Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 5.7e-225 784.6 402 100.0
CBR_g63036 Chara braunii HOM05D019033 ORTHO05D007783 4.3e-79 300.1 182 84.1
CBR_g45751 Chara braunii HOM05D019033 ORTHO05D007783 2.8e-78 297.4 182 81.3
CBR_g20304 Chara braunii HOM05D019033 ORTHO05D007783 4.7e-78 296.6 182 81.9
CBR_g5684 Chara braunii HOM05D019033 ORTHO05D002258 3.4e-76 290.4 182 80.2
CBR_g4890 Chara braunii HOM05D019033 ORTHO05D007783 2.4e-74 284.3 182 78.0
CBR_g29267 Chara braunii HOM05D000409 ORTHO05D000184 2.0e-68 264.6 168 78.0
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.5e-60 238.4 214 61.2
CBR_g48413 Chara braunii HOM05D000409 ORTHO05D000184 1.4e-58 231.9 151 76.8
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 7.8e-57 226.1 212 60.4
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 7.3e-55 219.5 189 64.0
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 7.3e-55 219.5 232 55.2
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 6.2e-54 216.5 208 61.1
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 1.1e-53 215.7 201 59.7
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.8e-53 214.9 218 58.3
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 2.4e-53 214.5 198 61.1
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 2.4e-53 214.5 214 57.0
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 4.0e-53 213.8 188 62.2
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.0e-53 213.8 224 56.7
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 4.0e-53 213.8 209 59.3
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 4.0e-53 213.8 209 59.3
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 6.9e-53 213.0 209 59.3
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 9.0e-53 212.6 199 60.8
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 9.0e-53 212.6 202 59.9
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 1.2e-52 212.2 192 62.5
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 2.0e-52 211.5 200 58.5
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.0e-52 211.5 198 62.1
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 2.6e-52 211.1 191 60.7
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 2.6e-52 211.1 193 60.6
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 2.6e-52 211.1 242 51.7
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 3.4e-52 210.7 193 60.6
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 4.5e-52 210.3 199 60.8
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 5.8e-52 209.9 187 59.9
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 5.8e-52 209.9 198 59.1
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 5.8e-52 209.9 208 59.1
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 5.8e-52 209.9 190 63.2
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 7.6e-52 209.5 187 61.0
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 7.6e-52 209.5 198 60.6
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 7.6e-52 209.5 208 59.1
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 9.9e-52 209.1 188 61.7
CBR_g79807 Chara braunii HOM05D019033 ORTHO05D007783 9.9e-52 209.1 119 84.0
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 9.9e-52 209.1 209 57.9
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 9.9e-52 209.1 223 53.8
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 1.3e-51 208.8 187 60.4
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 1.7e-51 208.4 218 57.3
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 2.9e-51 207.6 201 58.7
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.9e-51 207.6 216 55.6
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 3.8e-51 207.2 187 59.4
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 3.8e-51 207.2 187 59.4
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 3.8e-51 207.2 208 59.1
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 3.8e-51 207.2 190 62.6
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 3.8e-51 207.2 219 56.2
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 6.4e-51 206.5 187 59.4
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 6.4e-51 206.5 221 55.2
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 8.4e-51 206.1 198 60.1
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 8.4e-51 206.1 194 58.2
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.4e-50 205.3 187 58.8
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.4e-50 205.3 207 58.0
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.9e-50 204.9 220 53.6
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.9e-50 204.9 220 53.6
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.9e-50 204.9 224 54.9
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 4.2e-50 203.8 219 53.9
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 9.3e-50 202.6 249 49.8
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 2.1e-49 201.4 199 56.8
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.1e-49 201.4 210 55.2
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 2.7e-49 201.1 204 55.4
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 3.5e-49 200.7 231 53.7
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 3.5e-49 200.7 197 58.4
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 4.6e-49 200.3 195 58.5
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 7.9e-49 199.5 188 60.1
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.0e-48 199.1 204 59.3
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 1.3e-48 198.7 199 55.8
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.3e-48 198.7 188 60.1
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 2.3e-48 198.0 200 57.5
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 2.3e-48 198.0 202 54.5
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.0e-48 197.6 198 56.6
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.0e-48 197.6 198 56.6
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 5.1e-48 196.8 213 54.5
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 6.7e-48 196.4 249 48.6
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 1.5e-47 195.3 214 53.7
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.5e-47 195.3 230 52.2
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 1.5e-47 195.3 214 54.2
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.5e-47 195.3 244 48.0
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.9e-47 194.9 226 53.5
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.9e-47 194.9 206 55.3
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.5e-47 194.5 225 51.6
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 3.3e-47 194.1 220 51.8
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 3.3e-47 194.1 213 53.5
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 7.4e-47 193.0 211 53.1
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 7.4e-47 193.0 217 51.2
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 9.6e-47 192.6 217 52.5
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 9.6e-47 192.6 230 52.6
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.3e-46 192.2 203 54.2
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 1.6e-46 191.8 163 63.2
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 6.2e-46 189.9 156 64.7
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 2.4e-45 188.0 222 53.2
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 4.0e-45 187.2 207 51.2
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.2e-44 185.7 211 51.7
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.2e-44 185.7 239 48.5
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 1.2e-44 185.7 221 51.1
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.0e-44 184.9 232 46.6
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 2.6e-44 184.5 150 66.0
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.1e-42 179.1 219 49.8
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.1e-42 179.1 248 46.4
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 6.7e-40 169.9 129 67.4
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 4.3e-39 167.2 224 46.9
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 3.1e-37 161.0 214 47.7
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 2.0e-36 158.3 163 55.8
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.2e-35 154.8 123 65.9
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 8.4e-35 152.9 123 63.4
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 1.4e-34 152.1 335 34.9
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.3e-30 139.0 134 61.2
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.0e-27 129.4 87 74.7
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 3.8e-27 127.5 132 55.3
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.8e-24 118.6 82 73.2
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 6.7e-24 116.7 100 61.0
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 4.1e-21 107.5 78 69.2
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 1.6e-17 95.5 156 41.7
CBR_g54986 Chara braunii HOM05D019033 ORTHO05D132211 2.1e-17 95.1 49 89.8
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.7e-17 94.7 130 46.2
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.3e-16 91.7 130 46.2
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 2.0e-15 88.6 120 43.3
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.3e-14 85.9 136 42.6
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 6.7e-08 63.5 86 52.3
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 3.7e-06 57.8 84 50.0
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 6.3e-06 57.0 99 39.4


User provided reference genes

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