_2g06211 Fragaria vesca HOM05D005412 ORTHO05D006096 1.7e-06 58.2 40 62.5
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 1.7e-06 58.2 159 34.0
TPR.G30995 Trifolium pratense HOM05D005412 ORTHO05D006096 1.7e-06 58.2 37 67.6
AUR62016617 Chenopodium quinoa HOM05D005412 ORTHO05D006096 2.2e-06 57.8 37 64.9
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 2.9e-06 57.4 37 67.6
CBR_g40048 Chara braunii HOM05D010447 ORTHO05D136820 3.8e-06 57.0 49 51.0
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 6.5e-06 56.2 143 31.5
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 8.5e-06 55.8 125 31.2


User provided reference genes

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