Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 0.0e+00 1161.4 610 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.1e-116 424.9 592 43.8
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 7.5e-110 402.1 602 40.9
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.8e-103 380.9 600 39.8
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 2.8e-101 373.6 596 38.9
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.4e-100 371.3 587 38.2
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 2.4e-100 370.5 591 38.4
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.4e-100 370.5 591 38.7
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 7.0e-100 369.0 592 39.0
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 7.0e-100 369.0 594 39.6
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 9.1e-100 368.6 589 38.4
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 9.1e-100 368.6 594 37.2
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.6e-99 367.9 591 38.1
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 3.5e-99 366.7 588 38.1
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 4.5e-99 366.3 588 39.8
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 4.5e-99 366.3 593 38.8
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 4.5e-99 366.3 602 38.4
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 7.7e-99 365.5 591 38.4
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.0e-98 365.2 588 37.9
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.0e-98 365.2 590 37.6
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.2e-98 364.0 589 39.4
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 3.8e-98 363.2 597 36.9
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.8e-98 363.2 589 37.7
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 6.5e-98 362.5 590 37.3
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 8.5e-98 362.1 596 38.1
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.5e-97 361.3 587 38.0
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.9e-97 360.9 590 38.5
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.9e-97 360.9 589 38.2
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 1.9e-97 360.9 594 37.4
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 2.5e-97 360.5 598 37.6
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.5e-97 360.5 594 36.7
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.2e-97 360.1 594 38.4
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 3.2e-97 360.1 599 38.2
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 4.2e-97 359.8 592 36.8
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 5.5e-97 359.4 589 38.5
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 5.5e-97 359.4 591 37.1
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 5.5e-97 359.4 587 38.3
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 7.2e-97 359.0 591 39.6
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 7.2e-97 359.0 587 37.1
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 7.2e-97 359.0 589 36.5
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 9.4e-97 358.6 594 38.2
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.6e-96 357.8 594 38.2
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.1e-96 357.5 590 36.4
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.1e-96 357.5 601 37.1
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 3.6e-96 356.7 587 36.8
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.7e-96 356.3 590 37.8
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 8.0e-96 355.5 590 38.0
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.0e-95 355.1 587 37.8
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.0e-95 355.1 587 36.8
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.0e-95 355.1 602 38.9
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.4e-95 354.8 593 38.1
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.8e-95 354.4 588 37.6
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.8e-95 354.4 590 37.3
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 1.8e-95 354.4 595 38.0
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.3e-95 354.0 595 38.0
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 4.0e-95 353.2 590 38.1
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.2e-95 352.8 595 37.0
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 6.8e-95 352.4 587 36.5
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 8.8e-95 352.1 591 39.1
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-94 351.7 601 36.9
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 1.5e-94 351.3 590 36.6
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.0e-94 350.9 605 36.2
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.6e-94 350.5 595 36.8
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 2.6e-94 350.5 619 38.0
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 4.4e-94 349.7 590 37.5
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 5.7e-94 349.4 589 38.4
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.3e-93 348.2 600 36.2
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.7e-93 347.8 590 37.6
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.7e-93 347.8 593 36.1
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 1.7e-93 347.8 589 37.0
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 2.8e-93 347.1 594 37.7
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 3.7e-93 346.7 587 36.5
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.7e-93 346.7 589 37.4
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 3.7e-93 346.7 613 35.7
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 4.9e-93 346.3 591 36.2
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 6.3e-93 345.9 590 39.0
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.8e-92 344.4 595 36.1
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 3.1e-92 343.6 590 35.9
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 2.0e-91 340.9 588 37.4
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 2.7e-91 340.5 591 36.7
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.7e-90 337.8 592 36.3
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 2.9e-90 337.0 597 36.9
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 5.0e-90 336.3 587 36.5
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 5.0e-90 336.3 587 36.5
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 5.0e-90 336.3 587 36.5
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 8.6e-90 335.5 590 35.8
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.1e-89 335.1 587 36.5
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.1e-89 335.1 587 36.5
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 4.3e-89 333.2 667 34.3
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 6.8e-87 325.9 659 33.5
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 2.0e-86 324.3 610 35.7
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 2.4e-84 317.4 601 35.9
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 5.4e-84 316.2 557 36.8
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.9e-82 310.1 590 36.1
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 8.6e-82 308.9 568 36.3
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 8.0e-80 302.4 564 34.9
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 8.9e-79 298.9 589 34.8
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 3.4e-78 297.0 589 37.0
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 9.2e-76 288.9 514 37.4
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.1e-73 282.0 513 34.3
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 2.1e-67 261.2 641 33.9
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.7e-61 240.4 222 52.3
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 4.9e-61 240.0 296 41.2
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 7.1e-60 236.1 483 34.0
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 2.1e-59 234.6 214 52.3
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 1.2e-46 192.2 166 54.2
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.5e-41 175.3 204 43.1
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.8e-39 168.3 444 31.1
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.3e-32 145.6 167 44.3
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.3e-32 145.6 167 45.5
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 3.7e-32 144.1 220 40.5
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 7.6e-22 109.8 160 37.5
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.3e-16 92.4 410 26.3
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.4e-15 89.0 175 33.7
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 3.8e-13 80.9 149 38.3
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-09 69.3 62 50.0
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.1e-07 62.8 141 33.3


User provided reference genes

Program Settings