Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g34865 Chara braunii HOM05D003460 ORTHO05D004277 2.5e-270 934.9 486 100.0
CBR_g44444 Chara braunii HOM05D003460 ORTHO05D004277 3.8e-189 665.2 671 60.2
Mapoly0018s0023 Marchantia polymorpha HOM05D003460 ORTHO05D004277 2.8e-19 100.9 673 23.5
AagrBONN_evm.TU.Sc2ySwM_344.2570 Anthoceros agrestis HOM05D003460 ORTHO05D004277 7.2e-15 86.3 90 56.7
MapolyY_A0045 Marchantia polymorpha HOM05D003460 ORTHO05D004277 1.0e-13 82.4 86 59.3
Pp3c8_17600 Physcomitrium patens HOM05D003460 ORTHO05D004277 1.4e-13 82.0 96 53.1
Pp3c24_11620 Physcomitrium patens HOM05D003460 ORTHO05D004277 2.6e-12 77.8 96 50.0
SEGI_03490 Sequoiadendron giganteum HOM05D003460 ORTHO05D004277 3.3e-12 77.4 108 48.1
PSO063G5861 Papaver somniferum HOM05D003460 ORTHO05D004277 4.8e-11 73.6 91 49.5
PSO782G4956 Papaver somniferum HOM05D003460 ORTHO05D004277 4.8e-11 73.6 91 49.5
CDE04G2266 Ceratophyllum demersum HOM05D003460 ORTHO05D004277 6.3e-11 73.2 135 38.5
Zm00001eb404370 Zea mays HOM05D003460 ORTHO05D004277 8.2e-11 72.8 122 42.6
SMO147G0395 Selaginella moellendorffii HOM05D003460 ORTHO05D004277 1.1e-10 72.4 361 24.4
ATR0680G344 Amborella trichopoda HOM05D003460 ORTHO05D004277 1.8e-10 71.6 90 47.8
CDE06G2505 Ceratophyllum demersum HOM05D003460 ORTHO05D004277 3.1e-10 70.9 135 37.8
Cc02_g38020 Coffea canephora HOM05D003460 ORTHO05D004277 2.7e-09 67.8 89 42.7
TAR636G2440 Trochodendron aralioides HOM05D003460 ORTHO05D004277 3.5e-09 67.4 90 45.6
Zm00001eb000520 Zea mays HOM05D003460 ORTHO05D004277 3.5e-09 67.4 122 40.2
Nn6g33423 Nelumbo nucifera HOM05D003460 ORTHO05D004277 4.5e-09 67.0 122 39.3
CSS0010662 Camellia sinensis var. sinensis HOM05D003460 ORTHO05D004277 5.9e-09 66.6 90 45.6
SGA_v2.0_scaffold11G05665 Striga asiatica HOM05D003460 ORTHO05D004277 5.9e-09 66.6 89 41.6
DCAR_008608 Daucus carota HOM05D003460 ORTHO05D004277 7.7e-09 66.2 89 43.8
CANSAT56G1950 Cannabis sativa HOM05D003460 ORTHO05D004277 1.0e-08 65.9 121 38.0
Gohir.A12G108900 Gossypium hirsutum HOM05D003460 ORTHO05D004277 1.0e-08 65.9 90 43.3
Rhsim07G0015100 Rhododendron simsii HOM05D003460 ORTHO05D004277 1.0e-08 65.9 90 44.4
Actinidia10010 Actinidia chinensis HOM05D003460 ORTHO05D004277 1.3e-08 65.5 90 44.4
Migut.N01446 Erythranthe guttata HOM05D003460 ORTHO05D004277 1.3e-08 65.5 89 44.9
Gohir.A11G088900 Gossypium hirsutum HOM05D003460 ORTHO05D004277 1.3e-08 65.5 90 42.2
Atru.chr5.497 Acer truncatum HOM05D003460 ORTHO05D004277 1.7e-08 65.1 120 39.2
Aqoxy7G00308 Aquilegia oxysepala HOM05D003460 ORTHO05D004277 1.7e-08 65.1 91 46.2
MSTRG.17267 Avicennia marina HOM05D003460 ORTHO05D004277 1.7e-08 65.1 94 42.6
ECA240G3092 Erigeron canadensis HOM05D003460 ORTHO05D004277 1.7e-08 65.1 90 44.4
PGR042G0360 Punica granatum HOM05D003460 ORTHO05D004277 1.7e-08 65.1 91 46.2
THA.LOC104801439 Tarenaya hassleriana HOM05D003460 ORTHO05D004277 1.7e-08 65.1 123 35.8
Gohir.D12G111900 Gossypium hirsutum HOM05D003460 ORTHO05D004277 2.2e-08 64.7 90 42.2
Gorai.008G121300 Gossypium raimondii HOM05D003460 ORTHO05D004277 2.2e-08 64.7 90 42.2
RcHm_v2.0_Chr1g0355261 Rosa chinensis HOM05D003460 ORTHO05D004277 2.2e-08 64.7 90 42.2
TAR629G2967 Trochodendron aralioides HOM05D003460 ORTHO05D004277 2.2e-08 64.7 89 42.7
vmacro13290 Vaccinium macrocarpon HOM05D003460 ORTHO05D004277 2.2e-08 64.7 90 43.3
MELO3C006111.2 Cucumis melo HOM05D003460 ORTHO05D004277 2.9e-08 64.3 90 40.0
CsaV3_3G008910 Cucumis sativus L. HOM05D003460 ORTHO05D004277 2.9e-08 64.3 90 40.0
Gohir.D11G093200 Gossypium hirsutum HOM05D003460 ORTHO05D004277 2.9e-08 64.3 90 41.1
Gorai.007G099500 Gossypium raimondii HOM05D003460 ORTHO05D004277 2.9e-08 64.3 90 41.1
Solyc01g094620.3 Solanum lycopersicum HOM05D003460 ORTHO05D004277 2.9e-08 64.3 151 33.8
Dinv43815 Davidia involucrata HOM05D003460 ORTHO05D004277 3.8e-08 63.9 90 42.2
SGA_v2.0_scaffold43G16414 Striga asiatica HOM05D003460 ORTHO05D004277 3.8e-08 63.9 89 41.6
CAN.G78.79 Capsicum annuum HOM05D003460 ORTHO05D004277 5.0e-08 63.5 90 43.3
ClCG05G001530 Citrullus lanatus HOM05D003460 ORTHO05D004277 5.0e-08 63.5 93 39.8
Ciclev10018441m.g Citrus clementina HOM05D003460 ORTHO05D004277 5.0e-08 63.5 122 36.9
Duzib133G1367 Durio zibethinus HOM05D003460 ORTHO05D004277 5.0e-08 63.5 122 36.1
Duzib268G1202 Durio zibethinus HOM05D003460 ORTHO05D004277 5.0e-08 63.5 90 41.1
Manes.01G256801 Manihot esculenta HOM05D003460 ORTHO05D004277 5.0e-08 63.5 120 38.3
SalBow3G0963 Salvia bowleyana HOM05D003460 ORTHO05D004277 5.0e-08 63.5 90 41.1
HanXRQChr03g0093461 Helianthus annuus HOM05D003460 ORTHO05D004277 6.5e-08 63.2 89 44.9
Manes.05G034300 Manihot esculenta HOM05D003460 ORTHO05D004277 6.5e-08 63.2 121 39.7
Sopen01g038430 Solanum pennellii HOM05D003460 ORTHO05D004277 6.5e-08 63.2 151 33.1
FvH4_7g14270 Fragaria vesca HOM05D003460 ORTHO05D004277 8.5e-08 62.8 90 41.1
FAN01G0910 Fragaria x ananassa HOM05D003460 ORTHO05D004277 8.5e-08 62.8 90 41.1
FAN03G0059 Fragaria x ananassa HOM05D003460 ORTHO05D004277 8.5e-08 62.8 90 41.1
FAN06G0746 Fragaria x ananassa HOM05D003460 ORTHO05D004277 8.5e-08 62.8 90 41.1
FAN10G1682 Fragaria x ananassa HOM05D003460 ORTHO05D004277 8.5e-08 62.8 90 41.1
FAN10G2005 Fragaria x ananassa HOM05D003460 ORTHO05D004277 8.5e-08 62.8 90 41.1
Nn1g01533 Nelumbo nucifera HOM05D003460 ORTHO05D004277 8.5e-08 62.8 90 42.2
Nitab4.5_0000583g0090 Nicotiana tabacum HOM05D003460 ORTHO05D004277 8.5e-08 62.8 90 43.3
Oeu052946.1 Olea europaea HOM05D003460 ORTHO05D004277 8.5e-08 62.8 90 44.4
MD01G1060600 Malus domestica HOM05D003460 ORTHO05D004277 1.1e-07 62.4 90 41.1
Prupe.2G170500 Prunus persica HOM05D003460 ORTHO05D004277 1.1e-07 62.4 90 41.1
Actinidia20904 Actinidia chinensis HOM05D003460 ORTHO05D004277 1.5e-07 62.0 90 41.1
HanXRQChr13g0426551 Helianthus annuus HOM05D003460 ORTHO05D004277 1.5e-07 62.0 90 44.4
Peaxi162Scf00020g00327 Petunia axillaris HOM05D003460 ORTHO05D004277 1.5e-07 62.0 90 43.3
Sed0017726 Sechium edule HOM05D003460 ORTHO05D004277 1.5e-07 62.0 93 39.8
unitig_0.g1263 Utricularia gibba HOM05D003460 ORTHO05D004277 1.5e-07 62.0 90 41.1
CSS0048858 Camellia sinensis var. sinensis HOM05D003460 ORTHO05D004277 1.9e-07 61.6 90 42.2
Dinv32483 Davidia involucrata HOM05D003460 ORTHO05D004277 1.9e-07 61.6 90 40.0
Nitab4.5_0000885g0020 Nicotiana tabacum HOM05D003460 ORTHO05D004277 1.9e-07 61.6 90 42.2
Oeu053747.5 Olea europaea HOM05D003460 ORTHO05D004277 1.9e-07 61.6 119 38.7
THA.LOC104825837 Tarenaya hassleriana HOM05D003460 ORTHO05D004277 1.9e-07 61.6 94 39.4
Lj7C512T7 Lonicera japonica HOM05D003460 ORTHO05D004277 2.5e-07 61.2 90 43.3
Lalb_Chr04g0256941 Lupinus albus HOM05D003460 ORTHO05D004277 2.5e-07 61.2 91 45.1
Phvul.008G142400 Phaseolus vulgaris HOM05D003460 ORTHO05D004277 2.5e-07 61.2 90 40.0
Sabra14G0061300 Salix brachista HOM05D003460 ORTHO05D004277 2.5e-07 61.2 120 36.7
VMungo1383G3436 Vigna mungo HOM05D003460 ORTHO05D004277 2.5e-07 61.2 90 40.0
Lalb_Chr17g0339611 Lupinus albus HOM05D003460 ORTHO05D004277 3.2e-07 60.8 91 44.0
Potri.014G084500 Populus trichocarpa HOM05D003460 ORTHO05D004277 3.2e-07 60.8 120 35.8
unitig_61.g26386 Utricularia gibba HOM05D003460 ORTHO05D004277 3.2e-07 60.8 90 42.2
Glyma.07G070700 Glycine max HOM05D003460 ORTHO05D004277 4.2e-07 60.5 91 41.8
BcaC04g24169 Brassica carinata HOM05D003460 ORTHO05D004277 5.5e-07 60.1 132 34.8
A09p00470 Brassica napus HOM05D003460 ORTHO05D004277 5.5e-07 60.1 126 34.1
C09p00390 Brassica napus HOM05D003460 ORTHO05D004277 5.5e-07 60.1 132 34.8
Migut.O00143 Erythranthe guttata HOM05D003460 ORTHO05D004277 5.5e-07 60.1 90 40.0
Glyma.09G259400 Glycine max HOM05D003460 ORTHO05D004277 5.5e-07 60.1 90 40.0
Glyma.18G232900 Glycine max HOM05D003460 ORTHO05D004277 5.5e-07 60.1 90 40.0
Lj1g0005367 Lotus japonicus HOM05D003460 ORTHO05D004277 5.5e-07 60.1 90 40.0
BolC9t52974H Brassica oleracea HOM05D003460 ORTHO05D004277 7.2e-07 59.7 132 34.8
Ca_07919_v3 Cicer arietinum L. HOM05D003460 ORTHO05D004277 7.2e-07 59.7 125 36.0
Sed0006269 Sechium edule HOM05D003460 ORTHO05D004277 7.2e-07 59.7 90 38.9
BraA09t35713Z Brassica rapa HOM05D003460 ORTHO05D004277 9.4e-07 59.3 132 34.1
MD07G1137100 Malus domestica HOM05D003460 ORTHO05D004277 9.4e-07 59.3 91 39.6
Sabra02G0126900 Salix brachista HOM05D003460 ORTHO05D004277 9.4e-07 59.3 90 41.1
Lsat_1_v5_gn_3_137161 Lactuca sativa HOM05D003460 ORTHO05D004277 1.2e-06 58.9 89 43.8
SHI13447 Sapria himalayana HOM05D003460 ORTHO05D004277 2.1e-06 58.2 90 41.1
BcaB01g02251 Brassica carinata HOM05D003460 ORTHO05D004277 2.7e-06 57.8 130 36.2
CARHR248550 Cardamine hirsuta HOM05D003460 ORTHO05D004277 2.7e-06 57.8 121 38.0
Medtr7g077700 Medicago truncatula HOM05D003460 ORTHO05D004277 2.7e-06 57.8 90 40.0
Sc23g0002910 Simmondsia chinensis HOM05D003460 ORTHO05D004277 2.7e-06 57.8 134 33.6
Aa31LG1G11050 Aethionema arabicum HOM05D003460 ORTHO05D004277 3.6e-06 57.4 86 39.5
Potri.002G159900 Populus trichocarpa HOM05D003460 ORTHO05D004277 3.6e-06 57.4 90 40.0
VMungo0331G1375 Vigna mungo HOM05D003460 ORTHO05D004277 3.6e-06 57.4 127 36.2
AT4G00450 Arabidopsis thaliana HOM05D003460 ORTHO05D004277 4.7e-06 57.0 121 38.0
BcaB01g02164 Brassica carinata HOM05D003460 ORTHO05D004277 4.7e-06 57.0 119 35.3
AUR62022565 Chenopodium quinoa HOM05D003460 ORTHO05D004277 4.7e-06 57.0 123 35.0
Haze_15503 Corylus avellana HOM05D003460 ORTHO05D004277 4.7e-06 57.0 90 40.0
Thhalv10028357m.g Eutrema salsugineum HOM05D003460 ORTHO05D004277 4.7e-06 57.0 121 38.0
Lj3g0003387 Lotus japonicus HOM05D003460 ORTHO05D004277 4.7e-06 57.0 123 34.1
Lalb_Chr10g0096951 Lupinus albus HOM05D003460 ORTHO05D004277 4.7e-06 57.0 91 39.6
Psat3g108400 Pisum sativum HOM05D003460 ORTHO05D004277 4.7e-06 57.0 90 38.9
Sp6g00490 Schrenkiella parvula HOM05D003460 ORTHO05D004277 4.7e-06 57.0 121 38.0
Thecc.01G359000 Theobroma cacao HOM05D003460 ORTHO05D004277 4.7e-06 57.0 90 38.9
TWI59G0279 Tripterygium wilfordii HOM05D003460 ORTHO05D004277 4.7e-06 57.0 90 37.8
BcaC01g06879 Brassica carinata HOM05D003460 ORTHO05D004277 6.1e-06 56.6 124 36.3
C03p39210 Brassica napus HOM05D003460 ORTHO05D004277 6.1e-06 56.6 124 36.3
BolC3t16192H Brassica oleracea HOM05D003460 ORTHO05D004277 6.1e-06 56.6 124 36.3
CiPaw.02G030700 Carya illinoinensis HOM05D003460 ORTHO05D004277 6.1e-06 56.6 86 40.7
TPR.G8692 Trifolium pratense HOM05D003460 ORTHO05D004277 6.1e-06 56.6 91 40.7
GSVIVG01026933001 Vitis vinifera HOM05D003460 ORTHO05D004277 6.1e-06 56.6 128 35.9
Carub.0006s3681 Capsella rubella HOM05D003460 ORTHO05D004277 8.0e-06 56.2 119 35.3
Cfa003927 Carpinus fangiana HOM05D003460 ORTHO05D004277 8.0e-06 56.2 90 38.9
AUR62004357 Chenopodium quinoa HOM05D003460 ORTHO05D004277 8.0e-06 56.2 124 33.9


User provided reference genes

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