Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 2.0e-143 512.3 244 100.0
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 2.6e-69 266.2 174 70.1
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 4.1e-67 258.8 185 65.9
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 3.4e-66 255.8 173 68.8
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 3.8e-65 252.3 171 66.7
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.7e-63 246.1 172 67.4
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.4e-62 243.8 172 65.1
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.8e-62 243.4 204 57.4
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 5.2e-62 241.9 171 66.1
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 5.2e-62 241.9 172 65.1
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 2.6e-61 239.6 172 65.7
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 2.6e-61 239.6 172 64.5
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 2.6e-61 239.6 172 64.5
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 3.3e-61 239.2 172 64.0
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 3.3e-61 239.2 172 64.0
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 4.4e-61 238.8 172 64.0
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 4.4e-61 238.8 172 65.7
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 4.4e-61 238.8 183 60.7
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 1.3e-60 237.3 172 63.4
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 1.7e-60 236.9 172 65.1
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 1.7e-60 236.9 172 66.3
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 2.2e-60 236.5 172 64.5
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 2.2e-60 236.5 172 64.5
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.8e-60 236.1 173 62.4
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 2.8e-60 236.1 172 63.4
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 2.8e-60 236.1 172 65.1
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 2.8e-60 236.1 172 64.0
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 2.8e-60 236.1 172 63.4
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 2.8e-60 236.1 173 65.3
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 2.8e-60 236.1 173 64.7
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 3.7e-60 235.7 172 63.4
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 3.7e-60 235.7 172 64.5
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 4.8e-60 235.3 172 64.5
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 4.8e-60 235.3 172 65.1
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 4.8e-60 235.3 172 65.1
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 4.8e-60 235.3 173 64.2
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 6.3e-60 235.0 172 64.5
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 6.3e-60 235.0 172 64.5
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 6.3e-60 235.0 172 64.5
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 8.2e-60 234.6 179 62.0
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 8.2e-60 234.6 179 62.0
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 8.2e-60 234.6 173 64.7
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 8.2e-60 234.6 171 65.5
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 8.2e-60 234.6 172 62.8
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 1.1e-59 234.2 172 63.4
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 1.1e-59 234.2 172 64.0
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.1e-59 234.2 179 61.5
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 1.1e-59 234.2 172 62.2
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 1.4e-59 233.8 173 65.3
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 1.4e-59 233.8 172 62.2
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 1.4e-59 233.8 172 62.8
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 1.8e-59 233.4 172 62.8
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 1.8e-59 233.4 172 62.8
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 1.8e-59 233.4 172 62.8
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 1.8e-59 233.4 172 63.4
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 2.4e-59 233.0 172 64.5
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 2.4e-59 233.0 173 63.0
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 2.4e-59 233.0 172 62.8
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.4e-59 233.0 172 62.8
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 2.4e-59 233.0 187 58.8
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 2.4e-59 233.0 172 62.8
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.1e-59 232.6 174 63.2
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 3.1e-59 232.6 172 64.0
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 4.1e-59 232.3 172 64.0
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 4.1e-59 232.3 172 62.8
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 4.1e-59 232.3 173 64.2
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 4.1e-59 232.3 172 63.4
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 5.3e-59 231.9 172 61.6
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 5.3e-59 231.9 175 64.0
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 5.3e-59 231.9 173 64.2
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 5.3e-59 231.9 175 62.9
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 5.3e-59 231.9 175 62.3
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 5.3e-59 231.9 173 61.3
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 5.3e-59 231.9 172 62.2
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 7.0e-59 231.5 172 64.5
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 7.0e-59 231.5 173 63.6
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 7.0e-59 231.5 175 63.4
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 7.0e-59 231.5 172 63.4
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 9.1e-59 231.1 172 62.8
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 1.2e-58 230.7 172 61.6
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 1.6e-58 230.3 173 63.0
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 1.6e-58 230.3 173 62.4
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 1.6e-58 230.3 175 62.9
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 1.6e-58 230.3 172 64.0
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 1.6e-58 230.3 172 61.6
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 1.6e-58 230.3 172 62.8
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 2.6e-58 229.6 173 63.0
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 2.6e-58 229.6 172 62.8
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.5e-58 229.2 172 63.4
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 4.5e-58 228.8 172 60.5
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 4.5e-58 228.8 174 63.2
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 5.9e-58 228.4 179 59.8
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 5.9e-58 228.4 172 62.2
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 5.9e-58 228.4 176 62.5
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 1.7e-57 226.9 182 61.5
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 2.9e-57 226.1 173 63.6
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 7.2e-56 221.5 167 61.1
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 7.2e-56 221.5 166 62.0
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 3.6e-55 219.2 159 62.9
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 8.0e-55 218.0 164 64.0
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 2.0e-53 213.4 159 63.5
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 3.3e-53 212.6 158 62.7
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 7.5e-53 211.5 157 63.7
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 7.5e-53 211.5 157 63.7
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 9.7e-53 211.1 157 63.7
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 2.2e-52 209.9 158 62.0
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 3.7e-52 209.1 157 63.7
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 6.3e-52 208.4 158 61.4
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 1.1e-51 207.6 176 58.5
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 2.4e-51 206.5 158 60.8
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.4e-51 206.5 157 60.5
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 3.1e-51 206.1 158 60.8
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 3.1e-51 206.1 158 60.8
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 2.0e-50 203.4 158 60.8
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 8.5e-49 198.0 154 63.0
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 4.2e-48 195.7 150 60.7
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 7.5e-45 184.9 142 60.6
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 1.2e-42 177.6 136 61.0
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 2.7e-42 176.4 145 57.9
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 4.2e-40 169.1 173 51.4
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 3.5e-34 149.4 172 47.7
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 5.0e-33 145.6 172 47.1
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 6.6e-33 145.2 88 71.6
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 2.3e-30 136.7 168 44.6
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 2.3e-30 136.7 195 42.1
CBR_g48981 Chara braunii HOM05D000228 ORTHO05D005112 1.7e-20 104.0 50 98.0
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 4.3e-16 89.4 122 44.3
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 3.6e-07 59.7 34 70.6


User provided reference genes

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