Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 2.2e-79 298.9 153 100.0
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.6e-53 213.0 153 67.3
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.1e-53 212.6 153 66.7
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.1e-53 212.6 153 66.7
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 4.7e-53 211.5 152 67.8
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.0e-52 210.3 153 66.7
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 1.4e-52 209.9 153 66.7
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.8e-52 209.5 153 66.0
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.8e-52 209.5 153 66.0
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 3.0e-52 208.8 153 66.0
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.0e-52 208.8 153 66.0
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 4.0e-52 208.4 153 65.4
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 4.0e-52 208.4 153 66.0
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 5.2e-52 208.0 153 66.0
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 5.2e-52 208.0 153 66.0
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 5.2e-52 208.0 153 64.7
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 6.8e-52 207.6 153 64.7
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 8.8e-52 207.2 153 64.7
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 8.8e-52 207.2 153 64.7
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 8.8e-52 207.2 153 64.1
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 8.8e-52 207.2 153 65.4
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.2e-51 206.8 153 64.1
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 1.2e-51 206.8 153 64.7
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.2e-51 206.8 153 65.4
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.5e-51 206.5 153 64.7
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 3.4e-51 205.3 153 65.4
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 3.4e-51 205.3 153 64.7
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 3.4e-51 205.3 153 64.7
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 3.4e-51 205.3 153 64.7
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 5.7e-51 204.5 153 65.4
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 7.5e-51 204.1 153 63.4
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 7.5e-51 204.1 153 63.4
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 9.8e-51 203.8 153 65.4
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 9.8e-51 203.8 153 62.1
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 9.8e-51 203.8 153 64.1
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 9.8e-51 203.8 153 62.7
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 1.3e-50 203.4 153 63.4
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 1.3e-50 203.4 153 62.7
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 1.3e-50 203.4 153 62.7
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 1.3e-50 203.4 153 62.7
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.7e-50 203.0 153 63.4
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.7e-50 203.0 153 63.4
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.7e-50 203.0 153 65.4
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 2.8e-50 202.2 153 62.7
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 2.8e-50 202.2 153 63.4
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 3.7e-50 201.8 153 62.7
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 3.7e-50 201.8 153 62.7
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 3.7e-50 201.8 153 63.4
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 4.8e-50 201.4 153 62.1
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 4.8e-50 201.4 153 62.1
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 4.8e-50 201.4 153 62.7
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 4.8e-50 201.4 153 64.7
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 4.8e-50 201.4 153 62.7
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 6.3e-50 201.1 151 64.9
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 6.3e-50 201.1 153 60.1
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 6.3e-50 201.1 153 60.1
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 6.3e-50 201.1 153 62.1
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 6.3e-50 201.1 152 65.1
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 6.3e-50 201.1 153 61.4
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 6.3e-50 201.1 153 61.4
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 6.3e-50 201.1 153 63.4
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 6.3e-50 201.1 151 63.6
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 8.3e-50 200.7 153 61.4
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 1.1e-49 200.3 151 62.9
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.4e-49 199.9 151 61.6
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.4e-49 199.9 153 62.7
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.8e-49 199.5 153 60.1
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.8e-49 199.5 153 61.4
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.8e-49 199.5 153 61.4
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 1.8e-49 199.5 153 61.4
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 3.1e-49 198.7 151 62.9
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 4.1e-49 198.4 152 62.5
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 4.1e-49 198.4 153 59.5
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 4.1e-49 198.4 153 59.5
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 4.1e-49 198.4 153 60.8
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 4.1e-49 198.4 153 62.1
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 5.4e-49 198.0 151 60.3
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 5.4e-49 198.0 153 58.8
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 5.4e-49 198.0 153 60.1
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 5.4e-49 198.0 153 60.1
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 5.4e-49 198.0 153 58.8
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 9.1e-49 197.2 152 65.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 1.2e-48 196.8 151 61.6
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 1.2e-48 196.8 151 60.9
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 2.0e-48 196.1 153 62.1
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 2.0e-48 196.1 153 60.8
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 2.7e-48 195.7 151 61.6
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 2.7e-48 195.7 153 62.1
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 3.5e-48 195.3 151 62.3
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 4.5e-48 194.9 151 62.3
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 4.5e-48 194.9 153 60.8
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 5.9e-48 194.5 153 58.8
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 7.7e-48 194.1 153 61.4
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 7.7e-48 194.1 152 63.2
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.7e-47 193.0 150 60.7
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.2e-47 192.6 148 60.8
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.2e-47 192.6 148 60.8
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.8e-47 191.8 148 60.8
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 5.0e-47 191.4 146 63.7
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 6.5e-47 191.0 147 61.2
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 6.5e-47 191.0 152 61.8
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.9e-46 189.5 140 65.0
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 4.2e-46 188.3 152 59.2
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 3.6e-45 185.3 141 59.6
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 4.7e-45 184.9 153 63.4
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 4.0e-44 181.8 139 60.4
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.5e-43 179.9 143 60.8
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 9.8e-43 177.2 153 59.5
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 6.3e-42 174.5 132 61.4
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 3.1e-41 172.2 131 64.9
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 4.1e-41 171.8 131 62.6
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.2e-40 170.2 136 60.3
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.2e-40 170.2 130 60.8
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 3.5e-40 168.7 140 58.6
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.1e-38 163.7 118 66.9
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.5e-38 162.5 116 66.4
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.6e-37 159.8 120 63.3
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 4.7e-37 158.3 119 67.2
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 4.7e-37 158.3 121 61.2
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 3.0e-36 155.6 107 71.0
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 7.5e-35 151.0 106 68.9
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 9.8e-35 150.6 107 69.2
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 4.3e-30 135.2 129 53.5
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 1.2e-29 133.7 123 52.0
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 4.4e-27 125.2 91 67.0
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.1e-09 65.5 106 37.7


User provided reference genes

Program Settings