Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g36281 Chara braunii HOM05D003532 ORTHO05D003298 0.0e+00 2230.7 1104 100.0
CBR_g57789 Chara braunii HOM05D003532 ORTHO05D003298 0.0e+00 1332.8 1181 62.9
CBR_g12185 Chara braunii HOM05D003532 ORTHO05D003298 0.0e+00 1198.3 874 72.1
CBR_g38597 Chara braunii HOM05D003532 ORTHO05D003298 1.2e-288 996.9 1152 51.0
CBR_g38599 Chara braunii HOM05D003532 ORTHO05D003298 4.7e-264 915.2 1157 48.4
CBR_g38594 Chara braunii HOM05D003532 ORTHO05D003298 1.7e-245 853.6 514 83.3
CBR_g38595 Chara braunii HOM05D003532 ORTHO05D003298 7.6e-238 828.2 1026 49.4
CBR_g38576 Chara braunii HOM05D003532 ORTHO05D003298 3.1e-199 699.9 496 71.8
CBR_g38589 Chara braunii HOM05D003532 ORTHO05D003298 4.7e-187 659.4 473 70.4
CBR_g12182 Chara braunii HOM05D003532 ORTHO05D003298 8.8e-186 655.2 471 70.1
CBR_g40961 Chara braunii HOM05D003532 ORTHO05D000353 4.2e-127 460.3 1172 30.5
CBR_g12186 Chara braunii HOM05D003532 ORTHO05D003298 6.5e-104 383.3 213 88.7
CBR_g31612 Chara braunii HOM05D000004 ORTHO05D000002 4.3e-100 370.5 209 91.4
CBR_g85241 Chara braunii HOM05D003532 ORTHO05D003298 8.2e-99 366.3 283 67.8
CBR_g25809 Chara braunii HOM05D011700 ORTHO05D014180 1.8e-98 365.2 203 94.1
CBR_g37739 Chara braunii HOM05D001523 ORTHO05D132532 3.1e-98 364.4 202 93.6
CBR_g45627 Chara braunii HOM05D003532 ORTHO05D003298 2.1e-70 271.9 1085 24.6
CBR_g46414 Chara braunii HOM05D003532 ORTHO05D003298 1.6e-65 255.8 1133 23.7
CBR_g3457 Chara braunii HOM05D000004 ORTHO05D000002 1.5e-63 249.2 200 64.0
CBR_g12867 Chara braunii HOM05D000019 ORTHO05D003298 3.0e-61 241.5 494 31.6
CBR_g12864 Chara braunii HOM05D003532 ORTHO05D003298 2.6e-60 238.4 491 31.0
CBR_g40030 Chara braunii HOM05D007859 ORTHO05D003298 1.2e-57 229.6 486 31.3
CBR_g46001 Chara braunii HOM05D003532 ORTHO05D003298 4.4e-44 184.5 757 23.9
CBR_g12865 Chara braunii HOM05D003532 ORTHO05D003298 3.0e-40 171.8 261 41.8
CBR_g12862 Chara braunii HOM05D003532 ORTHO05D003298 5.4e-34 151.0 394 28.7
CBR_g59385 Chara braunii HOM05D002830 ORTHO05D137208 2.7e-17 95.5 63 76.2
Hund23137 Selenicereus undatus HOM05D003532 ORTHO05D003298 6.0e-17 94.4 421 24.0
AagrBONN_evm.TU.Sc2ySwM_340.760 Anthoceros agrestis HOM05D008597 ORTHO05D003298 7.9e-17 94.0 294 29.3
Haze_09779 Corylus avellana HOM05D003532 ORTHO05D003298 7.9e-17 94.0 416 24.3
PSO210G6712 Papaver somniferum HOM05D003532 ORTHO05D003298 1.7e-16 92.8 332 28.0
AagrBONN_evm.TU.Sc2ySwM_362.2762 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.1e-15 90.1 294 27.9
AagrBONN_evm.TU.Sc2ySwM_368.1056 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.1e-15 90.1 399 23.1
arahy.Tifrunner.gnm1.ann1.IRWJ3E Arachis hypogaea HOM05D003532 ORTHO05D003298 1.1e-15 90.1 409 24.4
Cfa020236 Carpinus fangiana HOM05D003532 ORTHO05D003298 1.1e-15 90.1 417 23.7
arahy.Tifrunner.gnm1.ann1.5HZ9E9 Arachis hypogaea HOM05D003532 ORTHO05D003298 1.5e-15 89.7 409 24.4
Mapoly0143s0004 Marchantia polymorpha HOM05D011635 ORTHO05D022906 1.9e-15 89.4 147 36.1
Prupe.4G231800 Prunus persica HOM05D003532 ORTHO05D003298 4.3e-15 88.2 482 24.3
Ca_16739_v3 Cicer arietinum L. HOM05D003532 ORTHO05D003298 7.4e-15 87.4 370 26.2
Manes.15G064000 Manihot esculenta HOM05D003532 ORTHO05D003298 7.4e-15 87.4 417 24.0
Ciclev10007256m.g Citrus clementina HOM05D003532 ORTHO05D003298 1.3e-14 86.7 407 23.8
Psat5g171200 Pisum sativum HOM05D003532 ORTHO05D003298 2.8e-14 85.5 366 25.1
Atru.chr2.3624 Acer truncatum HOM05D003532 ORTHO05D003298 4.8e-14 84.7 411 23.1
Aqoxy1G04019 Aquilegia oxysepala HOM05D003532 ORTHO05D003298 4.8e-14 84.7 330 26.1
COL.COLO4_09777 Corchorus olitorius HOM05D003532 ORTHO05D003298 4.8e-14 84.7 424 23.6
Duzib213G0377 Durio zibethinus HOM05D003532 ORTHO05D003298 4.8e-14 84.7 419 23.9
Migut.M01683 Erythranthe guttata HOM05D003532 ORTHO05D003298 4.8e-14 84.7 379 24.3
QL08p005936 Quercus lobata HOM05D003532 ORTHO05D003298 4.8e-14 84.7 415 23.6
Sc07g0002980 Simmondsia chinensis HOM05D003532 ORTHO05D003298 4.8e-14 84.7 323 24.5
THA.LOC104811650 Tarenaya hassleriana HOM05D003532 ORTHO05D003298 4.8e-14 84.7 342 23.7
CAN.G1166.13 Capsicum annuum HOM05D003532 ORTHO05D003298 6.2e-14 84.3 406 22.7
Glyma.18G081800 Glycine max HOM05D003532 ORTHO05D003298 6.2e-14 84.3 448 23.2
CDE04G0250 Ceratophyllum demersum HOM05D003532 ORTHO05D003298 8.1e-14 84.0 368 25.0
Glyma.08G325400 Glycine max HOM05D003532 ORTHO05D003298 1.1e-13 83.6 366 24.9
Medtr3g055970 Medicago truncatula HOM05D003532 ORTHO05D003298 1.1e-13 83.6 410 23.9
Nn1g07430 Nelumbo nucifera HOM05D003532 ORTHO05D003298 1.1e-13 83.6 499 21.8
ECA240G1125 Erigeron canadensis HOM05D003532 ORTHO05D003298 1.4e-13 83.2 367 24.5
Sp6g17430 Schrenkiella parvula HOM05D003532 ORTHO05D003298 1.4e-13 83.2 430 25.3
TAR631G0007 Trochodendron aralioides HOM05D003532 ORTHO05D003298 1.4e-13 83.2 330 24.2
CARHR268860 Cardamine hirsuta HOM05D003532 ORTHO05D003298 2.4e-13 82.4 342 25.1
Lalb_Chr15g0081911 Lupinus albus HOM05D003532 ORTHO05D003298 2.4e-13 82.4 322 25.5
DCAR_016631 Daucus carota HOM05D003532 ORTHO05D003298 3.1e-13 82.0 332 24.7
Gohir.D01G072800 Gossypium hirsutum HOM05D003532 ORTHO05D003298 3.1e-13 82.0 424 24.3
FAN21G0475 Fragaria x ananassa HOM05D003532 ORTHO05D003298 4.0e-13 81.6 411 23.6
FAN25G2872 Fragaria x ananassa HOM05D003532 ORTHO05D003298 4.0e-13 81.6 411 23.4
Gohir.A01G086600 Gossypium hirsutum HOM05D003532 ORTHO05D003298 4.0e-13 81.6 424 24.3
Dinv10304 Davidia involucrata HOM05D003532 ORTHO05D003298 5.3e-13 81.3 361 23.3
Gorai.002G095800 Gossypium raimondii HOM05D003532 ORTHO05D003298 5.3e-13 81.3 424 24.1
Lj6g0018545 Lotus japonicus HOM05D003532 ORTHO05D003298 5.3e-13 81.3 408 24.0
AagrBONN_evm.TU.Sc2ySwM_362.460 Anthoceros agrestis HOM05D002844 ORTHO05D003298 6.9e-13 80.9 358 23.5
FAN25G3696 Fragaria x ananassa HOM05D003532 ORTHO05D003298 6.9e-13 80.9 410 23.2
Cpa.g.sc12.202 Carica papaya HOM05D003532 ORTHO05D003298 9.0e-13 80.5 472 22.5
FvH4_3g23950 Fragaria vesca HOM05D003532 ORTHO05D003298 9.0e-13 80.5 410 23.4
FAN11G2286 Fragaria x ananassa HOM05D003532 ORTHO05D003298 9.0e-13 80.5 410 23.4
Lsat_1_v5_gn_0_15220 Lactuca sativa HOM05D003532 ORTHO05D003298 9.0e-13 80.5 371 23.2
RcHm_v2.0_Chr5g0042451 Rosa chinensis HOM05D003532 ORTHO05D003298 1.2e-12 80.1 325 24.3
TPR.G1921 Trifolium pratense HOM05D003532 ORTHO05D003298 1.2e-12 80.1 365 25.2
Sabra16G0238200 Salix brachista HOM05D003532 ORTHO05D003298 1.5e-12 79.7 444 23.2
MD03G1189500 Malus domestica HOM05D003532 ORTHO05D003298 2.0e-12 79.3 413 24.2
Mapoly0007s0136 Marchantia polymorpha HOM05D005435 ORTHO05D007370 2.0e-12 79.3 390 23.3
Nitab4.5_0002423g0060 Nicotiana tabacum HOM05D003532 ORTHO05D003298 2.0e-12 79.3 327 24.2
Phvul.006G052900 Phaseolus vulgaris HOM05D003532 ORTHO05D003298 2.6e-12 79.0 454 22.5
TWI39G0358 Tripterygium wilfordii HOM05D003532 ORTHO05D003298 2.6e-12 79.0 370 24.1
Potri.001G361200 Populus trichocarpa HOM05D003532 ORTHO05D003298 3.4e-12 78.6 416 23.1
AagrBONN_evm.TU.Sc2ySwM_368.264 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.5e-12 78.2 440 22.7
CsaV3_7G018660 Cucumis sativus L. HOM05D003532 ORTHO05D003298 4.5e-12 78.2 417 23.3
Carub.0008s1589 Capsella rubella HOM05D003532 ORTHO05D003298 5.8e-12 77.8 424 23.6
Mapoly0072s0037 Marchantia polymorpha HOM05D003532 ORTHO05D003298 5.8e-12 77.8 420 22.9
Nitab4.5_0003218g0080 Nicotiana tabacum HOM05D003532 ORTHO05D003298 5.8e-12 77.8 327 23.5
Thecc.07G023400 Theobroma cacao HOM05D003532 ORTHO05D003298 5.8e-12 77.8 419 23.4
Actinidia00098 Actinidia chinensis HOM05D003532 ORTHO05D003298 7.6e-12 77.4 319 24.1
ATR0712G118 Amborella trichopoda HOM05D003532 ORTHO05D003298 7.6e-12 77.4 326 24.8
Solyc03g112750.4 Solanum lycopersicum HOM05D003532 ORTHO05D003298 7.6e-12 77.4 347 24.5
AagrBONN_evm.TU.Sc2ySwM_117.2267 Anthoceros agrestis HOM05D002844 ORTHO05D010627 9.9e-12 77.0 269 26.4
AagrBONN_evm.TU.Sc2ySwM_368.287 Anthoceros agrestis HOM05D002844 ORTHO05D003298 9.9e-12 77.0 246 26.0
AagrBONN_evm.TU.Sc2ySwM_368.290 Anthoceros agrestis HOM05D002844 ORTHO05D003298 9.9e-12 77.0 439 23.2
Eucgr.F00625 Eucalyptus grandis HOM05D003532 ORTHO05D003298 9.9e-12 77.0 412 21.8
Thhalv10012444m.g Eutrema salsugineum HOM05D003532 ORTHO05D003298 9.9e-12 77.0 340 24.1
CANSAT11G0309 Cannabis sativa HOM05D003532 ORTHO05D003298 1.3e-11 76.6 335 25.1
ClCG09G021030 Citrullus lanatus HOM05D003532 ORTHO05D003298 1.7e-11 76.3 470 22.8
SHI26496 Sapria himalayana HOM05D003532 ORTHO05D003298 1.7e-11 76.3 489 21.3
AagrBONN_evm.TU.Sc2ySwM_340.455 Anthoceros agrestis HOM05D002844 ORTHO05D003298 2.2e-11 75.9 306 26.8
AagrBONN_evm.TU.Sc2ySwM_362.2132 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.2e-11 75.9 348 23.6
Sed0014342 Sechium edule HOM05D003532 ORTHO05D003298 3.8e-11 75.1 418 23.0
CiPaw.11G200200 Carya illinoinensis HOM05D003532 ORTHO05D003298 4.9e-11 74.7 478 22.0
PGR083G2272 Punica granatum HOM05D003532 ORTHO05D003298 4.9e-11 74.7 477 22.0
A10p12730 Brassica napus HOM05D003532 ORTHO05D003298 6.4e-11 74.3 346 24.6
BraA10t43365Z Brassica rapa HOM05D003532 ORTHO05D003298 6.4e-11 74.3 346 24.6
Cc05_g14600 Coffea canephora HOM05D003532 ORTHO05D003298 6.4e-11 74.3 339 24.2
vmacro11564 Vaccinium macrocarpon HOM05D003532 ORTHO05D003298 6.4e-11 74.3 336 24.4
FAN16G2517 Fragaria x ananassa HOM05D003532 ORTHO05D003298 8.4e-11 73.9 364 22.5
VMungo0540G1592 Vigna mungo HOM05D003532 ORTHO05D003298 1.1e-10 73.6 322 24.2
EL10Ac4g07623 Beta vulgaris HOM05D003532 ORTHO05D003298 1.4e-10 73.2 331 21.5
AagrBONN_evm.TU.Sc2ySwM_344.5368 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.9e-10 72.8 439 23.2
Sopen03g031830 Solanum pennellii HOM05D003532 ORTHO05D003298 2.4e-10 72.4 347 23.9
AT5G55540 Arabidopsis thaliana HOM05D003532 ORTHO05D003298 3.2e-10 72.0 342 24.0
BcaB08g35909 Brassica carinata HOM05D003532 ORTHO05D003298 3.2e-10 72.0 368 24.2
Oeu019616.1 Olea europaea HOM05D003532 ORTHO05D003298 3.2e-10 72.0 487 21.4
CSS0034495 Camellia sinensis var. sinensis HOM05D003532 ORTHO05D003298 4.2e-10 71.6 469 21.5
CBR_g17875 Chara braunii HOM05D000004 ORTHO05D000002 4.2e-10 71.6 185 31.9
Mapoly0182s0017 Marchantia polymorpha HOM05D003532 ORTHO05D003298 4.2e-10 71.6 437 23.1
AagrBONN_evm.TU.Sc2ySwM_228.5546 Anthoceros agrestis HOM05D002844 ORTHO05D003298 5.5e-10 71.2 239 25.1
AagrBONN_evm.TU.Sc2ySwM_362.1906 Anthoceros agrestis HOM05D003532 ORTHO05D003298 5.5e-10 71.2 388 23.2
AUR62015941 Chenopodium quinoa HOM05D003532 ORTHO05D003298 5.5e-10 71.2 322 23.9
AagrBONN_evm.TU.Sc2ySwM_340.449 Anthoceros agrestis HOM05D002844 ORTHO05D003298 7.1e-10 70.9 314 24.2
Lj1P884T43 Lonicera japonica HOM05D003532 ORTHO05D003298 7.1e-10 70.9 220 25.5
GSVIVG01037769001 Vitis vinifera HOM05D003532 ORTHO05D003298 7.1e-10 70.9 320 21.6
AagrBONN_evm.TU.Sc2ySwM_362.1156 Anthoceros agrestis HOM05D003532 ORTHO05D003298 9.3e-10 70.5 174 28.2
Mapoly0093s0015 Marchantia polymorpha HOM05D003532 ORTHO05D022906 9.3e-10 70.5 162 30.2
AagrBONN_evm.TU.Sc2ySwM_228.5542 Anthoceros agrestis HOM05D002844 ORTHO05D010627 1.2e-09 70.1 432 21.3
C09p46210 Brassica napus HOM05D003532 ORTHO05D003298 1.2e-09 70.1 285 24.6
BolC9t57486H Brassica oleracea HOM05D003532 ORTHO05D003298 1.2e-09 70.1 285 24.6
Rhsim06G0226300 Rhododendron simsii HOM05D003532 ORTHO05D003298 1.2e-09 70.1 336 24.4
CBR_g6469 Chara braunii HOM05D001238 ORTHO05D000938 1.6e-09 69.7 185 31.9
AL8G31090 Arabidopsis lyrata HOM05D003532 ORTHO05D003298 2.7e-09 68.9 472 22.5
Cpa.g.sc12.201 Carica papaya HOM05D003532 ORTHO05D003298 3.5e-09 68.6 421 23.8
CBR_g51915 Chara braunii HOM05D000004 ORTHO05D000002 3.5e-09 68.6 185 31.4
AagrBONN_evm.TU.Sc2ySwM_368.330 Anthoceros agrestis HOM05D002844 ORTHO05D003298 4.6e-09 68.2 450 22.9
AagrBONN_evm.TU.Sc2ySwM_340.576 Anthoceros agrestis HOM05D002844 ORTHO05D003298 6.0e-09 67.8 268 25.0
AagrBONN_evm.TU.Sc2ySwM_368.274 Anthoceros agrestis HOM05D003532 ORTHO05D003298 6.0e-09 67.8 388 23.2
CBR_g31443 Chara braunii HOM05D000004 ORTHO05D000002 6.0e-09 67.8 185 31.4
MELO3C024898.2 Cucumis melo HOM05D003532 ORTHO05D003298 6.0e-09 67.8 470 22.8
Peaxi162Scf00568g00016 Petunia axillaris HOM05D003532 ORTHO05D003298 6.0e-09 67.8 288 23.3
AagrBONN_evm.TU.Sc2ySwM_340.445 Anthoceros agrestis HOM05D002844 ORTHO05D010627 7.9e-09 67.4 246 26.4
SalBow8G1007 Salvia bowleyana HOM05D003532 ORTHO05D003298 7.9e-09 67.4 325 22.8
AagrBONN_evm.TU.Sc2ySwM_362.2176 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.0e-08 67.0 389 22.4
Mapoly0225s0001 Marchantia polymorpha HOM05D003532 ORTHO05D022906 1.3e-08 66.6 157 31.2
Aa31LG3G11480 Aethionema arabicum HOM05D003532 ORTHO05D003298 1.8e-08 66.2 318 20.4
CAN.G1166.12 Capsicum annuum HOM05D003532 ORTHO05D003298 2.3e-08 65.9 476 20.0
Pp3c10_20720 Physcomitrium patens HOM05D003532 ORTHO05D003298 2.3e-08 65.9 381 21.8
Rhsim06G0226200 Rhododendron simsii HOM05D003532 ORTHO05D003298 2.3e-08 65.9 465 21.3
AagrBONN_evm.TU.Sc2ySwM_362.1938 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.0e-08 65.5 247 25.9
AagrBONN_evm.TU.Sc2ySwM_368.273 Anthoceros agrestis HOM05D002844 ORTHO05D003298 3.9e-08 65.1 251 24.7
DCAR_016632 Daucus carota HOM05D003532 ORTHO05D003298 5.1e-08 64.7 388 22.7
AagrBONN_evm.TU.Sc2ySwM_362.995 Anthoceros agrestis HOM05D003532 ORTHO05D003298 8.7e-08 63.9 175 25.7
CBR_g41272 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-08 63.9 192 29.7
CBR_g6442 Chara braunii HOM05D000004 ORTHO05D000002 1.3e-06 60.1 190 29.5
AagrBONN_evm.TU.Sc2ySwM_117.4062 Anthoceros agrestis HOM05D003532 ORTHO05D015853 1.6e-06 59.7 132 34.8
CBR_g48617 Chara braunii HOM05D000004 ORTHO05D000002 2.1e-06 59.3 152 33.6
Mapoly0225s0002 Marchantia polymorpha HOM05D003532 ORTHO05D022906 2.8e-06 58.9 177 29.4
Mapoly0068s0033 Marchantia polymorpha HOM05D003532 ORTHO05D003298 4.8e-06 58.2 136 27.2
AagrBONN_evm.TU.Sc2ySwM_362.458 Anthoceros agrestis HOM05D002844 ORTHO05D010627 6.2e-06 57.8 199 28.1
CBR_g50714 Chara braunii HOM05D000004 ORTHO05D000002 6.2e-06 57.8 136 35.3


User provided reference genes

Program Settings