Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g37553 Chara braunii HOM05D002968 ORTHO05D003328 5.7e-55 217.6 134 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1615 Anthoceros agrestis HOM05D002968 ORTHO05D003328 6.8e-16 87.8 127 55.1
Pp3c5_17290 Physcomitrium patens HOM05D002968 ORTHO05D003328 2.0e-15 86.3 132 55.3
Pp3c1_32200 Physcomitrium patens HOM05D002968 ORTHO05D003328 2.9e-14 82.4 136 50.0
Pp3c6_15360 Physcomitrium patens HOM05D002968 ORTHO05D003328 1.4e-13 80.1 133 51.9
Pp3c11_23670 Physcomitrium patens HOM05D002968 ORTHO05D003328 5.4e-13 78.2 135 49.6
Mapoly0091s0009 Marchantia polymorpha HOM05D002968 ORTHO05D003328 2.7e-12 75.9 134 46.3
SEGI_05723 Sequoiadendron giganteum HOM05D002968 ORTHO05D003328 1.3e-11 73.6 133 43.6
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 2.5e-10 69.3 99 45.5
ATR0598G170 Amborella trichopoda HOM05D002968 ORTHO05D003328 1.2e-09 67.0 94 47.9
CDE04G2722 Ceratophyllum demersum HOM05D008470 ORTHO05D010644 1.6e-09 66.6 99 44.4
MELO3C004642.2 Cucumis melo HOM05D002968 ORTHO05D003328 3.6e-09 65.5 55 65.5
MELO3C015509.2 Cucumis melo HOM05D002968 ORTHO05D003328 3.6e-09 65.5 60 60.0
MBI04_g42647_MAGBIO Magnolia biondii HOM05D002968 ORTHO05D003328 4.7e-09 65.1 89 48.3
Thecc.09G061600 Theobroma cacao HOM05D002968 ORTHO05D003328 4.7e-09 65.1 60 60.0
Ciclev10009915m.g Citrus clementina HOM05D002968 ORTHO05D003328 6.2e-09 64.7 96 45.8
Potri.006G222300 Populus trichocarpa HOM05D002968 ORTHO05D003328 2.4e-08 62.8 87 44.8
SEGI_06988 Sequoiadendron giganteum HOM05D002968 ORTHO05D003328 2.4e-08 62.8 128 39.8
Carub.0003s2728 Capsella rubella HOM05D002968 ORTHO05D003328 5.2e-08 61.6 58 60.3
TAR636G3144 Trochodendron aralioides HOM05D002968 ORTHO05D003328 6.8e-08 61.2 58 56.9
AL3G43810 Arabidopsis lyrata HOM05D002968 ORTHO05D003328 8.9e-08 60.8 58 56.9
AT2G06520 Arabidopsis thaliana HOM05D002968 ORTHO05D003328 8.9e-08 60.8 58 56.9
FvH4_1g08270 Fragaria vesca HOM05D002968 ORTHO05D003328 8.9e-08 60.8 90 45.6
FAN19G3048 Fragaria x ananassa HOM05D002968 ORTHO05D003328 8.9e-08 60.8 90 45.6
FAN23G0517 Fragaria x ananassa HOM05D002968 ORTHO05D003328 8.9e-08 60.8 90 45.6
Duzib150G1210 Durio zibethinus HOM05D002968 ORTHO05D003328 1.2e-07 60.5 55 60.0
Thhalv10003467m.g Eutrema salsugineum HOM05D002968 ORTHO05D003328 1.2e-07 60.5 55 60.0
MBI19_g11846_MAGBIO Magnolia biondii HOM05D002968 ORTHO05D003328 1.2e-07 60.5 123 39.8
TAR626G0835 Trochodendron aralioides HOM05D002968 ORTHO05D003328 1.2e-07 60.5 76 50.0
Cc08_g01300 Coffea canephora HOM05D002968 ORTHO05D003328 1.5e-07 60.1 82 46.3
RcHm_v2.0_Chr2g0094341 Rosa chinensis HOM05D002968 ORTHO05D003328 1.5e-07 60.1 90 45.6
RcHm_v2.0_Chr6g0311601 Rosa chinensis HOM05D002968 ORTHO05D003328 1.5e-07 60.1 58 56.9
Atru.chr7.1862 Acer truncatum HOM05D002968 ORTHO05D003328 2.6e-07 59.3 80 50.0
QL02p000175 Quercus lobata HOM05D002968 ORTHO05D003328 2.6e-07 59.3 127 40.2
GSVIVG01035449001 Vitis vinifera HOM05D002968 ORTHO05D003328 2.6e-07 59.3 93 46.2
BcaC06g35977 Brassica carinata HOM05D002968 ORTHO05D003328 4.4e-07 58.5 118 42.4
A07p06200 Brassica napus HOM05D002968 ORTHO05D003328 4.4e-07 58.5 118 42.4
C07p09260 Brassica napus HOM05D002968 ORTHO05D003328 4.4e-07 58.5 118 42.4
BolC7t41344H Brassica oleracea HOM05D002968 ORTHO05D003328 4.4e-07 58.5 118 42.4
BraA07t28418Z Brassica rapa HOM05D002968 ORTHO05D003328 4.4e-07 58.5 118 42.4
Dinv41836 Davidia involucrata HOM05D002968 ORTHO05D003328 4.4e-07 58.5 120 44.2
Psat6g022440 Pisum sativum HOM05D002968 ORTHO05D003328 4.4e-07 58.5 72 48.6
TAR383G1086 Trochodendron aralioides HOM05D002968 ORTHO05D003328 4.4e-07 58.5 93 41.9
Aa31LG8G11790 Aethionema arabicum HOM05D002968 ORTHO05D003328 5.8e-07 58.2 122 40.2
QL02p061035 Quercus lobata HOM05D002968 ORTHO05D003328 5.8e-07 58.2 129 42.6
Atru.chr7.1668 Acer truncatum HOM05D002968 ORTHO05D003328 7.6e-07 57.8 127 43.3
Sabra18G0058000 Salix brachista HOM05D002968 ORTHO05D003328 7.6e-07 57.8 126 42.1
FvH4_2g31210 Fragaria vesca HOM05D002968 ORTHO05D003328 9.9e-07 57.4 55 58.2
FAN15G0487 Fragaria x ananassa HOM05D002968 ORTHO05D003328 9.9e-07 57.4 55 58.2
FAN20G1073 Fragaria x ananassa HOM05D002968 ORTHO05D003328 9.9e-07 57.4 55 58.2
FAN27G0255 Fragaria x ananassa HOM05D000560 ORTHO05D000417 9.9e-07 57.4 55 58.2
TPR.G38854 Trifolium pratense HOM05D002968 ORTHO05D003328 9.9e-07 57.4 58 56.9
CSS0044489 Camellia sinensis var. sinensis HOM05D002968 ORTHO05D003328 1.3e-06 57.0 121 39.7
Thhalv10002124m.g Eutrema salsugineum HOM05D002968 ORTHO05D003328 1.3e-06 57.0 118 41.5
FAN24G1297 Fragaria x ananassa HOM05D002968 ORTHO05D003328 1.3e-06 57.0 55 58.2
FAN26G0986 Fragaria x ananassa HOM05D000560 ORTHO05D000417 1.3e-06 57.0 90 43.3
FAN26G2792 Fragaria x ananassa HOM05D002968 ORTHO05D003328 1.3e-06 57.0 90 43.3
TAR624G0082 Trochodendron aralioides HOM05D002968 ORTHO05D003328 1.3e-06 57.0 125 40.0
Cfa003027 Carpinus fangiana HOM05D002968 ORTHO05D003328 1.7e-06 56.6 128 43.0
CsaV3_2G001270 Cucumis sativus L. HOM05D002968 ORTHO05D003328 1.7e-06 56.6 123 40.7
Medtr1g015290 Medicago truncatula HOM05D002968 ORTHO05D003328 1.7e-06 56.6 58 55.2
Haze_25974 Corylus avellana HOM05D002968 ORTHO05D003328 2.2e-06 56.2 127 41.7
Nn6g35596 Nelumbo nucifera HOM05D002968 ORTHO05D003328 2.2e-06 56.2 131 43.5
Solyc05g025600.1 Solanum lycopersicum HOM05D002968 ORTHO05D003328 2.2e-06 56.2 58 56.9
Sopen05g020200 Solanum pennellii HOM05D002968 ORTHO05D003328 2.2e-06 56.2 58 56.9
TWI31G0942 Tripterygium wilfordii HOM05D002968 ORTHO05D003328 2.2e-06 56.2 125 38.4
TWI32G0186 Tripterygium wilfordii HOM05D002968 ORTHO05D003328 2.2e-06 56.2 125 38.4
Cfa016825 Carpinus fangiana HOM05D002968 ORTHO05D003328 2.9e-06 55.8 120 40.0
CDE06G0792 Ceratophyllum demersum HOM05D002968 ORTHO05D003328 2.9e-06 55.8 121 38.8
Nitab4.5_0000073g0060 Nicotiana tabacum HOM05D002968 ORTHO05D003328 2.9e-06 55.8 60 53.3
Peaxi162Scf00101g00142 Petunia axillaris HOM05D002968 ORTHO05D003328 2.9e-06 55.8 58 55.2
Potri.018G065200 Populus trichocarpa HOM05D002968 ORTHO05D003328 2.9e-06 55.8 128 42.2
unitig_748.g7535 Utricularia gibba HOM05D002968 ORTHO05D003328 2.9e-06 55.8 90 44.4
Gohir.A07G014066 Gossypium hirsutum HOM05D002968 ORTHO05D003328 3.8e-06 55.5 94 39.4
MBI13_g11356_MAGBIO Magnolia biondii HOM05D002968 ORTHO05D003328 3.8e-06 55.5 86 45.3
Nitab4.5_0004953g0010 Nicotiana tabacum HOM05D002968 ORTHO05D003328 3.8e-06 55.5 60 51.7
Nitab4.5_0009678g0020 Nicotiana tabacum HOM05D002968 ORTHO05D003328 3.8e-06 55.5 60 51.7
Glyma.04G055300 Glycine max HOM05D002968 ORTHO05D003328 4.9e-06 55.1 58 53.4
PGR044G0308 Punica granatum HOM05D002968 ORTHO05D003328 4.9e-06 55.1 129 41.1
unitig_0.g2736 Utricularia gibba HOM05D002968 ORTHO05D003328 4.9e-06 55.1 88 47.7
VMungo1309G0519 Vigna mungo HOM05D000560 ORTHO05D000417 4.9e-06 55.1 58 51.7
ClCG11G001540 Citrullus lanatus HOM05D002968 ORTHO05D003328 6.4e-06 54.7 127 38.6
Haze_18118 Corylus avellana HOM05D002968 ORTHO05D003328 6.4e-06 54.7 126 39.7
Lj1g0021647 Lotus japonicus HOM05D002968 ORTHO05D003328 6.4e-06 54.7 88 38.6
MD08G1070100 Malus domestica HOM05D002968 ORTHO05D003328 6.4e-06 54.7 56 57.1
Manes.03G038500 Manihot esculenta HOM05D002968 ORTHO05D003328 6.4e-06 54.7 127 39.4


User provided reference genes

Program Settings