Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 2.7e-214 748.4 389 100.0
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 7.7e-76 288.5 283 57.2
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.7e-70 270.8 270 55.6
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 3.4e-68 263.1 288 51.7
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.6e-65 254.2 300 47.0
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 1.4e-64 251.1 253 53.8
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 3.9e-64 249.6 278 49.3
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 2.6e-63 246.9 265 49.8
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 4.4e-63 246.1 253 52.6
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 7.4e-63 245.4 265 49.4
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 7.4e-63 245.4 283 46.6
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 9.7e-63 245.0 265 49.4
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 2.8e-62 243.4 253 52.2
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 4.8e-62 242.7 275 48.4
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 6.3e-62 242.3 253 49.4
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 6.3e-62 242.3 280 47.9
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 6.3e-62 242.3 253 50.6
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.4e-61 241.1 261 51.3
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.4e-61 241.1 280 48.6
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.4e-61 241.1 280 48.6
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 1.4e-61 241.1 276 48.2
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.4e-61 241.1 276 48.2
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.8e-61 240.7 280 48.6
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 1.8e-61 240.7 253 50.2
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.8e-61 240.7 253 50.6
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 2.4e-61 240.4 260 50.8
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 3.1e-61 240.0 286 46.5
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 4.1e-61 239.6 261 51.0
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 4.1e-61 239.6 253 50.6
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 5.3e-61 239.2 328 43.3
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 9.1e-61 238.4 283 46.6
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 9.1e-61 238.4 276 47.1
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.2e-60 238.0 258 48.8
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 2.0e-60 237.3 274 47.4
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 2.0e-60 237.3 260 48.5
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 2.6e-60 236.9 269 49.4
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.6e-60 236.9 269 48.7
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 3.5e-60 236.5 277 47.7
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 4.5e-60 236.1 283 46.3
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 4.5e-60 236.1 254 49.6
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 4.5e-60 236.1 264 49.6
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 4.5e-60 236.1 268 48.5
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 4.5e-60 236.1 283 47.0
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 7.7e-60 235.3 253 49.8
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 1.3e-59 234.6 291 45.0
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.3e-59 234.6 252 48.8
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.7e-59 234.2 286 44.1
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.7e-59 234.2 253 49.0
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.9e-59 233.4 250 50.4
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 3.8e-59 233.0 292 45.2
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 5.0e-59 232.6 251 51.0
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 8.5e-59 231.9 254 49.6
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 8.5e-59 231.9 275 45.5
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 8.5e-59 231.9 253 50.2
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 8.5e-59 231.9 253 48.2
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.9e-58 230.7 253 49.0
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 2.5e-58 230.3 274 47.4
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 3.2e-58 229.9 261 48.7
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 3.2e-58 229.9 251 49.4
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 5.5e-58 229.2 253 49.0
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 7.2e-58 228.8 260 48.5
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.2e-57 228.0 300 46.0
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 2.1e-57 227.3 262 47.3
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.1e-57 227.3 278 45.0
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.7e-57 226.9 275 45.5
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.6e-57 226.5 253 50.2
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 4.7e-57 226.1 253 49.0
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 4.7e-57 226.1 253 48.6
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 6.1e-57 225.7 253 50.2
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.0e-56 224.9 251 48.6
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 1.0e-56 224.9 253 47.8
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 2.3e-56 223.8 252 47.6
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 2.3e-56 223.8 276 44.9
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 3.0e-56 223.4 274 47.8
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.0e-56 223.4 282 46.1
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 3.0e-56 223.4 261 47.5
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 3.0e-56 223.4 277 45.8
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 4.0e-56 223.0 270 47.8
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 4.0e-56 223.0 256 48.0
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 6.7e-56 222.2 261 46.0
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 8.8e-56 221.9 257 46.7
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 2.0e-55 220.7 293 44.4
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 3.3e-55 219.9 305 41.6
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 4.4e-55 219.5 295 43.4
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 5.7e-55 219.2 237 49.8
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 9.7e-55 218.4 289 42.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.7e-54 217.6 252 48.8
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.7e-54 216.5 255 47.1
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.4e-53 214.5 250 48.4
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 2.4e-53 213.8 259 45.9
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 4.1e-53 213.0 309 42.4
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 5.3e-53 212.6 260 45.4
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 5.3e-53 212.6 301 42.5
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 1.6e-52 211.1 295 42.4
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.6e-52 211.1 237 46.8
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.6e-52 211.1 239 47.3
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.3e-51 208.0 286 42.0
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.5e-50 203.8 254 45.7
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 9.4e-50 201.8 217 49.3
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.6e-49 201.1 250 49.6
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.6e-49 199.9 222 50.0
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.8e-48 197.6 222 49.1
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.6e-47 193.7 224 45.5
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 4.4e-47 193.0 188 55.3
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.7e-46 191.0 280 42.1
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.1e-45 186.8 212 50.0
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 3.5e-44 183.3 217 48.4
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 2.2e-43 180.6 247 41.7
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 2.7e-41 173.7 199 48.7
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.0e-40 171.8 210 44.8
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 2.9e-30 137.1 166 48.8
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 7.3e-26 122.5 247 34.4
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.7e-25 119.8 95 61.1
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 7.5e-23 112.5 253 33.2
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.2e-17 95.1 130 40.0
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 2.7e-12 77.4 125 40.0


User provided reference genes

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