Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3311 Chara braunii HOM05D004727 ORTHO05D005788 3.1e-187 658.3 327 100.0
CBR_g3313 Chara braunii HOM05D004727 ORTHO05D005788 3.1e-187 658.3 327 100.0
SEGI_23205 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 2.6e-69 266.5 232 53.4
Glyma.09G131600 Glycine max HOM05D004727 ORTHO05D005788 6.5e-68 261.9 231 52.8
SMO351G0007 Selaginella moellendorffii HOM05D004727 ORTHO05D005788 2.5e-67 260.0 254 49.6
Pp3c10_5500 Physcomitrium patens HOM05D004727 ORTHO05D005788 3.2e-67 259.6 233 53.2
CDE11G0547 Ceratophyllum demersum HOM05D004727 ORTHO05D005788 4.2e-67 259.2 251 49.8
PSO782G5178 Papaver somniferum HOM05D004727 ORTHO05D005788 4.2e-67 259.2 232 53.0
PSO478G4818 Papaver somniferum HOM05D004727 ORTHO05D005788 1.2e-66 257.7 232 52.2
VMungo0464G1912 Vigna mungo HOM05D004727 ORTHO05D005788 1.6e-66 257.3 231 52.4
EL10Ac3g05418 Beta vulgaris HOM05D004727 ORTHO05D005788 2.7e-66 256.5 252 48.0
Phvul.004G107900 Phaseolus vulgaris HOM05D004727 ORTHO05D005788 7.9e-66 255.0 235 50.6
HPP92_025470 Vanilla planifolia HOM05D004727 ORTHO05D005788 1.0e-65 254.6 241 48.5
Mapoly0062s0028 Marchantia polymorpha HOM05D004727 ORTHO05D005788 1.8e-65 253.8 245 48.2
Glyma.16G178900 Glycine max HOM05D004727 ORTHO05D005788 3.0e-65 253.1 231 51.1
TPR.G33517 Trifolium pratense HOM05D004727 ORTHO05D005788 1.5e-64 250.8 231 51.9
VMungo0464G2071 Vigna mungo HOM05D004727 ORTHO05D005788 1.9e-64 250.4 276 44.9
Aa31sc163G30 Aethionema arabicum HOM05D004727 ORTHO05D005788 2.5e-64 250.0 233 51.1
ATR0661G169 Amborella trichopoda HOM05D004727 ORTHO05D005788 2.5e-64 250.0 233 51.5
AL7G27320 Arabidopsis lyrata HOM05D004727 ORTHO05D005788 2.5e-64 250.0 253 48.6
A01p16970 Brassica napus HOM05D004727 ORTHO05D005788 3.3e-64 249.6 249 49.0
Carub.0007s1524 Capsella rubella HOM05D004727 ORTHO05D005788 3.3e-64 249.6 253 48.2
CSS0032352 Camellia sinensis var. sinensis HOM05D004727 ORTHO05D005788 4.3e-64 249.2 233 50.2
Sp7g23750 Schrenkiella parvula HOM05D004727 ORTHO05D005788 4.3e-64 249.2 237 50.2
BolC1t02052H Brassica oleracea HOM05D004727 ORTHO05D005788 7.4e-64 248.4 253 47.8
Aqoxy7G00234 Aquilegia oxysepala HOM05D004727 ORTHO05D005788 9.6e-64 248.1 233 50.2
Ah.06g181400 Amaranthus hybridus HOM05D004727 ORTHO05D005788 1.3e-63 247.7 235 49.4
MSTRG.8711 Avicennia marina HOM05D004727 ORTHO05D005788 1.3e-63 247.7 242 48.3
BraA01t01653Z Brassica rapa HOM05D004727 ORTHO05D005788 1.6e-63 247.3 249 48.6
Phvul.004G108600 Phaseolus vulgaris HOM05D004727 ORTHO05D005788 1.6e-63 247.3 275 44.7
C01p21250 Brassica napus HOM05D004727 ORTHO05D005788 2.1e-63 246.9 250 49.2
CARHR233170 Cardamine hirsuta HOM05D004727 ORTHO05D005788 2.1e-63 246.9 233 50.2
COL.COLO4_30213 Corchorus olitorius HOM05D004727 ORTHO05D005788 2.1e-63 246.9 233 49.4
Ca_23692_v3 Cicer arietinum L. HOM05D004727 ORTHO05D005788 2.8e-63 246.5 228 51.3
Duzib205G1763 Durio zibethinus HOM05D004727 ORTHO05D005788 2.8e-63 246.5 233 49.8
Thhalv10025771m.g Eutrema salsugineum HOM05D004727 ORTHO05D005788 2.8e-63 246.5 233 49.8
Gohir.D11G011600 Gossypium hirsutum HOM05D004727 ORTHO05D005788 2.8e-63 246.5 233 50.2
Gorai.007G013000 Gossypium raimondii HOM05D004727 ORTHO05D005788 2.8e-63 246.5 233 50.2
Lalb_Chr03g0034881 Lupinus albus HOM05D004727 ORTHO05D005788 4.8e-63 245.7 229 50.7
Psat0ss29864g0280 Pisum sativum HOM05D004727 ORTHO05D005788 6.2e-63 245.4 231 50.6
Prupe.2G301200 Prunus persica HOM05D004727 ORTHO05D005788 8.2e-63 245.0 233 50.2
CBR_g727 Chara braunii HOM05D004727 ORTHO05D005788 1.1e-62 244.6 287 47.0
PGR042G1629 Punica granatum HOM05D004727 ORTHO05D005788 1.4e-62 244.2 235 49.8
MD01G1208600 Malus domestica HOM05D004727 ORTHO05D005788 2.4e-62 243.4 235 49.8
Potri.004G073700 Populus trichocarpa HOM05D004727 ORTHO05D005788 3.1e-62 243.0 242 48.3
FAN03G1377 Fragaria x ananassa HOM05D004727 ORTHO05D005788 4.0e-62 242.7 233 50.2
FAN10G1092 Fragaria x ananassa HOM05D004727 ORTHO05D005788 4.0e-62 242.7 233 50.2
FAN10G3700 Fragaria x ananassa HOM05D004727 ORTHO05D005788 4.0e-62 242.7 233 50.2
Lj2g0018940 Lotus japonicus HOM05D004727 ORTHO05D005788 4.0e-62 242.7 231 49.8
Solyc03g007900.3 Solanum lycopersicum HOM05D004727 ORTHO05D005788 4.0e-62 242.7 242 50.4
Atru.chr1.354 Acer truncatum HOM05D004727 ORTHO05D005788 5.3e-62 242.3 233 49.4
Medtr0057s0080 Medicago truncatula HOM05D004727 ORTHO05D005788 5.3e-62 242.3 231 50.2
FvH4_7g30250 Fragaria vesca HOM05D004727 ORTHO05D005788 6.9e-62 241.9 233 49.8
HanXRQChr12g0381081 Helianthus annuus HOM05D004727 ORTHO05D005788 6.9e-62 241.9 233 48.5
Sed0015096 Sechium edule HOM05D004727 ORTHO05D005788 6.9e-62 241.9 235 48.5
Hund04788 Selenicereus undatus HOM05D004727 ORTHO05D005788 6.9e-62 241.9 258 46.1
Sopen03g003850 Solanum pennellii HOM05D004727 ORTHO05D005788 6.9e-62 241.9 233 51.1
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 1.2e-61 241.1 249 45.4
Lalb_Chr19g0130641 Lupinus albus HOM05D004727 ORTHO05D005788 1.2e-61 241.1 236 50.4
Glyma.09G131800 Glycine max HOM05D004727 ORTHO05D005788 1.5e-61 240.7 232 49.6
vmacro09814 Vaccinium macrocarpon HOM05D004727 ORTHO05D005788 1.5e-61 240.7 260 47.3
CAN.G126.29 Capsicum annuum HOM05D004727 ORTHO05D005788 2.0e-61 240.4 241 50.2
Migut.F00289 Erythranthe guttata HOM05D004727 ORTHO05D005788 2.0e-61 240.4 242 48.3
ECA232G4896 Erigeron canadensis HOM05D004727 ORTHO05D005788 2.6e-61 240.0 233 48.9
Oeu061663.1 Olea europaea HOM05D004727 ORTHO05D005788 2.6e-61 240.0 233 49.4
CsaV3_3G017470 Cucumis sativus L. HOM05D004727 ORTHO05D005788 3.4e-61 239.6 235 48.1
Eucgr.A02736 Eucalyptus grandis HOM05D004727 ORTHO05D005788 3.4e-61 239.6 235 46.8
Glyma.09G131900 Glycine max HOM05D004727 ORTHO05D005788 3.4e-61 239.6 255 47.5
Gohir.A11G012400 Gossypium hirsutum HOM05D004727 ORTHO05D005788 3.4e-61 239.6 239 48.5
RcHm_v2.0_Chr1g0378381 Rosa chinensis HOM05D004727 ORTHO05D005788 3.4e-61 239.6 233 49.8
Nitab4.5_0000084g0460 Nicotiana tabacum HOM05D004727 ORTHO05D005788 5.8e-61 238.8 254 46.1
Thecc.03G184500 Theobroma cacao HOM05D004727 ORTHO05D005788 5.8e-61 238.8 228 50.0
Manes.06G152500 Manihot esculenta HOM05D004727 ORTHO05D005788 7.6e-61 238.4 242 45.9
Medtr0057s0130 Medicago truncatula HOM05D004727 ORTHO05D005788 7.6e-61 238.4 254 47.6
AUR62031423 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.3e-60 237.7 243 46.9
FAN06G0456 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.3e-60 237.7 245 47.8
FAN06G4134 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.3e-60 237.7 245 47.8
Hund11719 Selenicereus undatus HOM05D004727 ORTHO05D005788 1.7e-60 237.3 243 47.7
unitig_0.g2469 Utricularia gibba HOM05D004727 ORTHO05D005788 1.7e-60 237.3 233 48.1
GSVIVG01028857001 Vitis vinifera HOM05D004727 ORTHO05D005788 2.2e-60 236.9 237 48.1
Actinidia03138 Actinidia chinensis HOM05D004727 ORTHO05D005788 2.9e-60 236.5 224 52.7
Gohir.A08G085600 Gossypium hirsutum HOM05D004727 ORTHO05D005788 2.9e-60 236.5 252 45.6
Cc02_g02360 Coffea canephora HOM05D004727 ORTHO05D005788 3.8e-60 236.1 254 47.6
Lsat_1_v5_gn_9_56621 Lactuca sativa HOM05D004727 ORTHO05D005788 3.8e-60 236.1 233 46.8
Nitab4.5_0008522g0030 Nicotiana tabacum HOM05D004727 ORTHO05D005788 3.8e-60 236.1 254 46.5
unitig_52.g17730 Utricularia gibba HOM05D004727 ORTHO05D005788 6.5e-60 235.3 233 48.5
Sc25g0000700 Simmondsia chinensis HOM05D004727 ORTHO05D005788 1.1e-59 234.6 233 48.1
AUR62021119 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.9e-59 233.8 252 45.6
HanXRQChr05g0130171 Helianthus annuus HOM05D004727 ORTHO05D005788 1.9e-59 233.8 233 46.8
Gohir.D08G109400 Gossypium hirsutum HOM05D004727 ORTHO05D005788 2.5e-59 233.4 232 47.8
Nn1g01641 Nelumbo nucifera HOM05D004727 ORTHO05D005788 2.5e-59 233.4 233 48.1
CAN.G126.24 Capsicum annuum HOM05D004727 ORTHO05D005788 3.2e-59 233.0 253 44.7
Gorai.004G117100 Gossypium raimondii HOM05D004727 ORTHO05D005788 4.2e-59 232.6 232 47.8
Solyc03g007920.4 Solanum lycopersicum HOM05D004727 ORTHO05D005788 5.5e-59 232.3 254 44.1
Peaxi162Scf00444g00244 Petunia axillaris HOM05D004727 ORTHO05D005788 1.6e-58 230.7 263 44.9
PGSC0003DMG400009500 Solanum tuberosum HOM05D004727 ORTHO05D005788 1.6e-58 230.7 253 43.9
Potri.017G146200 Populus trichocarpa HOM05D004727 ORTHO05D005788 2.1e-58 230.3 258 45.0
Haze_00047 Corylus avellana HOM05D004727 ORTHO05D005788 3.5e-58 229.6 281 40.9
Sopen03g003870 Solanum pennellii HOM05D004727 ORTHO05D005788 4.6e-58 229.2 254 43.7
Nitab4.5_0008522g0010 Nicotiana tabacum HOM05D004727 ORTHO05D005788 6.1e-58 228.8 233 48.5
Rhsim09G0200700 Rhododendron simsii HOM05D004727 ORTHO05D005788 2.3e-57 226.9 290 43.1
AT4G25720 Arabidopsis thaliana HOM05D004727 ORTHO05D005788 5.1e-57 225.7 215 50.2
Os06g0103700 Oryza sativa ssp. japonica HOM05D004727 ORTHO05D005788 6.7e-57 225.3 260 43.5
HPP92_025401 Vanilla planifolia HOM05D004727 ORTHO05D005788 6.7e-57 225.3 210 50.0
SalBow4G1885 Salvia bowleyana HOM05D004727 ORTHO05D005788 5.7e-56 222.2 291 42.3
ClCG05G008410 Citrullus lanatus HOM05D004727 ORTHO05D005788 2.8e-55 219.9 268 42.2
Cpa.g.sc107.111 Carica papaya HOM05D004727 ORTHO05D005788 3.7e-55 219.5 281 42.7
Sabra04G0048400 Salix brachista HOM05D004727 ORTHO05D005788 6.3e-55 218.8 246 45.9
Duzib068G1006 Durio zibethinus HOM05D004727 ORTHO05D005788 1.4e-54 217.6 216 49.1
Nitab4.5_0000084g0450 Nicotiana tabacum HOM05D004727 ORTHO05D005788 1.8e-54 217.2 282 42.2
CANSAT21G0167 Cannabis sativa HOM05D004727 ORTHO05D005788 4.1e-54 216.1 242 44.6
CANSAT21G2173 Cannabis sativa HOM05D004727 ORTHO05D005788 4.1e-54 216.1 242 44.6
EL10Ac4g07582 Beta vulgaris HOM05D004727 ORTHO05D005788 6.9e-54 215.3 330 37.6
CiPaw.05G262100 Carya illinoinensis HOM05D004727 ORTHO05D005788 6.9e-54 215.3 229 45.4
Manes.06G152600 Manihot esculenta HOM05D004727 ORTHO05D005788 6.9e-54 215.3 228 44.7
SGA_v2.0_scaffold60G21112 Striga asiatica HOM05D004727 ORTHO05D005788 6.9e-54 215.3 244 45.9
Lalb_Chr19g0130651 Lupinus albus HOM05D004727 ORTHO05D005788 4.5e-53 212.6 244 45.1
arahy.Tifrunner.gnm1.ann1.G1I5XM Arachis hypogaea HOM05D004727 ORTHO05D005788 1.7e-52 210.7 228 46.1
Cre11.g476150 Chlamydomonas reinhardtii HOM05D004727 ORTHO05D005788 2.9e-52 209.9 242 43.4
MELO3C006936.2 Cucumis melo HOM05D004727 ORTHO05D005788 8.5e-52 208.4 235 43.0
AUR62036451 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.5e-48 197.6 220 46.4
MCO01G501 Micromonas commoda HOM05D004727 ORTHO05D005788 2.0e-48 197.2 245 42.4
Dinv35254 Davidia involucrata HOM05D004727 ORTHO05D005788 3.3e-48 196.4 189 49.2
PRCOL_00002776 Prasinoderma coloniale HOM05D004727 ORTHO05D005788 1.7e-47 194.1 339 37.2
SMO231G0015 Selaginella moellendorffii HOM05D004727 ORTHO05D005788 3.7e-47 193.0 193 49.7
arahy.Tifrunner.gnm1.ann1.NE53A1 Arachis hypogaea HOM05D004727 ORTHO05D005788 4.8e-47 192.6 210 45.7
MSTRG.27085 Avicennia marina HOM05D004727 ORTHO05D005788 3.1e-46 189.9 195 46.7
AUR62017096 Chenopodium quinoa HOM05D004727 ORTHO05D005788 4.2e-43 179.5 194 46.9
Ciclev10005858m.g Citrus clementina HOM05D004727 ORTHO05D005788 7.2e-43 178.7 167 51.5
Zm00001eb268480 Zea mays HOM05D004727 ORTHO05D005788 2.2e-36 157.1 190 42.1
AagrBONN_evm.TU.Sc2ySwM_344.2696 Anthoceros agrestis HOM05D004727 ORTHO05D005788 3.8e-36 156.4 132 53.8
QL09p012782 Quercus lobata HOM05D004727 ORTHO05D005788 2.5e-35 153.7 132 51.5
FAN03G2629 Fragaria x ananassa HOM05D004727 ORTHO05D005788 6.1e-34 149.1 194 41.2
Peaxi162Scf00444g00021 Petunia axillaris HOM05D004727 ORTHO05D005788 3.0e-33 146.7 213 38.5
Actinidia31840 Actinidia chinensis HOM05D004727 ORTHO05D005788 2.0e-32 144.1 123 56.9
AUR62036407 Chenopodium quinoa HOM05D004727 ORTHO05D005788 8.2e-31 138.7 195 37.9
MBI12_g08716_MAGBIO Magnolia biondii HOM05D004727 ORTHO05D005788 4.1e-30 136.3 175 42.3
Ah.13g069160 Amaranthus hybridus HOM05D004727 ORTHO05D005788 9.1e-30 135.2 158 45.6
DCAR_024607 Daucus carota HOM05D004727 ORTHO05D005788 2.2e-28 130.6 144 45.1
SEGI_30519 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 8.5e-28 128.6 93 61.3
DCAR_008880 Daucus carota HOM05D001628 ORTHO05D001568 3.2e-27 126.7 118 50.0
arahy.Tifrunner.gnm1.ann1.FZN7A9 Arachis hypogaea HOM05D004727 ORTHO05D005788 5.7e-24 115.9 105 48.6
SEGI_06548 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 2.1e-18 97.4 75 57.3
EL10Ac4g07580 Beta vulgaris HOM05D004727 ORTHO05D005788 2.7e-18 97.1 111 41.4
Actinidia31841 Actinidia chinensis HOM05D004727 ORTHO05D005788 1.0e-17 95.1 95 46.3
FAN01G2810 Fragaria x ananassa HOM05D000427 ORTHO05D000386 6.3e-15 85.9 73 54.8
Mapoly1114s0001 Marchantia polymorpha HOM05D004727 ORTHO05D005788 1.4e-14 84.7 74 50.0
QL09p012777 Quercus lobata HOM05D004727 ORTHO05D005788 5.0e-12 76.3 98 42.9
SHI13754 Sapria himalayana HOM05D004727 ORTHO05D005788 8.9e-09 65.5 96 39.6
Ah.13g069170 Amaranthus hybridus HOM05D004727 ORTHO05D005788 2.0e-08 64.3 62 46.8
MD14G1086700 Malus domestica HOM05D004727 ORTHO05D005788 7.5e-08 62.4 49 57.1
Ciclev10006767m.g Citrus clementina HOM05D004727 ORTHO05D005788 1.7e-07 61.2 56 46.4
TWI39G0716 Tripterygium wilfordii HOM05D001943 ORTHO05D001969 1.8e-06 57.8 60 48.3


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