Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g37232 Chara braunii HOM05D001177 ORTHO05D001507 0.0e+00 1370.5 740 100.0
CBR_g5666 Chara braunii HOM05D001177 ORTHO05D001507 7.6e-117 425.6 705 38.9
CBR_g5683 Chara braunii HOM05D001177 ORTHO05D001507 5.5e-115 419.5 660 39.4
BolC2t11472H Brassica oleracea HOM05D001177 ORTHO05D001507 1.6e-10 72.4 113 28.3
C02p54100 Brassica napus HOM05D001177 ORTHO05D001507 2.8e-10 71.6 113 28.3
BraA02t08540Z Brassica rapa HOM05D001177 ORTHO05D001507 3.7e-10 71.2 113 28.3
Psat0s1369g0280 Pisum sativum HOM05D001177 ORTHO05D001507 4.8e-10 70.9 105 33.3
Atru.chr6.2478 Acer truncatum HOM05D001177 ORTHO05D001507 8.1e-10 70.1 133 33.1
A02p35390 Brassica napus HOM05D001177 ORTHO05D001507 8.1e-10 70.1 113 27.4
Sopen02g038390 Solanum pennellii HOM05D001177 ORTHO05D001507 8.1e-10 70.1 102 33.3
CDE07G1758 Ceratophyllum demersum HOM05D001177 ORTHO05D001507 1.1e-09 69.7 105 31.4
Lj6g0000499 Lotus japonicus HOM05D001177 ORTHO05D001507 1.1e-09 69.7 106 33.0
Lalb_Chr24g0403421 Lupinus albus HOM05D001177 ORTHO05D001507 1.8e-09 68.9 107 30.8
Solyc02g093750.3 Solanum lycopersicum HOM05D001177 ORTHO05D001507 1.8e-09 68.9 102 32.4
Actinidia36158 Actinidia chinensis HOM05D001177 ORTHO05D001507 2.4e-09 68.6 106 31.1
arahy.Tifrunner.gnm1.ann1.1S388T Arachis hypogaea HOM05D001177 ORTHO05D001507 2.4e-09 68.6 110 31.8
CARHR148650 Cardamine hirsuta HOM05D001177 ORTHO05D001507 3.1e-09 68.2 113 25.7
BolC7t44157H Brassica oleracea HOM05D001177 ORTHO05D001507 4.0e-09 67.8 113 26.5
Cfa007286 Carpinus fangiana HOM05D001177 ORTHO05D001507 4.0e-09 67.8 113 31.9
Hma1.2p1_0279F.1_g112200 Hydrangea macrophylla HOM05D001177 ORTHO05D001507 4.0e-09 67.8 107 31.8
arahy.Tifrunner.gnm1.ann1.W74W8S Arachis hypogaea HOM05D001177 ORTHO05D001507 5.3e-09 67.4 110 30.9
CANSAT64G1555 Cannabis sativa HOM05D001177 ORTHO05D001507 5.3e-09 67.4 107 32.7
CDE04G3396 Ceratophyllum demersum HOM05D001177 ORTHO05D001507 5.3e-09 67.4 104 30.8
Dinv25699 Davidia involucrata HOM05D001177 ORTHO05D001507 5.3e-09 67.4 104 31.7
Potri.001G336766 Populus trichocarpa HOM05D001177 ORTHO05D001507 5.3e-09 67.4 133 32.3
C07p36380 Brassica napus HOM05D001177 ORTHO05D001507 6.9e-09 67.0 113 26.5
Ciclev10017544m.g Citrus clementina HOM05D001177 ORTHO05D001507 6.9e-09 67.0 113 31.9
PSO063G5680 Papaver somniferum HOM05D001177 ORTHO05D001507 6.9e-09 67.0 100 34.0
ATR0824G069 Amborella trichopoda HOM05D001177 ORTHO05D001507 9.0e-09 66.6 106 33.0
A06p41270 Brassica napus HOM05D001177 ORTHO05D001507 9.0e-09 66.6 113 26.5
BraA06t27051Z Brassica rapa HOM05D001177 ORTHO05D001507 9.0e-09 66.6 113 26.5
CSS0011940 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D001507 9.0e-09 66.6 104 28.8
CSS0013074 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D001507 9.0e-09 66.6 106 30.2
QL02p073163 Quercus lobata HOM05D001177 ORTHO05D001507 9.0e-09 66.6 110 31.8
CANSAT64G1637 Cannabis sativa HOM05D001177 ORTHO05D001507 1.2e-08 66.2 102 33.3
ECA246G4581 Erigeron canadensis HOM05D001177 ORTHO05D001507 1.2e-08 66.2 114 32.5
Migut.H00053 Erythranthe guttata HOM05D001177 ORTHO05D001507 1.2e-08 66.2 100 32.0
Sp2g16520 Schrenkiella parvula HOM05D001177 ORTHO05D001507 1.2e-08 66.2 112 25.9
AL5G16650 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 1.5e-08 65.9 113 25.7
AT3G27330 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 1.5e-08 65.9 113 25.7
BcaC06g31011 Brassica carinata HOM05D001177 ORTHO05D001507 1.5e-08 65.9 113 25.7
Cc08_g11720 Coffea canephora HOM05D001177 ORTHO05D001507 1.5e-08 65.9 109 33.0
MD09G1017900 Malus domestica HOM05D001177 ORTHO05D001507 1.5e-08 65.9 109 33.0
Oeu058752.1 Olea europaea HOM05D001177 ORTHO05D001507 1.5e-08 65.9 112 33.9
Rhsim10G0011700 Rhododendron simsii HOM05D001177 ORTHO05D001507 1.5e-08 65.9 106 28.3
Haze_14807 Corylus avellana HOM05D001177 ORTHO05D001507 2.0e-08 65.5 107 31.8
Thhalv10003629m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 2.0e-08 65.5 113 25.7
Lju41A46T89 Lonicera japonica HOM05D001177 ORTHO05D001507 2.0e-08 65.5 103 31.1
Glyma.19G081400 Glycine max HOM05D001177 ORTHO05D001507 2.6e-08 65.1 131 30.5
Phvul.008G147000 Phaseolus vulgaris HOM05D001177 ORTHO05D001507 2.6e-08 65.1 102 31.4
Manes.17G107700 Manihot esculenta HOM05D001177 ORTHO05D001507 3.4e-08 64.7 105 32.4
Peaxi162Scf00420g00220 Petunia axillaris HOM05D001177 ORTHO05D001507 3.4e-08 64.7 102 34.3
SGA_v2.0_scaffold166G38307 Striga asiatica HOM05D001177 ORTHO05D001507 3.4e-08 64.7 103 34.0
GSVIVG01003965001 Vitis vinifera HOM05D001177 ORTHO05D001507 3.4e-08 64.7 104 31.7
Aqoxy5G03571 Aquilegia oxysepala HOM05D001177 ORTHO05D001507 4.5e-08 64.3 102 32.4
Manes.15G156000 Manihot esculenta HOM05D001177 ORTHO05D001507 4.5e-08 64.3 101 32.7
Medtr2g028920 Medicago truncatula HOM05D001177 ORTHO05D001507 4.5e-08 64.3 103 31.1
TAR622G0035 Trochodendron aralioides HOM05D001177 ORTHO05D001507 4.5e-08 64.3 130 30.0
Zm00001eb173440 Zea mays HOM05D001177 ORTHO05D001507 4.5e-08 64.3 115 33.0
CiPaw.03G049800 Carya illinoinensis HOM05D001177 ORTHO05D001507 5.8e-08 63.9 124 28.2
Nitab4.5_0001863g0230 Nicotiana tabacum HOM05D001177 ORTHO05D001507 5.8e-08 63.9 105 33.3
Phvul.003G072900 Phaseolus vulgaris HOM05D001177 ORTHO05D001507 5.8e-08 63.9 101 30.7
PGR142G1038 Punica granatum HOM05D001177 ORTHO05D001507 5.8e-08 63.9 101 32.7
Rhsim10G0011800 Rhododendron simsii HOM05D001177 ORTHO05D001507 5.8e-08 63.9 124 26.6
PGSC0003DMG400020271 Solanum tuberosum HOM05D001177 ORTHO05D001507 5.8e-08 63.9 105 32.4
HanXRQChr14g0451011 Helianthus annuus HOM05D001177 ORTHO05D001507 7.6e-08 63.5 105 32.4
Nitab4.5_0001031g0120 Nicotiana tabacum HOM05D001177 ORTHO05D001507 7.6e-08 63.5 105 33.3
Thecc.04G025100 Theobroma cacao HOM05D001177 ORTHO05D001507 7.6e-08 63.5 108 30.6
CAN.G473.54 Capsicum annuum HOM05D001177 ORTHO05D001507 1.0e-07 63.2 105 30.5
Lju41A46T88 Lonicera japonica HOM05D001177 ORTHO05D001507 1.0e-07 63.2 102 29.4
Sabra16G0217600 Salix brachista HOM05D001177 ORTHO05D001507 1.0e-07 63.2 102 29.4
vmacro05918 Vaccinium macrocarpon HOM05D001177 ORTHO05D001507 1.0e-07 63.2 126 27.8
HPP92_011661 Vanilla planifolia HOM05D001177 ORTHO05D001507 1.0e-07 63.2 124 28.2
Carub.0005s0563 Capsella rubella HOM05D001177 ORTHO05D001507 1.3e-07 62.8 113 24.8
Ca_06622_v3 Cicer arietinum L. HOM05D001177 ORTHO05D001507 1.3e-07 62.8 129 28.7
ClCG11G006810 Citrullus lanatus HOM05D001177 ORTHO05D001507 1.3e-07 62.8 104 31.7
COL.COLO4_29270 Corchorus olitorius HOM05D001177 ORTHO05D001507 1.3e-07 62.8 104 30.8
Duzib264G0509 Durio zibethinus HOM05D001177 ORTHO05D001507 1.3e-07 62.8 106 28.3
Ca_05076_v3 Cicer arietinum L. HOM05D001177 ORTHO05D001507 1.7e-07 62.4 102 32.4
MELO3C008225.2 Cucumis melo HOM05D001177 ORTHO05D001507 1.7e-07 62.4 104 30.8
Oeu034102.1 Olea europaea HOM05D001177 ORTHO05D001507 1.7e-07 62.4 99 29.3
SEGI_40457 Sequoiadendron giganteum HOM05D001177 ORTHO05D001507 1.7e-07 62.4 369 22.8
VMungo0720G0730 Vigna mungo HOM05D001177 ORTHO05D001507 1.7e-07 62.4 107 30.8
CDE05G2199 Ceratophyllum demersum HOM05D001177 ORTHO05D001507 2.2e-07 62.0 123 28.5
Glyma.18G130100 Glycine max HOM05D001177 ORTHO05D001507 2.2e-07 62.0 129 27.1
Gohir.A09G032600 Gossypium hirsutum HOM05D001177 ORTHO05D001507 2.2e-07 62.0 107 29.0
Os08g0121900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D001507 2.2e-07 62.0 102 32.4
MSTRG.24062 Avicennia marina HOM05D001177 ORTHO05D001507 2.9e-07 61.6 104 31.7
FvH4_4g35330 Fragaria vesca HOM05D001177 ORTHO05D001507 2.9e-07 61.6 101 32.7
FAN12G0036 Fragaria x ananassa HOM05D001177 ORTHO05D001507 2.9e-07 61.6 101 32.7
FAN17G0702 Fragaria x ananassa HOM05D001177 ORTHO05D001507 2.9e-07 61.6 101 32.7
FAN22G1475 Fragaria x ananassa HOM05D001177 ORTHO05D001507 2.9e-07 61.6 101 32.7
Gohir.D09G032600 Gossypium hirsutum HOM05D001177 ORTHO05D001507 2.9e-07 61.6 107 29.0
Gorai.006G037600 Gossypium raimondii HOM05D001177 ORTHO05D001507 2.9e-07 61.6 107 29.0
Manes.01G194200 Manihot esculenta HOM05D001177 ORTHO05D001507 2.9e-07 61.6 101 32.7
Nn4g22454 Nelumbo nucifera HOM05D001177 ORTHO05D001507 2.9e-07 61.6 126 28.6
Oeu050436.1 Olea europaea HOM05D001177 ORTHO05D001507 2.9e-07 61.6 103 31.1
THA.LOC104823964 Tarenaya hassleriana HOM05D001177 ORTHO05D001507 2.9e-07 61.6 103 27.2
GSVIVG01020134001 Vitis vinifera HOM05D001177 ORTHO05D001507 3.8e-07 61.2 105 33.3
MSTRG.2371 Avicennia marina HOM05D001177 ORTHO05D001507 4.9e-07 60.8 101 32.7
CARHR213790 Cardamine hirsuta HOM05D001177 ORTHO05D001507 4.9e-07 60.8 102 26.5
CsaV3_6G001280 Cucumis sativus L. HOM05D001177 ORTHO05D001507 4.9e-07 60.8 104 30.8
Thhalv10028205m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 4.9e-07 60.8 130 27.7
Hma1.2p1_0289F.1_g114520 Hydrangea macrophylla HOM05D001177 ORTHO05D001507 4.9e-07 60.8 106 30.2
Lalb_Chr09g0326591 Lupinus albus HOM05D001177 ORTHO05D001507 4.9e-07 60.8 98 31.6
RcHm_v2.0_Chr4g0444941 Rosa chinensis HOM05D001177 ORTHO05D001507 4.9e-07 60.8 101 31.7
VMungo0251G2894 Vigna mungo HOM05D001177 ORTHO05D001507 4.9e-07 60.8 109 30.3
Eucgr.I01697 Eucalyptus grandis HOM05D001177 ORTHO05D001507 6.5e-07 60.5 103 30.1
Glyma.02G026500 Glycine max HOM05D001177 ORTHO05D001507 6.5e-07 60.5 99 31.3
MBI11_g32914_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D001507 6.5e-07 60.5 102 29.4
CSS0018087 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D001507 8.4e-07 60.1 102 28.4
CSS0027221 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D001507 8.4e-07 60.1 115 29.6
CSS0044035 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D001507 8.4e-07 60.1 115 29.6
Lsat_1_v5_gn_3_49241 Lactuca sativa HOM05D001177 ORTHO05D001507 8.4e-07 60.1 106 29.2
Lj2g0005552 Lotus japonicus HOM05D001177 ORTHO05D001507 8.4e-07 60.1 98 31.6
Lalb_Chr11g0061541 Lupinus albus HOM05D001177 ORTHO05D001507 8.4e-07 60.1 133 26.3
SalBow7G2506 Salvia bowleyana HOM05D001177 ORTHO05D001507 8.4e-07 60.1 120 30.8
Sed0025932 Sechium edule HOM05D001177 ORTHO05D001507 8.4e-07 60.1 104 31.7
TWI36G1408 Tripterygium wilfordii HOM05D001177 ORTHO05D001507 8.4e-07 60.1 120 28.3
Lsat_1_v5_gn_2_93580 Lactuca sativa HOM05D001177 ORTHO05D001507 1.1e-06 59.7 104 28.8
Lalb_Chr23g0265721 Lupinus albus HOM05D001177 ORTHO05D001507 1.1e-06 59.7 118 29.7
MBI08_g26555_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D001507 1.1e-06 59.7 98 30.6
Os06g0727900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D001507 1.1e-06 59.7 100 31.0
Prupe.3G299100 Prunus persica HOM05D001177 ORTHO05D001507 1.1e-06 59.7 105 31.4
THA.LOC104825305 Tarenaya hassleriana HOM05D001177 ORTHO05D001507 1.1e-06 59.7 103 28.2
Glyma.01G038500 Glycine max HOM05D001177 ORTHO05D001507 1.4e-06 59.3 99 30.3
Phvul.002G078300 Phaseolus vulgaris HOM05D001177 ORTHO05D001507 1.4e-06 59.3 118 29.7
SEGI_00116 Sequoiadendron giganteum HOM05D001177 ORTHO05D001507 1.4e-06 59.3 280 21.4
SGA_v2.0_scaffold47G17542 Striga asiatica HOM05D001177 ORTHO05D001507 1.4e-06 59.3 101 32.7
Dinv24929 Davidia involucrata HOM05D001177 ORTHO05D001507 1.9e-06 58.9 100 31.0
Mapoly0007s0020 Marchantia polymorpha HOM05D001177 ORTHO05D001507 1.9e-06 58.9 102 31.4
Nitab4.5_0001030g0100 Nicotiana tabacum HOM05D001177 ORTHO05D001507 1.9e-06 58.9 100 30.0
VMungo1215G1136 Vigna mungo HOM05D001177 ORTHO05D001507 1.9e-06 58.9 101 30.7
Actinidia08195 Actinidia chinensis HOM05D001177 ORTHO05D001507 2.5e-06 58.5 101 28.7
ATR0712G160 Amborella trichopoda HOM05D001177 ORTHO05D001507 2.5e-06 58.5 127 29.9
AT5G40720 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 2.5e-06 58.5 102 26.5
FAN07G0676 Fragaria x ananassa HOM05D001177 ORTHO05D001507 2.5e-06 58.5 101 31.7
Lalb_Chr16g0382611 Lupinus albus HOM05D001177 ORTHO05D001507 2.5e-06 58.5 98 30.6
Manes.05G093600 Manihot esculenta HOM05D001177 ORTHO05D001507 2.5e-06 58.5 99 32.3
Mapoly0077s0009 Marchantia polymorpha HOM05D001177 ORTHO05D001507 2.5e-06 58.5 113 29.2
AL7G49020 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 3.2e-06 58.2 102 26.5
BcaC07g39241 Brassica carinata HOM05D001177 ORTHO05D001507 3.2e-06 58.2 103 30.1
Rhsim06G0006200 Rhododendron simsii HOM05D001177 ORTHO05D001507 3.2e-06 58.2 102 32.4
SHI20713 Sapria himalayana HOM05D001177 ORTHO05D001507 3.2e-06 58.2 101 31.7
MSTRG.13392 Avicennia marina HOM05D001177 ORTHO05D001507 4.2e-06 57.8 100 32.0
CAN.G1694.2 Capsicum annuum HOM05D001177 ORTHO05D001507 4.2e-06 57.8 100 29.0
Migut.O00321 Erythranthe guttata HOM05D001177 ORTHO05D001507 4.2e-06 57.8 133 30.1
Aa31LG9G920 Aethionema arabicum HOM05D001177 ORTHO05D001507 5.5e-06 57.4 102 27.5
Ah.02g131670 Amaranthus hybridus HOM05D001177 ORTHO05D001507 5.5e-06 57.4 112 29.5
C08p22460 Brassica napus HOM05D001177 ORTHO05D001507 5.5e-06 57.4 103 30.1
BolC6t37128H Brassica oleracea HOM05D001177 ORTHO05D001507 5.5e-06 57.4 104 26.0
BraA08t34714Z Brassica rapa HOM05D001177 ORTHO05D001507 5.5e-06 57.4 124 29.0
CiPaw.05G144100 Carya illinoinensis HOM05D001177 ORTHO05D001507 5.5e-06 57.4 98 30.6
Migut.L01373 Erythranthe guttata HOM05D001177 ORTHO05D001507 5.5e-06 57.4 105 30.5
Eucgr.B03384 Eucalyptus grandis HOM05D001177 ORTHO05D001507 5.5e-06 57.4 99 29.3
Glyma.08G293200 Glycine max HOM05D001177 ORTHO05D001507 5.5e-06 57.4 120 26.7
Aqoxy3G03166 Aquilegia oxysepala HOM05D001177 ORTHO05D001507 7.1e-06 57.0 122 27.0
BraA07t29741Z Brassica rapa HOM05D001177 ORTHO05D001507 7.1e-06 57.0 102 26.5
Nitab4.5_0011499g0010 Nicotiana tabacum HOM05D001177 ORTHO05D001507 7.1e-06 57.0 100 29.0
Sed0017932 Sechium edule HOM05D001177 ORTHO05D001507 7.1e-06 57.0 99 28.3
BcaB02g07931 Brassica carinata HOM05D001177 ORTHO05D001507 9.3e-06 56.6 104 25.0
BcaC08g44478 Brassica carinata HOM05D001177 ORTHO05D001507 9.3e-06 56.6 104 26.0
A08p27820 Brassica napus HOM05D001177 ORTHO05D001507 9.3e-06 56.6 101 30.7
Cpa.g.sc5.316 Carica papaya HOM05D001177 ORTHO05D001507 9.3e-06 56.6 98 30.6
Oeu026026.1 Olea europaea HOM05D001177 ORTHO05D001507 9.3e-06 56.6 115 33.0
Oeu044539.2 Olea europaea HOM05D001177 ORTHO05D001507 9.3e-06 56.6 98 31.6
SalBow7G2910 Salvia bowleyana HOM05D001177 ORTHO05D001507 9.3e-06 56.6 115 35.7
Sc11g0001500 Simmondsia chinensis HOM05D001177 ORTHO05D001507 9.3e-06 56.6 99 30.3


User provided reference genes

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