Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 5.9e-112 407.5 204 100.0
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.4e-73 280.0 196 70.4
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 3.2e-73 278.9 198 69.7
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 4.2e-73 278.5 191 69.1
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 7.1e-73 277.7 199 68.8
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 1.6e-72 276.6 198 69.2
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 2.1e-72 276.2 199 69.3
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 2.1e-72 276.2 190 70.5
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.7e-72 275.8 199 69.3
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 4.6e-72 275.0 199 69.3
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 6.0e-72 274.6 198 69.2
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.0e-71 273.9 198 67.7
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.7e-71 273.1 199 67.8
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.7e-71 273.1 200 67.5
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 3.0e-71 272.3 198 67.2
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.9e-71 271.9 217 65.0
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.9e-71 271.9 217 65.0
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 3.9e-71 271.9 199 66.8
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 3.9e-71 271.9 199 68.3
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 5.1e-71 271.6 199 68.3
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 6.6e-71 271.2 198 66.2
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 8.7e-71 270.8 194 69.6
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.7e-71 270.8 194 69.6
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.7e-71 270.8 194 69.6
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.7e-71 270.8 194 69.6
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 8.7e-71 270.8 198 68.2
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 8.7e-71 270.8 200 67.0
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 1.1e-70 270.4 198 68.2
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 1.1e-70 270.4 198 66.7
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 1.5e-70 270.0 198 66.7
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 2.5e-70 269.2 200 67.5
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 2.5e-70 269.2 200 67.5
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 2.5e-70 269.2 200 67.5
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 2.5e-70 269.2 200 67.5
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 3.3e-70 268.9 198 67.2
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 4.3e-70 268.5 197 67.0
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 4.3e-70 268.5 199 65.3
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 4.3e-70 268.5 202 66.3
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 5.6e-70 268.1 195 66.7
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 7.3e-70 267.7 211 62.6
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 7.3e-70 267.7 191 66.0
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 7.3e-70 267.7 198 67.7
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 9.6e-70 267.3 197 67.5
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 9.6e-70 267.3 198 67.2
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 9.6e-70 267.3 216 63.4
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.3e-69 266.9 200 66.5
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.3e-69 266.9 201 64.2
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.3e-69 266.9 204 64.7
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 2.1e-69 266.2 201 66.2
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 2.1e-69 266.2 196 67.9
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 2.1e-69 266.2 198 66.2
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 2.1e-69 266.2 198 65.7
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.8e-69 265.8 201 63.7
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 2.8e-69 265.8 227 60.8
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 2.8e-69 265.8 198 68.2
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 2.8e-69 265.8 195 65.6
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 3.6e-69 265.4 197 67.5
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 4.8e-69 265.0 200 66.5
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 4.8e-69 265.0 212 63.7
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 6.2e-69 264.6 199 64.3
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 8.1e-69 264.2 200 65.0
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 8.1e-69 264.2 202 66.8
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 8.1e-69 264.2 198 65.2
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 8.1e-69 264.2 198 66.7
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 1.1e-68 263.8 200 65.0
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 1.1e-68 263.8 201 65.2
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.1e-68 263.8 199 64.8
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 1.4e-68 263.5 198 66.7
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.8e-68 263.1 200 64.0
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 1.8e-68 263.1 198 66.2
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.8e-68 263.1 198 66.7
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.8e-68 263.1 198 65.2
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 1.8e-68 263.1 199 65.8
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 1.8e-68 263.1 209 62.7
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 1.8e-68 263.1 201 66.2
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 2.4e-68 262.7 198 64.6
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 2.4e-68 262.7 195 66.7
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 2.4e-68 262.7 212 61.3
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 2.4e-68 262.7 194 67.5
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.4e-68 262.7 198 63.6
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 3.1e-68 262.3 197 67.0
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 3.1e-68 262.3 200 62.0
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 6.9e-68 261.2 200 64.0
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 6.9e-68 261.2 199 63.8
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 6.9e-68 261.2 198 64.1
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.2e-67 260.4 198 64.6
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.2e-67 260.4 198 64.6
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 1.2e-67 260.4 197 62.9
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 1.2e-67 260.4 200 63.0
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 1.5e-67 260.0 198 64.6
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 3.4e-67 258.8 198 64.6
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 3.4e-67 258.8 198 66.2
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 4.4e-67 258.5 185 69.7
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 5.8e-67 258.1 198 63.1
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.3e-66 256.9 197 66.5
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.1e-65 253.8 200 63.0
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 3.5e-64 248.8 190 65.3
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.7e-63 246.5 191 61.8
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 3.0e-63 245.7 200 61.0
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 6.6e-63 244.6 178 68.5
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 8.7e-63 244.2 184 66.3
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 2.4e-60 236.1 220 54.5
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 5.8e-59 231.5 204 56.9
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 7.6e-59 231.1 192 60.4
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.1e-57 227.3 190 62.6
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 2.4e-57 226.1 194 56.2
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.0e-50 204.1 167 60.5
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 6.5e-50 201.4 152 67.8
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 8.4e-50 201.1 205 51.2
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.4e-49 200.3 186 52.2
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 4.6e-48 195.3 152 62.5
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.1e-44 184.1 154 61.7
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 6.5e-42 174.9 137 60.6
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 1.1e-41 174.1 139 61.2
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.2e-40 170.6 140 57.9
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 4.6e-40 168.7 116 67.2
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 6.3e-37 158.3 112 68.8
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 5.0e-26 122.1 175 45.7
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 4.2e-25 119.0 98 60.2
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.2e-16 90.9 123 42.3
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 5.7e-14 82.0 68 57.4


User provided reference genes

Program Settings