Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g37151 Chara braunii HOM05D007198 ORTHO05D008969 4.4e-86 321.2 160 100.0
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 3.7e-24 115.5 160 43.8
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 6.4e-21 104.8 161 35.4
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 2.5e-20 102.8 165 38.8
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 5.5e-20 101.7 163 39.3
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 2.1e-19 99.8 161 36.6
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 3.5e-19 99.0 160 36.9
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 6.0e-19 98.2 164 37.2
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 6.0e-19 98.2 163 35.6
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 7.9e-19 97.8 161 36.0
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 7.9e-19 97.8 161 36.0
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 1.0e-18 97.4 161 35.4
MELO3C007557.2 Cucumis melo HOM05D007198 ORTHO05D008969 1.0e-18 97.4 160 36.2
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 1.0e-18 97.4 161 36.0
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 1.3e-18 97.1 159 37.1
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 1.3e-18 97.1 161 34.8
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 1.3e-18 97.1 161 35.4
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 2.3e-18 96.3 161 34.8
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 2.3e-18 96.3 161 34.8
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 2.3e-18 96.3 162 37.7
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 3.9e-18 95.5 160 36.9
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 3.9e-18 95.5 161 35.4
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 3.9e-18 95.5 160 36.2
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 5.1e-18 95.1 160 37.5
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 5.1e-18 95.1 164 35.4
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 6.7e-18 94.7 164 36.6
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 6.7e-18 94.7 160 35.0
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 6.7e-18 94.7 164 36.0
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 8.7e-18 94.4 161 35.4
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 8.7e-18 94.4 161 35.4
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 8.7e-18 94.4 161 34.2
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 8.7e-18 94.4 154 35.7
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 1.1e-17 94.0 164 36.6
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 1.1e-17 94.0 165 36.4
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 1.1e-17 94.0 161 34.8
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 1.1e-17 94.0 161 34.2
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 1.1e-17 94.0 160 34.4
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 1.5e-17 93.6 163 35.6
Lj4A144T46 Lonicera japonica HOM05D007198 ORTHO05D008969 1.5e-17 93.6 159 34.0
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 1.9e-17 93.2 161 36.0
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 1.9e-17 93.2 162 34.0
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 2.5e-17 92.8 161 34.2
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 2.5e-17 92.8 161 33.5
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 2.5e-17 92.8 159 36.5
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 3.3e-17 92.4 160 35.6
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 3.3e-17 92.4 161 36.0
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 5.6e-17 91.7 157 36.9
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 5.6e-17 91.7 161 32.9
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 7.4e-17 91.3 161 35.4
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 7.4e-17 91.3 156 33.3
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 7.4e-17 91.3 164 34.1
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 7.4e-17 91.3 161 34.2
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 9.6e-17 90.9 159 34.6
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 1.3e-16 90.5 160 34.4
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 1.3e-16 90.5 161 32.9
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 1.6e-16 90.1 155 34.2
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 1.6e-16 90.1 161 34.2
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 2.1e-16 89.7 154 31.8
Cpa.g.sc55.159 Carica papaya HOM05D007198 ORTHO05D008969 2.8e-16 89.4 156 35.3
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 3.7e-16 89.0 158 35.4
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 3.7e-16 89.0 160 34.4
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 4.8e-16 88.6 165 34.5
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 4.8e-16 88.6 171 32.7
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 6.2e-16 88.2 158 35.4
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 6.2e-16 88.2 158 32.9
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 8.2e-16 87.8 161 32.9
PGSC0003DMG402015781 Solanum tuberosum HOM05D007198 ORTHO05D008969 8.2e-16 87.8 132 36.4
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 1.1e-15 87.4 120 37.5
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 1.1e-15 87.4 156 34.6
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 1.1e-15 87.4 161 32.9
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 1.8e-15 86.7 155 31.6
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 1.8e-15 86.7 159 34.0
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 2.4e-15 86.3 157 35.7
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 2.4e-15 86.3 162 30.9
MD10G1272600 Malus domestica HOM05D007198 ORTHO05D008969 3.1e-15 85.9 160 31.9
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 3.1e-15 85.9 161 34.2
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 4.0e-15 85.5 153 34.0
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 6.9e-15 84.7 129 37.2
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 9.0e-15 84.3 153 33.3
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 9.0e-15 84.3 158 32.9
MD14G1074900 Malus domestica HOM05D007198 ORTHO05D008969 1.2e-14 84.0 160 30.6
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 2.6e-14 82.8 153 33.3
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 4.5e-14 82.0 164 34.1
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 5.8e-14 81.6 152 32.2
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 1.0e-13 80.9 160 30.0
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 1.0e-13 80.9 170 30.6
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 1.7e-13 80.1 161 32.9
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 1.4e-12 77.0 119 37.8
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 1.9e-12 76.6 154 32.5
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 4.2e-12 75.5 160 33.8
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 1.6e-11 73.6 156 30.1
SEGI_34131 Sequoiadendron giganteum HOM05D007198 ORTHO05D008969 4.6e-11 72.0 120 35.0
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 1.0e-10 70.9 85 41.2
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 1.8e-10 70.1 96 38.5
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 8.7e-10 67.8 152 29.6
Actinidia03790 Actinidia chinensis HOM05D007198 ORTHO05D008969 1.5e-09 67.0 89 37.1
unitig_899.g14658 Utricularia gibba HOM05D007198 ORTHO05D008969 4.3e-09 65.5 118 35.6
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 2.2e-08 63.2 79 41.8
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 9.0e-07 57.8 86 36.0
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 9.0e-07 57.8 79 39.2
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 7.7e-06 54.7 83 37.3


User provided reference genes

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