Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3510 Chara braunii HOM05D003994 ORTHO05D043992 8.8e-290 999.6 510 100.0
Cre03.g204751 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D043992 1.3e-09 68.9 101 44.6
AT1G68000 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 4.0e-08 63.9 72 50.0
CARHR060640 Cardamine hirsuta HOM05D003994 ORTHO05D004957 1.2e-07 62.4 72 50.0
CiPaw.06G111900 Carya illinoinensis HOM05D003994 ORTHO05D004957 1.5e-07 62.0 71 42.3
BcaB05g24329 Brassica carinata HOM05D003994 ORTHO05D004957 2.6e-07 61.2 72 50.0
Hund16215 Selenicereus undatus HOM05D003994 ORTHO05D004957 2.6e-07 61.2 68 47.1
AL2G26920 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 3.4e-07 60.8 72 48.6
RcHm_v2.0_Chr7g0224781 Rosa chinensis HOM05D003994 ORTHO05D004957 3.4e-07 60.8 78 43.6
BcaB03g15140 Brassica carinata HOM05D003994 ORTHO05D004957 4.4e-07 60.5 72 50.0
BcaB03g15393 Brassica carinata HOM05D003994 ORTHO05D004957 4.4e-07 60.5 72 50.0
BcaC03g14900 Brassica carinata HOM05D003994 ORTHO05D004957 4.4e-07 60.5 72 50.0
BolC2t08504H Brassica oleracea HOM05D003994 ORTHO05D004957 4.4e-07 60.5 72 50.0
Sp5g23020 Schrenkiella parvula HOM05D003994 ORTHO05D004957 4.4e-07 60.5 72 50.0
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 5.8e-07 60.1 71 39.4
C06p37970 Brassica napus HOM05D003994 ORTHO05D004957 7.6e-07 59.7 73 47.9
BolC6t38896H Brassica oleracea HOM05D003994 ORTHO05D004957 7.6e-07 59.7 73 47.9
Carub.0002s1448 Capsella rubella HOM05D003994 ORTHO05D004957 7.6e-07 59.7 72 47.2
Ca_19074_v3 Cicer arietinum L. HOM05D003994 ORTHO05D004957 7.6e-07 59.7 78 43.6
Manes.04G058800 Manihot esculenta HOM05D003994 ORTHO05D004957 7.6e-07 59.7 78 43.6
MSTRG.27636 Avicennia marina HOM05D003994 ORTHO05D004957 9.9e-07 59.3 70 44.3
BcaC08g46004 Brassica carinata HOM05D003994 ORTHO05D004957 9.9e-07 59.3 73 47.9
A07p32200 Brassica napus HOM05D003994 ORTHO05D004957 9.9e-07 59.3 72 48.6
Cfa022653 Carpinus fangiana HOM05D003994 ORTHO05D004957 9.9e-07 59.3 118 34.7
Eucgr.I01421 Eucalyptus grandis HOM05D003994 ORTHO05D004957 9.9e-07 59.3 71 45.1
PGR042G1915 Punica granatum HOM05D003994 ORTHO05D004957 9.9e-07 59.3 71 45.1
CsaV3_2G016120 Cucumis sativus L. HOM05D003994 ORTHO05D004957 1.3e-06 58.9 71 45.1
SGA_v2.0_scaffold16G07672 Striga asiatica HOM05D003994 ORTHO05D004957 1.3e-06 58.9 70 42.9
SGA_v2.0_scaffold3G01602 Striga asiatica HOM05D003994 ORTHO05D004957 1.3e-06 58.9 70 42.9
GSVIVG01024019001 Vitis vinifera HOM05D003994 ORTHO05D004957 1.3e-06 58.9 80 40.0
BcaC01g00237 Brassica carinata HOM05D003994 ORTHO05D004957 1.7e-06 58.5 71 47.9
Thhalv10019092m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 1.7e-06 58.5 72 47.2
Sed0013006 Sechium edule HOM05D003994 ORTHO05D004957 1.7e-06 58.5 71 43.7
TWI79G1032 Tripterygium wilfordii HOM05D003994 ORTHO05D004957 1.7e-06 58.5 77 42.9
Thhalv10026160m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 2.2e-06 58.2 71 47.9
Sp7g37200 Schrenkiella parvula HOM05D003994 ORTHO05D004957 2.2e-06 58.2 71 47.9
THA.LOC104824762 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 2.2e-06 58.2 71 47.9
TPR.G38794 Trifolium pratense HOM05D003994 ORTHO05D004957 2.2e-06 58.2 78 43.6
TPR.G39214 Trifolium pratense HOM05D003994 ORTHO05D004957 2.2e-06 58.2 78 43.6
EL10Ac7g18178 Beta vulgaris HOM05D003994 ORTHO05D004957 2.9e-06 57.8 68 42.6
Cc09_g07710 Coffea canephora HOM05D003994 ORTHO05D004957 2.9e-06 57.8 76 40.8
Psat7g138440 Pisum sativum HOM05D003994 ORTHO05D004957 2.9e-06 57.8 78 43.6
Aa31LG6G16590 Aethionema arabicum HOM05D003994 ORTHO05D004957 3.8e-06 57.4 71 46.5
AUR62040162 Chenopodium quinoa HOM05D003994 ORTHO05D004957 3.8e-06 57.4 68 41.2
Gohir.D01G159750 Gossypium hirsutum HOM05D003994 ORTHO05D004957 3.8e-06 57.4 78 39.7
Medtr4g073020 Medicago truncatula HOM05D003994 ORTHO05D004957 3.8e-06 57.4 73 42.5
Rhsim12G0069500 Rhododendron simsii HOM05D003994 ORTHO05D004957 3.8e-06 57.4 71 39.4
Ah.01g023020 Amaranthus hybridus HOM05D003994 ORTHO05D004957 4.9e-06 57.0 70 41.4
EL10Ac9g21377 Beta vulgaris HOM05D003994 ORTHO05D004957 4.9e-06 57.0 68 42.6
AUR62037910 Chenopodium quinoa HOM05D003994 ORTHO05D004957 4.9e-06 57.0 68 39.7
ECA234G2975 Erigeron canadensis HOM05D003994 ORTHO05D004957 4.9e-06 57.0 77 39.0
FvH4_2g13710 Fragaria vesca HOM05D003994 ORTHO05D004957 4.9e-06 57.0 71 42.3
FAN24G3352 Fragaria x ananassa HOM05D003994 ORTHO05D004957 4.9e-06 57.0 71 42.3
Hma1.2p1_0163F.1_g072490 Hydrangea macrophylla HOM05D003994 ORTHO05D004957 4.9e-06 57.0 71 38.0
Atru.chr5.3321 Acer truncatum HOM05D003994 ORTHO05D004957 6.4e-06 56.6 76 42.1
A08p24160 Brassica napus HOM05D003994 ORTHO05D004957 6.4e-06 56.6 71 45.1
ClCG02G011950 Citrullus lanatus HOM05D003994 ORTHO05D004957 6.4e-06 56.6 96 35.4
DCAR_025322 Daucus carota HOM05D003994 ORTHO05D004957 6.4e-06 56.6 74 35.1
FvH4_2g14000 Fragaria vesca HOM05D003994 ORTHO05D004957 6.4e-06 56.6 78 39.7
FAN15G2236 Fragaria x ananassa HOM05D003994 ORTHO05D004957 6.4e-06 56.6 78 39.7
FAN20G1157 Fragaria x ananassa HOM05D003994 ORTHO05D004957 6.4e-06 56.6 78 39.7
FAN24G0721 Fragaria x ananassa HOM05D003994 ORTHO05D004957 6.4e-06 56.6 78 39.7
FAN27G1606 Fragaria x ananassa HOM05D003994 ORTHO05D004957 6.4e-06 56.6 78 39.7
Gorai.002G198300 Gossypium raimondii HOM05D003994 ORTHO05D004957 6.4e-06 56.6 78 39.7
MD10G1124800 Malus domestica HOM05D003994 ORTHO05D004957 6.4e-06 56.6 71 42.3
Nitab4.5_0001225g0220 Nicotiana tabacum HOM05D003994 ORTHO05D004957 6.4e-06 56.6 73 39.7
Nitab4.5_0001583g0200 Nicotiana tabacum HOM05D003994 ORTHO05D004957 6.4e-06 56.6 73 39.7
QL11p050712 Quercus lobata HOM05D003994 ORTHO05D004957 6.4e-06 56.6 71 39.4
Rhsim05G0056700 Rhododendron simsii HOM05D003994 ORTHO05D004957 6.4e-06 56.6 71 39.4
Sopen08g001960 Solanum pennellii HOM05D003994 ORTHO05D004957 6.4e-06 56.6 70 42.9
PGSC0003DMG401014852 Solanum tuberosum HOM05D003994 ORTHO05D004957 6.4e-06 56.6 70 42.9
CAN.G940.12 Capsicum annuum HOM05D003994 ORTHO05D004957 8.4e-06 56.2 70 41.4
Glyma.11G091200 Glycine max HOM05D003994 ORTHO05D004957 8.4e-06 56.2 78 42.3
PGR142G1861 Punica granatum HOM05D003994 ORTHO05D004957 8.4e-06 56.2 78 41.0
Sed0021478 Sechium edule HOM05D003994 ORTHO05D004957 8.4e-06 56.2 71 42.3
Thecc.02G059800 Theobroma cacao HOM05D003994 ORTHO05D004957 8.4e-06 56.2 78 39.7
Zm00001eb389940 Zea mays HOM05D003994 ORTHO05D004957 8.4e-06 56.2 68 39.7


User provided reference genes

Program Settings