Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 7.3e-95 350.5 173 100.0
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 6.3e-30 134.8 143 48.3
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 3.1e-29 132.5 144 49.3
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 2.6e-28 129.4 151 45.0
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 2.2e-27 126.3 153 45.1
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 2.9e-27 125.9 142 46.5
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 3.8e-27 125.6 142 45.8
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 5.0e-27 125.2 142 45.1
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 5.0e-27 125.2 142 46.5
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 6.5e-27 124.8 146 44.5
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 8.5e-27 124.4 144 45.8
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 8.5e-27 124.4 144 43.1
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 8.5e-27 124.4 149 43.0
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 1.1e-26 124.0 142 45.8
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.1e-26 124.0 142 45.8
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 1.5e-26 123.6 142 44.4
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 1.5e-26 123.6 147 42.9
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.9e-26 123.2 142 45.1
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 1.9e-26 123.2 150 44.0
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 2.5e-26 122.9 158 39.9
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 3.2e-26 122.5 151 41.7
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 3.2e-26 122.5 144 43.1
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 3.2e-26 122.5 140 45.7
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 3.2e-26 122.5 150 42.7
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 3.2e-26 122.5 150 44.0
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 4.2e-26 122.1 154 42.2
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 4.2e-26 122.1 142 44.4
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 5.5e-26 121.7 142 43.7
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 5.5e-26 121.7 132 48.5
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 5.5e-26 121.7 142 45.1
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 7.2e-26 121.3 155 41.3
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 7.2e-26 121.3 142 43.7
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 9.4e-26 120.9 148 42.6
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 9.4e-26 120.9 154 41.6
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 1.2e-25 120.6 142 41.5
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 1.6e-25 120.2 142 43.0
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 2.1e-25 119.8 150 42.0
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 2.1e-25 119.8 150 42.0
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 2.7e-25 119.4 142 44.4
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 2.7e-25 119.4 141 46.8
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 3.6e-25 119.0 151 41.1
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 4.7e-25 118.6 146 42.5
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 4.7e-25 118.6 142 44.4
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 4.7e-25 118.6 144 42.4
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 4.7e-25 118.6 142 41.5
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 6.1e-25 118.2 142 43.7
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 6.1e-25 118.2 142 43.7
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 6.1e-25 118.2 142 39.4
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 6.1e-25 118.2 142 42.3
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 8.0e-25 117.9 148 40.5
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 8.0e-25 117.9 148 41.9
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 8.0e-25 117.9 142 43.7
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 1.0e-24 117.5 142 42.3
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.0e-24 117.5 145 42.1
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 1.4e-24 117.1 148 39.9
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 1.4e-24 117.1 142 43.0
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 1.4e-24 117.1 142 41.5
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 1.8e-24 116.7 153 38.6
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 1.8e-24 116.7 165 39.4
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 1.8e-24 116.7 156 40.4
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 2.3e-24 116.3 147 40.8
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 2.3e-24 116.3 146 43.2
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 3.0e-24 115.9 146 41.1
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 3.0e-24 115.9 146 39.0
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 3.0e-24 115.9 142 38.0
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 4.0e-24 115.5 148 39.9
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 4.0e-24 115.5 147 40.8
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 5.2e-24 115.2 148 41.2
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 5.2e-24 115.2 142 43.0
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 6.7e-24 114.8 142 40.8
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 6.7e-24 114.8 142 43.7
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 6.7e-24 114.8 153 40.5
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 6.7e-24 114.8 152 38.2
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 8.8e-24 114.4 142 41.5
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 8.8e-24 114.4 142 43.0
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 8.8e-24 114.4 144 42.4
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 1.1e-23 114.0 153 41.8
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.1e-23 114.0 147 40.1
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 1.1e-23 114.0 147 40.8
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 1.5e-23 113.6 142 43.0
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 2.0e-23 113.2 142 38.7
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 2.6e-23 112.8 145 42.1
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 3.3e-23 112.5 141 43.3
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 3.3e-23 112.5 142 40.8
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 4.4e-23 112.1 153 39.2
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 4.4e-23 112.1 142 40.1
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 5.7e-23 111.7 147 38.8
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 5.7e-23 111.7 142 40.1
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 5.7e-23 111.7 148 40.5
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 7.5e-23 111.3 159 39.0
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 9.7e-23 110.9 142 40.8
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 9.7e-23 110.9 142 40.8
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 1.3e-22 110.5 142 38.7
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 1.3e-22 110.5 142 38.7
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 1.3e-22 110.5 142 40.8
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 1.7e-22 110.2 139 40.3
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 1.7e-22 110.2 142 38.7
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 1.7e-22 110.2 143 39.9
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 1.7e-22 110.2 142 38.7
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 2.2e-22 109.8 147 38.1
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 2.8e-22 109.4 142 41.5
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 2.8e-22 109.4 159 39.0
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 2.8e-22 109.4 159 39.0
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 2.8e-22 109.4 142 39.4
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.8e-22 109.4 142 38.0
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 6.3e-22 108.2 132 40.9
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 6.3e-22 108.2 154 37.7
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 1.1e-21 107.5 155 37.4
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 1.1e-21 107.5 146 41.8
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.4e-21 106.3 142 40.1
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.4e-21 106.3 142 40.1
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 2.4e-21 106.3 142 36.6
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 3.1e-21 105.9 143 39.2
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 4.1e-21 105.5 138 40.6
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 4.1e-21 105.5 138 42.8
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 7.0e-21 104.8 133 41.4
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 9.1e-21 104.4 142 40.8
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.6e-20 102.8 134 38.8
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 1.0e-19 100.9 143 37.8
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 1.7e-19 100.1 148 37.2
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 3.2e-18 95.9 168 32.1
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 1.2e-17 94.0 150 34.7
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.3e-14 84.0 113 41.6
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 1.1e-13 80.9 80 45.0
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 1.8e-13 80.1 96 44.8
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 1.2e-12 77.4 118 34.7
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 7.7e-12 74.7 80 45.0
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 3.8e-11 72.4 130 39.2
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 6.5e-11 71.6 78 43.6
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 8.8e-08 61.2 63 46.0
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.2e-07 60.8 80 32.5


User provided reference genes

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