Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g33995 Chara braunii HOM05D006128 ORTHO05D007466 0.0e+00 1204.1 816 100.0
Pp3c13_5550 Physcomitrium patens HOM05D006128 ORTHO05D007466 1.3e-16 92.8 288 30.9
AagrBONN_evm.TU.Sc2ySwM_228.1223 Anthoceros agrestis HOM05D006128 ORTHO05D007466 1.2e-14 86.3 272 31.2
Mapoly0184s0013 Marchantia polymorpha HOM05D006128 ORTHO05D007466 7.3e-12 77.0 294 28.6
FvH4_5g39570 Fragaria vesca HOM05D006128 ORTHO05D007466 4.9e-08 64.3 292 27.7
ATR0706G106 Amborella trichopoda HOM05D006128 ORTHO05D007466 6.4e-08 63.9 260 28.8
Nitab4.5_0000116g0090 Nicotiana tabacum HOM05D006128 ORTHO05D007466 6.4e-08 63.9 262 29.0
AT2G25920 Arabidopsis thaliana HOM05D006128 ORTHO05D007466 1.1e-07 63.2 280 28.2
FAN04G2463 Fragaria x ananassa HOM05D006128 ORTHO05D007466 1.1e-07 63.2 292 27.7
AL4G17994 Arabidopsis lyrata HOM05D006128 ORTHO05D007466 1.9e-07 62.4 262 27.5
Zm00001eb345660 Zea mays HOM05D006128 ORTHO05D007466 1.9e-07 62.4 125 32.8
Cpa.g.sc18.8 Carica papaya HOM05D006128 ORTHO05D007466 2.4e-07 62.0 275 27.3
Haze_05012 Corylus avellana HOM05D006128 ORTHO05D007466 3.2e-07 61.6 276 26.8
Phvul.007G216000 Phaseolus vulgaris HOM05D006128 ORTHO05D007466 3.2e-07 61.6 286 25.9
VMungo0720G2147 Vigna mungo HOM05D006128 ORTHO05D007466 3.2e-07 61.6 286 26.6
Ca_10299_v3 Cicer arietinum L. HOM05D006128 ORTHO05D007466 7.1e-07 60.5 285 26.0
Cc08_g11810 Coffea canephora HOM05D006128 ORTHO05D007466 7.1e-07 60.5 278 28.1
MD11G1317000 Malus domestica HOM05D006128 ORTHO05D007466 7.1e-07 60.5 283 26.9
CSS0018421 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 9.3e-07 60.1 260 26.5
CSS0035054 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 9.3e-07 60.1 260 26.5
Gohir.D12G130000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 9.3e-07 60.1 279 26.9
SEGI_18845 Sequoiadendron giganteum HOM05D006128 ORTHO05D007466 9.3e-07 60.1 51 60.8
Cfa005831 Carpinus fangiana HOM05D006128 ORTHO05D007466 1.2e-06 59.7 276 26.4
Glyma.02G014100 Glycine max HOM05D006128 ORTHO05D007466 1.2e-06 59.7 269 27.9
EL10As5g23499 Beta vulgaris HOM05D006128 ORTHO05D007466 1.6e-06 59.3 301 26.2
FAN08G0466 Fragaria x ananassa HOM05D006128 ORTHO05D007466 1.6e-06 59.3 292 27.1
Manes.05G001900 Manihot esculenta HOM05D006128 ORTHO05D007466 1.6e-06 59.3 269 26.4
Psat6g163320 Pisum sativum HOM05D006128 ORTHO05D007466 1.6e-06 59.3 295 26.1
TPR.G19756 Trifolium pratense HOM05D006128 ORTHO05D007466 1.6e-06 59.3 287 26.5
MD03G1297200 Malus domestica HOM05D006128 ORTHO05D007466 2.1e-06 58.9 274 27.0
Peaxi162Scf00001g00252 Petunia axillaris HOM05D006128 ORTHO05D007466 2.1e-06 58.9 261 28.0
Solyc01g079640.4 Solanum lycopersicum HOM05D006128 ORTHO05D007466 2.1e-06 58.9 254 26.8
Sopen01g031420 Solanum pennellii HOM05D006128 ORTHO05D007466 2.1e-06 58.9 254 26.8
Lj5g0013562 Lotus japonicus HOM05D006128 ORTHO05D007466 2.7e-06 58.5 274 26.3
Medtr1g087500 Medicago truncatula HOM05D006128 ORTHO05D007466 2.7e-06 58.5 287 26.8
Potri.002G198400 Populus trichocarpa HOM05D006128 ORTHO05D007466 3.5e-06 58.2 288 27.8
Hund09615 Selenicereus undatus HOM05D006128 ORTHO05D007466 3.5e-06 58.2 275 26.2
Aqoxy2G02213 Aquilegia oxysepala HOM05D006128 ORTHO05D007466 4.6e-06 57.8 112 35.7
Gohir.D08G051000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 4.6e-06 57.8 262 27.1
MBI19_g22894_MAGBIO Magnolia biondii HOM05D006128 ORTHO05D007466 4.6e-06 57.8 123 35.0
Sed0005948 Sechium edule HOM05D006128 ORTHO05D007466 4.6e-06 57.8 268 27.2
Gorai.008G141200 Gossypium raimondii HOM05D006128 ORTHO05D007466 6.0e-06 57.4 267 26.6
Nitab4.5_0000906g0110 Nicotiana tabacum HOM05D006128 ORTHO05D007466 6.0e-06 57.4 280 26.8
Prupe.8G269800 Prunus persica HOM05D006128 ORTHO05D007466 6.0e-06 57.4 275 27.3
PGSC0003DMG400009003 Solanum tuberosum HOM05D006128 ORTHO05D007466 6.0e-06 57.4 254 26.4
TWI36G0171 Tripterygium wilfordii HOM05D006128 ORTHO05D007466 6.0e-06 57.4 266 26.3
DCAR_002874 Daucus carota HOM05D006128 ORTHO05D007466 7.9e-06 57.0 284 26.4
FAN13G2048 Fragaria x ananassa HOM05D006128 ORTHO05D007466 7.9e-06 57.0 292 27.1
FAN18G2733 Fragaria x ananassa HOM05D006128 ORTHO05D007466 7.9e-06 57.0 274 27.4


User provided reference genes

Program Settings