Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 8.5e-304 1046.2 526 100.0
CBR_g39892 Chara braunii HOM05D009436 ORTHO05D008503 1.4e-75 288.1 318 54.7
CBR_g38643 Chara braunii HOM05D009436 ORTHO05D008503 5.7e-66 256.1 318 50.3
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 1.3e-65 255.0 317 50.5
CBR_g11962 Chara braunii HOM05D009436 ORTHO05D000048 3.8e-62 243.4 317 49.2
CBR_g41301 Chara braunii HOM05D009436 ORTHO05D008503 9.1e-56 222.2 132 87.9
CBR_g22265 Chara braunii HOM05D009436 ORTHO05D008503 8.5e-54 215.7 281 50.2
CBR_g9099 Chara braunii HOM05D009436 ORTHO05D008503 4.2e-53 213.4 285 49.5
CBR_g15956 Chara braunii HOM05D009436 ORTHO05D008503 1.6e-52 211.5 281 49.1
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 2.3e-51 207.6 234 48.7
CBR_g53741 Chara braunii HOM05D009436 ORTHO05D008503 3.0e-51 207.2 281 48.8
CBR_g34153 Chara braunii HOM05D009436 ORTHO05D008503 4.0e-51 206.8 281 49.1
CBR_g53727 Chara braunii HOM05D009436 ORTHO05D008503 6.8e-51 206.1 281 49.1
CBR_g11999 Chara braunii HOM05D009436 ORTHO05D008503 1.7e-49 201.4 284 48.2
CBR_g50800 Chara braunii HOM05D009436 ORTHO05D008503 3.7e-49 200.3 283 48.8
CBR_g904 Chara braunii HOM05D009436 ORTHO05D008503 4.8e-49 199.9 281 48.8
CBR_g48773 Chara braunii HOM05D009436 ORTHO05D008503 6.3e-49 199.5 283 48.4
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 2.7e-47 194.1 204 49.0
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 2.2e-46 191.0 181 51.9
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 5.0e-46 189.9 192 50.0
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 8.5e-46 189.1 148 57.4
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 1.9e-45 188.0 182 50.0
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 5.5e-45 186.4 193 48.7
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 5.5e-45 186.4 167 52.1
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 7.2e-45 186.0 163 52.1
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 7.2e-45 186.0 231 42.9
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 9.5e-45 185.7 195 46.7
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 9.5e-45 185.7 149 55.7
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 1.2e-44 185.3 142 57.0
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 2.1e-44 184.5 181 49.7
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 2.1e-44 184.5 181 51.4
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 3.6e-44 183.7 197 48.7
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 4.7e-44 183.3 148 54.1
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 6.1e-44 183.0 184 49.5
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 8.0e-44 182.6 147 54.4
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 8.0e-44 182.6 181 50.3
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.0e-43 182.2 183 48.1
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.0e-43 182.2 184 46.2
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 1.8e-43 181.4 147 53.7
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.8e-43 181.4 168 51.8
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.8e-43 181.4 261 39.5
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 2.3e-43 181.0 182 48.9
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 2.3e-43 181.0 168 51.2
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 2.3e-43 181.0 182 48.4
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 3.0e-43 180.6 152 55.3
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 3.0e-43 180.6 166 50.6
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 4.0e-43 180.3 182 47.8
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 4.0e-43 180.3 182 48.4
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 5.2e-43 179.9 171 49.7
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 5.2e-43 179.9 181 48.1
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 5.2e-43 179.9 186 46.8
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 8.8e-43 179.1 202 45.0
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 8.8e-43 179.1 150 54.7
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 1.5e-42 178.3 218 43.1
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 1.5e-42 178.3 155 52.9
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 2.0e-42 177.9 200 45.5
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 2.6e-42 177.6 186 49.5
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 2.6e-42 177.6 187 48.7
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 3.4e-42 177.2 130 58.5
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 3.4e-42 177.2 149 52.3
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 3.4e-42 177.2 145 57.2
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 3.4e-42 177.2 185 50.3
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 4.4e-42 176.8 187 49.2
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 4.4e-42 176.8 147 52.4
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 5.7e-42 176.4 148 53.4
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 7.5e-42 176.0 134 56.0
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 7.5e-42 176.0 184 46.7
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 9.8e-42 175.6 187 48.1
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 9.8e-42 175.6 147 55.1
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.7e-41 174.9 182 48.9
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.7e-41 174.9 135 56.3
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 3.7e-41 173.7 187 48.1
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 3.7e-41 173.7 187 48.1
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 3.7e-41 173.7 181 47.5
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 4.9e-41 173.3 202 45.5
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 6.3e-41 172.9 196 44.4
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 6.3e-41 172.9 187 46.0
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 8.3e-41 172.6 193 47.2
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.1e-40 172.2 148 51.4
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.4e-40 171.8 181 48.6
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.4e-40 171.8 147 51.7
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 1.8e-40 171.4 130 56.9
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.8e-40 171.4 193 45.6
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 2.4e-40 171.0 132 55.3
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 2.4e-40 171.0 148 51.4
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 2.4e-40 171.0 136 56.6
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 3.1e-40 170.6 181 48.1
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 5.4e-40 169.9 183 44.8
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 9.2e-40 169.1 133 57.1
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 9.2e-40 169.1 133 57.1
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 9.2e-40 169.1 200 44.5
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.2e-39 168.7 231 41.1
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.2e-39 168.7 185 44.9
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 1.2e-39 168.7 182 46.2
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.6e-39 168.3 156 51.9
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 2.0e-39 167.9 148 50.7
CBR_g253 Chara braunii HOM05D009436 ORTHO05D008503 3.5e-39 167.2 266 45.1
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 7.7e-39 166.0 138 52.2
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 4.7e-36 156.8 174 44.3
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 1.0e-35 155.6 182 45.6
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 1.6e-31 141.7 182 44.0
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 5.9e-31 139.8 139 51.8
CBR_g57030 Chara braunii HOM05D009436 ORTHO05D008503 1.9e-29 134.8 286 38.5
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 9.5e-29 132.5 101 56.4
CBR_g8497 Chara braunii HOM05D000019 ORTHO05D006897 1.1e-24 119.0 188 45.2
CBR_g4423 Chara braunii HOM05D009436 ORTHO05D008503 1.6e-23 115.2 79 75.9
CBR_g31049 Chara braunii HOM05D009436 ORTHO05D008503 6.0e-23 113.2 63 85.7
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.3e-21 107.1 98 50.0
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 5.6e-21 106.7 86 54.7
CBR_g39479 Chara braunii HOM05D009436 ORTHO05D008503 7.3e-21 106.3 146 47.9
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 3.1e-19 100.9 127 40.9
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 8.9e-19 99.4 127 40.9
CBR_g48228 Chara braunii HOM05D009436 ORTHO05D137023 2.9e-17 94.4 166 41.0
CBR_g54949 Chara braunii HOM05D009436 ORTHO05D008503 3.7e-17 94.0 166 38.6
CBR_g41414 Chara braunii HOM05D009436 ORTHO05D137052 2.4e-16 91.3 169 36.7
CBR_g563 Chara braunii HOM05D009436 ORTHO05D008503 5.4e-16 90.1 156 41.0
CBR_g31921 Chara braunii HOM05D009436 ORTHO05D135214 6.0e-15 86.7 158 36.1
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 1.0e-14 85.9 130 36.9
CBR_g45719 Chara braunii HOM05D009436 ORTHO05D131058 7.3e-13 79.7 58 65.5
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 1.6e-12 78.6 54 63.0
CBR_g25930 Chara braunii HOM05D009436 ORTHO05D135274 1.1e-11 75.9 63 58.7
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 1.1e-11 75.9 125 38.4
CBR_g22357 Chara braunii HOM05D009436 ORTHO05D131813 3.4e-10 70.9 158 34.2
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 3.4e-10 70.9 48 62.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.4e-08 65.5 127 33.9
CBR_g8072 Chara braunii HOM05D009436 ORTHO05D136825 2.4e-08 64.7 107 42.1
Pp3s30_790 Physcomitrium patens HOM05D002374 ORTHO05D003594 1.7e-06 58.5 57 49.1


User provided reference genes

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