Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 0.0e+00 1730.3 885 100.0
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 8.4e-163 578.6 905 42.3
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 4.2e-162 576.2 612 51.5
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 5.5e-162 575.9 620 51.5
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 1.6e-161 574.3 827 42.2
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 4.6e-161 572.8 610 50.7
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 3.0e-160 570.1 628 50.0
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 5.1e-160 569.3 613 51.1
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 5.1e-160 569.3 626 49.2
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 6.7e-160 568.9 613 50.9
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 4.3e-159 566.2 609 51.4
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 7.4e-159 565.5 609 50.6
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 1.3e-158 564.7 609 50.7
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 4.8e-158 562.8 609 51.6
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 2.4e-157 560.5 628 48.6
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 3.1e-157 560.1 610 51.1
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 3.1e-157 560.1 610 51.1
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 3.1e-157 560.1 634 48.6
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 5.3e-157 559.3 610 49.7
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 9.0e-157 558.5 609 49.6
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 9.0e-157 558.5 613 51.1
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 1.2e-156 558.1 609 50.9
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 1.2e-156 558.1 614 49.8
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 2.0e-156 557.4 609 49.8
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 2.0e-156 557.4 613 49.9
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 2.0e-156 557.4 614 51.3
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 7.6e-156 555.4 625 49.9
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 1.0e-155 555.1 609 50.2
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 1.3e-155 554.7 633 48.2
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 1.7e-155 554.3 626 49.5
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 2.2e-155 553.9 609 50.9
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 2.9e-155 553.5 613 49.8
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 2.9e-155 553.5 627 48.8
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 6.5e-155 552.4 609 50.4
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 6.5e-155 552.4 614 50.0
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 6.5e-155 552.4 609 50.1
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 8.4e-155 552.0 619 50.1
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 8.4e-155 552.0 633 49.1
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 1.4e-154 551.2 620 48.9
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 1.4e-154 551.2 627 49.3
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 1.9e-154 550.8 609 49.3
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 4.2e-154 549.7 632 48.1
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 1.2e-153 548.1 611 49.9
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 1.2e-153 548.1 620 49.0
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 1.6e-153 547.7 609 50.4
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 1.6e-153 547.7 628 49.0
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 2.7e-153 547.0 611 50.1
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 2.7e-153 547.0 629 48.3
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 3.5e-153 546.6 631 49.1
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 4.6e-153 546.2 614 49.7
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 6.1e-153 545.8 642 48.3
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 6.1e-153 545.8 610 49.5
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 7.9e-153 545.4 618 47.7
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 1.0e-152 545.0 609 49.6
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 2.3e-152 543.9 824 41.3
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 2.3e-152 543.9 638 49.1
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 2.3e-152 543.9 609 49.8
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 3.9e-152 543.1 617 50.1
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 3.9e-152 543.1 610 50.7
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 5.1e-152 542.7 624 48.6
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 2.5e-151 540.4 619 48.6
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 7.4e-151 538.9 609 49.1
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 9.7e-151 538.5 609 49.9
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 2.2e-150 537.3 612 48.9
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 2.8e-150 537.0 610 49.7
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 3.7e-150 536.6 610 49.3
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 2.4e-149 533.9 630 48.6
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 6.9e-149 532.3 634 47.5
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 3.4e-148 530.0 624 47.6
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 3.4e-148 530.0 628 47.9
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 4.5e-148 529.6 616 48.1
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 5.9e-148 529.3 648 46.9
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 7.7e-148 528.9 617 48.0
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 1.3e-147 528.1 612 49.8
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 2.9e-147 526.9 594 49.5
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 6.5e-147 525.8 611 48.1
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 5.5e-146 522.7 609 46.8
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 4.6e-145 519.6 604 49.5
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 2.8e-142 510.4 605 47.3
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 6.9e-141 505.8 649 45.9
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 2.0e-140 504.2 616 48.4
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 2.7e-137 493.8 633 45.7
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 3.3e-135 486.9 650 44.6
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 4.4e-135 486.5 616 46.4
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 2.2e-134 484.2 647 44.5
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 4.1e-133 479.9 711 40.8
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 1.3e-131 474.9 484 52.9
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 1.3e-131 474.9 709 41.2
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 2.5e-130 470.7 651 43.8
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 7.2e-130 469.2 609 45.8
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 2.7e-129 467.2 663 42.4
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 3.6e-129 466.8 654 43.7
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 6.1e-129 466.1 651 43.6
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 2.3e-128 464.2 814 38.1
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 2.4e-125 454.1 634 43.7
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 1.5e-122 444.9 616 42.5
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 8.0e-121 439.1 529 47.1
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 3.7e-118 430.3 554 44.6
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 3.1e-117 427.2 635 42.7
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 4.1e-117 426.8 551 44.8
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 7.7e-116 422.5 537 46.0
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 3.2e-114 417.2 537 45.3
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 5.5e-114 416.4 611 42.2
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 9.4e-114 415.6 622 41.5
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 2.1e-113 414.5 524 46.6
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 4.0e-112 410.2 616 41.4
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 4.0e-112 410.2 624 39.6
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 9.8e-111 405.6 432 51.2
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 8.3e-110 402.5 503 45.7
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 1.7e-102 378.3 548 43.6
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 1.7e-99 368.2 617 38.6
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 3.1e-96 357.5 611 38.8
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 6.6e-91 339.7 658 36.5
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 6.2e-89 333.2 522 41.0
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 2.0e-87 328.2 541 41.8
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 8.3e-86 322.8 699 35.9
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 4.1e-85 320.5 665 35.8
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 1.9e-77 295.0 406 43.1
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 2.3e-75 288.1 429 41.0
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 1.8e-64 251.9 387 40.3
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 2.4e-56 224.9 410 35.6
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 7.4e-50 203.4 248 45.2
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 8.4e-46 189.9 562 29.5
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 2.4e-40 171.8 161 56.5
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.9e-37 162.2 182 48.4
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.3e-33 149.4 266 35.7
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.3e-33 149.4 266 35.7
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 1.5e-31 142.5 107 67.3
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 1.9e-29 135.6 77 79.2
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 1.2e-28 132.9 77 79.2
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 4.6e-28 131.0 77 72.7
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 5.9e-23 114.0 77 64.9
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.9e-21 109.0 116 48.3
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 4.7e-20 104.4 65 73.8
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 1.9e-13 82.4 61 62.3
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 1.8e-11 75.9 61 68.9
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 2.3e-11 75.5 50 64.0
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 9.1e-08 63.5 55 54.5


User provided reference genes

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