Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g34813 Chara braunii HOM05D004744 ORTHO05D005655 2.9e-299 1031.2 542 100.0
Pp3c12_9830 Physcomitrium patens HOM05D004744 ORTHO05D005655 1.1e-61 241.9 372 40.1
Mapoly0033s0067 Marchantia polymorpha HOM05D004744 ORTHO05D005655 2.8e-60 237.3 390 38.2
AagrBONN_evm.TU.Sc2ySwM_117.465 Anthoceros agrestis HOM05D004744 ORTHO05D005655 9.1e-59 232.3 385 37.4
QL02p020429 Quercus lobata HOM05D004744 ORTHO05D005655 5.3e-51 206.5 384 31.8
SMO134G0198 Selaginella moellendorffii HOM05D004744 ORTHO05D005655 4.5e-50 203.4 376 35.6
Cc08_g00230 Coffea canephora HOM05D004744 ORTHO05D005655 7.7e-50 202.6 388 34.3
GSVIVG01035922001 Vitis vinifera HOM05D004744 ORTHO05D005655 5.5e-48 196.4 391 32.7
CDE05G1537 Ceratophyllum demersum HOM05D004744 ORTHO05D005655 4.7e-47 193.4 379 31.7
TAR625G1411 Trochodendron aralioides HOM05D004744 ORTHO05D005655 8.0e-47 192.6 381 33.9
CiPaw.08G008500 Carya illinoinensis HOM05D004744 ORTHO05D005655 1.0e-46 192.2 397 31.0
COL.COLO4_18910 Corchorus olitorius HOM05D004744 ORTHO05D005655 6.7e-46 189.5 382 32.2
CANSAT01G0649 Cannabis sativa HOM05D004744 ORTHO05D005655 1.2e-45 188.7 407 30.5
VMungo0720G0351 Vigna mungo HOM05D004744 ORTHO05D005655 1.2e-45 188.7 412 29.9
Haze_21464 Corylus avellana HOM05D004744 ORTHO05D005655 2.6e-45 187.6 380 31.8
Gohir.D06G101900 Gossypium hirsutum HOM05D004744 ORTHO05D005655 3.3e-45 187.2 396 30.8
Sopen08g011940 Solanum pennellii HOM05D004744 ORTHO05D005655 7.5e-45 186.0 378 30.7
Gorai.010G116900 Gossypium raimondii HOM05D004744 ORTHO05D005655 9.7e-45 185.7 372 31.5
Ca_15759_v3 Cicer arietinum L. HOM05D004744 ORTHO05D005655 1.7e-44 184.9 417 30.0
AUR62015365 Chenopodium quinoa HOM05D004744 ORTHO05D005655 2.2e-44 184.5 404 29.5
Solyc08g041780.3 Solanum lycopersicum HOM05D004744 ORTHO05D005655 2.2e-44 184.5 378 31.0
Ciclev10007726m.g Citrus clementina HOM05D004744 ORTHO05D005655 3.7e-44 183.7 414 29.5
BcaC09g51994 Brassica carinata HOM05D004744 ORTHO05D005655 8.2e-44 182.6 398 32.4
BolC1t00685H Brassica oleracea HOM05D004744 ORTHO05D005655 8.2e-44 182.6 398 32.4
Thecc.09G019800 Theobroma cacao HOM05D004744 ORTHO05D005655 8.2e-44 182.6 396 31.1
Aa31LG2G18030 Aethionema arabicum HOM05D004744 ORTHO05D005655 1.1e-43 182.2 383 31.6
A01p06240 Brassica napus HOM05D004744 ORTHO05D005655 1.1e-43 182.2 398 31.9
CAN.G326.4 Capsicum annuum HOM05D004744 ORTHO05D005655 1.1e-43 182.2 378 30.4
Lj1g0018058 Lotus japonicus HOM05D004744 ORTHO05D005655 1.4e-43 181.8 384 29.9
Actinidia13213 Actinidia chinensis HOM05D004744 ORTHO05D005655 1.8e-43 181.4 391 30.9
ATR0767G197 Amborella trichopoda HOM05D004744 ORTHO05D005655 1.8e-43 181.4 387 31.0
EL10Ac3g06914 Beta vulgaris HOM05D004744 ORTHO05D005655 1.8e-43 181.4 390 31.5
Peaxi162Scf00116g00091 Petunia axillaris HOM05D004744 ORTHO05D005655 1.8e-43 181.4 371 30.5
Psat5g030800 Pisum sativum HOM05D004744 ORTHO05D005655 2.4e-43 181.0 384 30.5
vmacro11211 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 2.4e-43 181.0 396 30.8
AUR62012029 Chenopodium quinoa HOM05D004744 ORTHO05D005655 3.1e-43 180.6 382 30.4
Glyma.02G173300 Glycine max HOM05D004744 ORTHO05D005655 3.1e-43 180.6 387 30.5
Aqoxy7G03541 Aquilegia oxysepala HOM05D004744 ORTHO05D005655 4.1e-43 180.3 382 30.6
vmacro11210 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 5.3e-43 179.9 396 30.6
MD15G1130500 Malus domestica HOM05D004744 ORTHO05D005655 7.0e-43 179.5 399 29.1
PSO063G6514 Papaver somniferum HOM05D004744 ORTHO05D005655 9.1e-43 179.1 380 30.0
Lalb_Chr08g0244261 Lupinus albus HOM05D004744 ORTHO05D005655 1.2e-42 178.7 386 31.1
C01p06880 Brassica napus HOM05D004744 ORTHO05D005655 2.7e-42 177.6 399 31.6
BraA01t00591Z Brassica rapa HOM05D004744 ORTHO05D005655 2.7e-42 177.6 403 31.5
AL7G19840 Arabidopsis lyrata HOM05D004744 ORTHO05D005655 3.5e-42 177.2 384 31.0
THA.LOC104805576 Tarenaya hassleriana HOM05D004744 ORTHO05D005655 3.5e-42 177.2 384 31.2
Glyma.02G001200 Glycine max HOM05D004744 ORTHO05D005655 4.5e-42 176.8 385 30.6
TPR.G3127 Trifolium pratense HOM05D004744 ORTHO05D005655 4.5e-42 176.8 384 31.0
Cpa.g.sc187.24 Carica papaya HOM05D004744 ORTHO05D005655 5.9e-42 176.4 383 29.5
CSS0007985 Camellia sinensis var. sinensis HOM05D004744 ORTHO05D005655 7.7e-42 176.0 404 28.0
Atru.chr7.2497 Acer truncatum HOM05D004744 ORTHO05D005655 1.3e-41 175.3 398 29.6
CARHR239950 Cardamine hirsuta HOM05D004744 ORTHO05D005655 1.3e-41 175.3 384 30.2
Sp7g29850 Schrenkiella parvula HOM05D004744 ORTHO05D005655 1.3e-41 175.3 387 31.8
BcaNung03134 Brassica carinata HOM05D004744 ORTHO05D005655 2.2e-41 174.5 401 30.9
Rhsim02G0205700 Rhododendron simsii HOM05D004744 ORTHO05D005655 2.9e-41 174.1 407 30.5
Potri.018G022800 Populus trichocarpa HOM05D004744 ORTHO05D005655 3.8e-41 173.7 399 29.3
Medtr3g106410 Medicago truncatula HOM05D004744 ORTHO05D005655 5.0e-41 173.3 394 29.9
Carub.0007s0850 Capsella rubella HOM05D004744 ORTHO05D005655 8.5e-41 172.6 384 29.9
FAN24G2392 Fragaria x ananassa HOM05D004744 ORTHO05D005655 8.5e-41 172.6 389 30.1
Phvul.007G279700 Phaseolus vulgaris HOM05D004744 ORTHO05D005655 1.5e-40 171.8 421 28.3
Thhalv10024640m.g Eutrema salsugineum HOM05D004744 ORTHO05D005655 1.9e-40 171.4 395 30.6
FvH4_2g28330 Fragaria vesca HOM05D004744 ORTHO05D005655 2.5e-40 171.0 387 28.7
Sed0024238 Sechium edule HOM05D004744 ORTHO05D005655 2.5e-40 171.0 398 27.1
TWI32G0623 Tripterygium wilfordii HOM05D004744 ORTHO05D005655 2.5e-40 171.0 400 30.0
arahy.Tifrunner.gnm1.ann1.8I84Z2 Arachis hypogaea HOM05D004744 ORTHO05D005655 3.2e-40 170.6 421 28.7
Sabra18G0025200 Salix brachista HOM05D004744 ORTHO05D005655 3.2e-40 170.6 399 29.1
FAN20G1207 Fragaria x ananassa HOM05D004744 ORTHO05D005655 1.2e-39 168.7 389 28.8
Nitab4.5_0002992g0040 Nicotiana tabacum HOM05D004744 ORTHO05D005655 1.2e-39 168.7 378 30.2
AT4G32050 Arabidopsis thaliana HOM05D004744 ORTHO05D005655 2.1e-39 167.9 384 29.9
FAN27G1080 Fragaria x ananassa HOM05D004744 ORTHO05D005655 6.1e-39 166.4 389 29.0
PGR142G3966 Punica granatum HOM05D004744 ORTHO05D005655 6.1e-39 166.4 400 29.2
CsaV3_4G036900 Cucumis sativus L. HOM05D004744 ORTHO05D005655 8.0e-39 166.0 398 27.4
ClCG05G016620 Citrullus lanatus HOM05D004744 ORTHO05D005655 1.8e-38 164.9 385 27.3
arahy.Tifrunner.gnm1.ann1.LGG0U4 Arachis hypogaea HOM05D004744 ORTHO05D005655 4.0e-38 163.7 420 28.3
MELO3C016990.2 Cucumis melo HOM05D004744 ORTHO05D005655 4.0e-38 163.7 398 26.6
HanXRQChr01g0030631 Helianthus annuus HOM05D004744 ORTHO05D005655 4.0e-38 163.7 385 29.4
Lsat_1_v5_gn_1_43821 Lactuca sativa HOM05D004744 ORTHO05D005655 5.2e-38 163.3 389 28.5
ECA248G1191 Erigeron canadensis HOM05D004744 ORTHO05D005655 7.5e-37 159.5 385 29.9
Oeu033353.1 Olea europaea HOM05D004744 ORTHO05D005655 7.5e-37 159.5 404 27.5
CAN.G435.2 Capsicum annuum HOM05D004744 ORTHO05D005655 1.3e-36 158.7 378 28.3
Migut.A00009 Erythranthe guttata HOM05D004744 ORTHO05D005655 1.7e-36 158.3 381 28.3
MSTRG.11596 Avicennia marina HOM05D004744 ORTHO05D005655 2.8e-36 157.5 402 28.6
RcHm_v2.0_Chr6g0297241 Rosa chinensis HOM05D004744 ORTHO05D005655 8.3e-36 156.0 397 28.7
DCAR_000582 Daucus carota HOM05D004744 ORTHO05D005655 7.0e-35 152.9 401 28.2
SGA_v2.0_scaffold64G21986 Striga asiatica HOM05D004744 ORTHO05D005655 9.1e-35 152.5 393 26.7
Hund06750 Selenicereus undatus HOM05D004744 ORTHO05D005655 2.7e-34 151.0 435 28.5
Lj1g0024423 Lotus japonicus HOM05D004744 ORTHO05D005655 1.3e-33 148.7 298 31.2
Os02g0798700 Oryza sativa ssp. japonica HOM05D004744 ORTHO05D005655 1.5e-32 145.2 377 28.4
HPP92_003269 Vanilla planifolia HOM05D004744 ORTHO05D005655 1.5e-32 145.2 401 27.9
BcaC06g30946 Brassica carinata HOM05D004744 ORTHO05D005655 1.2e-31 142.1 366 28.7
Cfa013106 Carpinus fangiana HOM05D004744 ORTHO05D005655 4.9e-28 130.2 324 28.1
RcHm_v2.0_Chr2g0139901 Rosa chinensis HOM05D004744 ORTHO05D005655 1.4e-27 128.6 396 26.5
unitig_0.g2772 Utricularia gibba HOM05D004744 ORTHO05D005655 1.4e-27 128.6 384 27.3
TPR.G18367 Trifolium pratense HOM05D004744 ORTHO05D005655 3.1e-27 127.5 392 26.8
Lj8C731T12 Lonicera japonica HOM05D004744 ORTHO05D005655 2.0e-26 124.8 303 26.4
Nitab4.5_0005958g0020 Nicotiana tabacum HOM05D004744 ORTHO05D005655 1.1e-24 119.0 250 27.6
Prupe.1G485900 Prunus persica HOM05D004744 ORTHO05D005655 2.8e-23 114.4 333 24.3
Manes.03G012200 Manihot esculenta HOM05D004744 ORTHO05D005655 1.5e-21 108.6 319 26.6
Eucgr.C01702 Eucalyptus grandis HOM05D004744 ORTHO05D005655 6.4e-20 103.2 293 27.0
Ah.14g079380 Amaranthus hybridus HOM05D004744 ORTHO05D005655 1.0e-17 95.9 151 32.5
Dinv18156 Davidia involucrata HOM05D004744 ORTHO05D005655 8.6e-17 92.8 272 26.5
Cre07.g323650 Chlamydomonas reinhardtii HOM05D004744 ORTHO05D005655 4.7e-15 87.0 181 33.7
TPR.G21279 Trifolium pratense HOM05D004744 ORTHO05D005655 1.4e-14 85.5 164 31.7
Sc20g0001320 Simmondsia chinensis HOM05D004744 ORTHO05D005655 6.8e-14 83.2 265 25.3
Gohir.A06G099700 Gossypium hirsutum HOM05D004744 ORTHO05D005655 2.2e-12 78.2 226 25.7
Nn8g39704 Nelumbo nucifera HOM05D004744 ORTHO05D005655 5.4e-11 73.6 209 29.2
SHI18506 Sapria himalayana HOM05D004744 ORTHO05D005655 1.2e-10 72.4 60 53.3
BolC8t47068H Brassica oleracea HOM05D004744 ORTHO05D005655 1.0e-09 69.3 152 29.6
MCO12G231 Micromonas commoda HOM05D004744 ORTHO05D005655 6.6e-09 66.6 171 31.0
C08p49950 Brassica napus HOM05D004744 ORTHO05D005655 2.5e-08 64.7 147 29.3
Eucgr.L02780 Eucalyptus grandis HOM05D004744 ORTHO05D005655 3.3e-08 64.3 59 50.8
Zm00001eb257970 Zea mays HOM05D004744 ORTHO05D005655 2.1e-07 61.6 205 26.3
SEGI_40333 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 3.6e-07 60.8 107 33.6
Eucgr.C01625 Eucalyptus grandis HOM05D004744 ORTHO05D005655 4.7e-07 60.5 144 29.9
FAN14G1088 Fragaria x ananassa HOM05D004744 ORTHO05D005655 5.2e-06 57.0 124 24.2


User provided reference genes

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