Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 0.0e+00 1161.0 659 100.0
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.1e-50 205.7 241 44.4
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 4.2e-50 203.8 249 43.0
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 4.2e-50 203.8 241 42.3
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 4.2e-50 203.8 254 43.3
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 5.5e-50 203.4 255 42.7
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 9.4e-50 202.6 246 42.7
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 1.6e-49 201.8 241 44.4
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 2.1e-49 201.4 250 43.2
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 2.1e-49 201.4 243 41.6
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 2.7e-49 201.1 269 40.9
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 3.6e-49 200.7 249 43.0
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 3.6e-49 200.7 250 42.8
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 4.6e-49 200.3 250 42.4
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 7.9e-49 199.5 250 42.0
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 7.9e-49 199.5 250 42.8
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 7.9e-49 199.5 241 41.9
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.0e-48 199.1 239 44.8
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 1.0e-48 199.1 250 42.4
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 1.0e-48 199.1 250 41.6
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 1.8e-48 198.4 250 42.8
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 2.3e-48 198.0 250 42.4
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 3.0e-48 197.6 254 42.1
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 3.0e-48 197.6 254 42.1
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 3.0e-48 197.6 250 42.8
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 3.9e-48 197.2 258 41.5
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 3.9e-48 197.2 253 41.9
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 5.1e-48 196.8 253 41.5
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 6.7e-48 196.4 241 41.5
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 6.7e-48 196.4 250 41.6
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 6.7e-48 196.4 252 41.3
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 8.8e-48 196.1 254 41.7
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 8.8e-48 196.1 254 41.7
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 8.8e-48 196.1 254 41.7
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 8.8e-48 196.1 250 41.2
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 8.8e-48 196.1 253 42.7
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 8.8e-48 196.1 250 42.4
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 8.8e-48 196.1 250 40.4
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.1e-47 195.7 249 40.2
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 1.1e-47 195.7 248 41.1
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 1.5e-47 195.3 246 41.9
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 1.5e-47 195.3 253 42.3
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.5e-47 195.3 247 42.1
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.5e-47 195.3 255 41.6
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 2.0e-47 194.9 251 42.6
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 2.0e-47 194.9 258 41.5
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 2.0e-47 194.9 253 41.1
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 2.0e-47 194.9 250 42.0
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 2.0e-47 194.9 252 41.3
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 3.3e-47 194.1 241 41.9
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 3.3e-47 194.1 241 41.5
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 4.3e-47 193.7 250 41.6
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 4.3e-47 193.7 253 41.5
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 4.3e-47 193.7 241 42.3
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 4.3e-47 193.7 249 43.0
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.3e-47 193.7 241 42.7
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 4.3e-47 193.7 249 40.6
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 5.7e-47 193.4 253 41.1
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 5.7e-47 193.4 252 40.9
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 5.7e-47 193.4 250 40.4
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 5.7e-47 193.4 253 41.5
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 5.7e-47 193.4 246 41.5
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 5.7e-47 193.4 253 41.9
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 7.4e-47 193.0 250 40.4
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 7.4e-47 193.0 253 40.7
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 7.4e-47 193.0 250 40.4
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 7.4e-47 193.0 246 41.5
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 9.7e-47 192.6 250 40.4
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 9.7e-47 192.6 250 41.2
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 9.7e-47 192.6 250 41.2
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 9.7e-47 192.6 252 39.7
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 1.7e-46 191.8 250 40.4
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.7e-46 191.8 250 41.2
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 2.8e-46 191.0 250 41.2
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 2.8e-46 191.0 250 40.4
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.8e-46 191.0 249 41.0
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.8e-46 191.0 252 40.1
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 3.7e-46 190.7 251 41.8
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 3.7e-46 190.7 250 40.8
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 3.7e-46 190.7 250 40.8
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 3.7e-46 190.7 241 41.9
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.7e-46 190.7 241 41.1
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.7e-46 190.7 250 40.8
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 4.8e-46 190.3 250 41.2
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 4.8e-46 190.3 252 41.7
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 4.8e-46 190.3 241 41.5
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 4.8e-46 190.3 250 41.6
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.8e-46 190.3 250 40.8
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 4.8e-46 190.3 252 40.1
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 4.8e-46 190.3 250 39.6
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 4.8e-46 190.3 250 41.2
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 6.3e-46 189.9 250 41.2
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 6.3e-46 189.9 250 40.4
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 6.3e-46 189.9 249 42.6
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 8.2e-46 189.5 241 41.1
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 8.2e-46 189.5 253 43.1
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.1e-45 189.1 250 40.8
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.1e-45 189.1 231 42.0
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 1.1e-45 189.1 253 41.1
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.4e-45 188.7 241 41.9
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.4e-45 188.7 250 40.4
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 2.4e-45 188.0 246 40.2
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-44 185.7 247 41.7
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 2.6e-44 184.5 263 39.2
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 3.4e-44 184.1 262 39.7
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.5e-44 183.7 238 42.4
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 7.7e-44 183.0 250 40.0
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.0e-43 182.6 250 40.0
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.1e-42 179.1 241 41.5
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 1.4e-42 178.7 209 43.5
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 1.9e-42 178.3 209 42.6
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 9.4e-42 176.0 275 37.8
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 3.6e-41 174.1 241 39.4
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.0e-39 168.3 241 40.2
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 2.6e-39 167.9 245 38.0
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 3.1e-37 161.0 183 43.2
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.1e-37 160.6 236 39.8
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.0e-36 158.3 273 34.8
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.0e-35 156.0 179 43.0
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.3e-35 155.6 244 35.7
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.2e-30 138.3 185 39.5
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.4e-29 135.6 245 35.9
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 4.1e-29 134.0 136 48.5
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.5e-23 115.5 136 44.1
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.1e-21 107.5 155 36.8
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 4.5e-20 104.0 250 30.8
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.4e-16 92.4 230 31.3
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.7e-14 84.3 252 28.6
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 5.9e-12 77.0 67 53.7
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.0e-11 76.3 95 40.0
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.3e-10 71.2 105 35.2
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 7.3e-10 70.1 64 51.6


User provided reference genes

Program Settings