Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 5.4e-127 457.6 222 100.0
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 5.0e-48 195.3 221 48.9
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 2.7e-41 172.9 220 44.1
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 8.6e-40 167.9 218 41.7
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 1.9e-39 166.8 220 43.2
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 2.5e-39 166.4 221 40.7
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 8.1e-38 161.4 222 41.0
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 1.1e-37 161.0 220 39.1
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 1.8e-37 160.2 217 39.2
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 1.8e-37 160.2 224 40.6
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 2.3e-37 159.8 221 40.3
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.3e-37 159.8 221 40.3
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 4.0e-37 159.1 215 40.5
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 4.0e-37 159.1 220 39.5
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 1.5e-36 157.1 224 39.7
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 2.0e-36 156.8 224 38.8
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 2.0e-36 156.8 222 37.8
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 2.0e-36 156.8 218 39.4
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 2.6e-36 156.4 216 40.3
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.6e-36 156.4 217 40.1
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 2.6e-36 156.4 196 41.3
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 2.6e-36 156.4 197 41.1
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 4.4e-36 155.6 216 39.4
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 5.8e-36 155.2 218 39.0
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 7.5e-36 154.8 199 41.2
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 7.5e-36 154.8 218 39.0
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 7.5e-36 154.8 216 39.8
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 7.5e-36 154.8 220 38.2
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 7.5e-36 154.8 220 38.6
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 7.5e-36 154.8 221 39.8
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 1.3e-35 154.1 216 39.4
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 1.7e-35 153.7 221 39.4
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 2.2e-35 153.3 222 39.2
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 2.9e-35 152.9 216 38.9
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 2.9e-35 152.9 201 40.8
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 3.7e-35 152.5 218 39.4
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 6.4e-35 151.8 218 39.4
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 6.4e-35 151.8 218 39.4
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 8.3e-35 151.4 220 39.1
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 8.3e-35 151.4 218 38.5
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 8.3e-35 151.4 217 39.2
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 1.1e-34 151.0 224 37.5
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 1.1e-34 151.0 221 38.5
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 1.4e-34 150.6 218 38.5
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.9e-34 150.2 239 37.2
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 2.4e-34 149.8 223 36.8
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 3.2e-34 149.4 221 36.2
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 3.2e-34 149.4 226 36.3
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 5.4e-34 148.7 216 39.4
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 7.1e-34 148.3 218 39.0
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 9.2e-34 147.9 224 36.6
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 1.2e-33 147.5 220 38.6
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 1.2e-33 147.5 218 38.1
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 1.2e-33 147.5 216 39.8
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.2e-33 147.5 216 38.9
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 1.2e-33 147.5 215 39.1
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 1.6e-33 147.1 217 36.4
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 2.7e-33 146.4 193 41.5
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 2.7e-33 146.4 200 43.5
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 2.7e-33 146.4 216 36.6
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 4.6e-33 145.6 217 39.6
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 6.0e-33 145.2 220 38.2
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 6.0e-33 145.2 222 36.9
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 7.8e-33 144.8 216 37.0
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 7.8e-33 144.8 214 39.3
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 7.8e-33 144.8 214 39.3
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 7.8e-33 144.8 223 35.9
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 1.0e-32 144.4 193 40.9
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 1.0e-32 144.4 193 40.9
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 1.3e-32 144.1 217 38.7
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 1.7e-32 143.7 216 38.4
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 2.3e-32 143.3 222 36.0
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 2.3e-32 143.3 217 37.8
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 3.9e-32 142.5 216 38.0
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 5.1e-32 142.1 216 37.0
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 6.6e-32 141.7 222 37.4
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 8.6e-32 141.4 214 38.3
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 1.1e-31 141.0 195 37.4
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 1.1e-31 141.0 186 41.4
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 1.1e-31 141.0 192 38.0
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 1.5e-31 140.6 227 37.0
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.9e-31 140.2 215 36.3
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 1.2e-30 137.5 216 37.0
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 2.1e-30 136.7 214 36.9
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 8.1e-30 134.8 182 41.2
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.4e-29 134.0 182 41.2
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 2.3e-29 133.3 191 39.8
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 2.3e-29 133.3 214 36.9
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 6.8e-29 131.7 217 35.5
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 4.4e-28 129.0 223 37.7
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 2.2e-27 126.7 224 37.1
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 4.9e-27 125.6 210 35.7
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 9.2e-26 121.3 170 39.4
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 3.0e-24 116.3 180 36.7
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 5.1e-24 115.5 179 36.3
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 6.6e-24 115.2 98 50.0
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 1.9e-23 113.6 252 36.5
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 7.3e-23 111.7 240 31.7
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 7.3e-23 111.7 168 35.1
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 6.2e-22 108.6 221 32.6
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.9e-18 97.1 168 33.9
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 1.6e-17 94.0 214 30.4
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 6.0e-17 92.0 71 56.3
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 1.3e-16 90.9 72 48.6
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 4.3e-15 85.9 217 29.5
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 9.6e-15 84.7 156 34.6
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 9.6e-15 84.7 156 34.6
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 4.8e-14 82.4 163 35.6
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 6.2e-14 82.0 152 34.2
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 1.1e-13 81.3 224 27.7
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 6.4e-11 72.0 197 30.5
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 8.7e-08 61.6 176 27.8


User provided reference genes

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