Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3290 Chara braunii HOM05D012794 ORTHO05D017318 0.0e+00 1796.9 1019 100.0
PRCOL_00003704 Prasinoderma coloniale HOM05D012794 ORTHO05D017318 6.2e-109 399.8 966 32.7
AagrBONN_evm.TU.Sc2ySwM_362.576 Anthoceros agrestis HOM05D012794 ORTHO05D017318 1.1e-102 379.0 387 48.3
Mapoly0055s0096 Marchantia polymorpha HOM05D012794 ORTHO05D017318 2.8e-101 374.4 979 30.0
Cre12.g520950 Chlamydomonas reinhardtii HOM05D012794 ORTHO05D017318 2.1e-93 348.2 1112 30.1
Pp3c16_25560 Physcomitrium patens HOM05D012794 ORTHO05D017318 8.4e-90 336.3 894 29.8
Pp3c16_25571 Physcomitrium patens HOM05D012794 ORTHO05D017318 8.4e-90 336.3 894 29.8
SMO145G0034 Selaginella moellendorffii HOM05D012794 ORTHO05D017318 2.0e-83 315.1 303 48.2
MCO01G077 Micromonas commoda HOM05D012794 ORTHO05D017318 9.3e-65 253.1 363 38.6
MCO15G527 Micromonas commoda HOM05D012794 ORTHO05D028758 1.2e-59 236.1 376 39.6
Cre12.g536550 Chlamydomonas reinhardtii HOM05D012794 ORTHO05D028758 1.9e-57 228.8 356 38.2
CBR_g56035 Chara braunii HOM05D012794 ORTHO05D028758 7.9e-56 223.4 354 34.7
PRCOL_00000101 Prasinoderma coloniale HOM05D012794 ORTHO05D028758 9.7e-54 216.5 363 33.3
CBR_g32153 Chara braunii HOM05D020880 ORTHO05D013717 1.3e-21 109.8 363 24.2
Cre12.g506000 Chlamydomonas reinhardtii HOM05D020880 ORTHO05D013717 3.1e-20 105.1 370 23.0
Cfa024144 Carpinus fangiana HOM05D020880 ORTHO05D013717 1.4e-15 89.7 284 22.9
Mapoly0033s0152 Marchantia polymorpha HOM05D023138 ORTHO05D019631 2.0e-11 75.9 336 21.7
AagrBONN_evm.TU.Sc2ySwM_368.2239 Anthoceros agrestis HOM05D014295 ORTHO05D013717 6.6e-10 70.9 416 21.2
MCO02G345 Micromonas commoda HOM05D023138 ORTHO05D019631 2.1e-08 65.9 263 26.2
Mapoly0014s0208 Marchantia polymorpha HOM05D014295 ORTHO05D013717 1.0e-07 63.5 318 23.3
AagrBONN_evm.TU.Sc2ySwM_368.2163 Anthoceros agrestis HOM05D023138 ORTHO05D019631 1.8e-07 62.8 237 25.3
FvH4_6g51280 Fragaria vesca HOM05D004386 ORTHO05D005247 1.2e-06 60.1 269 23.0
FAN09G3114 Fragaria x ananassa HOM05D004386 ORTHO05D005247 1.2e-06 60.1 269 22.7
FAN02G3912 Fragaria x ananassa HOM05D004386 ORTHO05D005247 1.5e-06 59.7 269 21.2
FAN14G1865 Fragaria x ananassa HOM05D004386 ORTHO05D005247 1.5e-06 59.7 269 22.7
FAN05G0117 Fragaria x ananassa HOM05D004386 ORTHO05D005247 2.0e-06 59.3 269 23.0
CiPaw.03G043200 Carya illinoinensis HOM05D004386 ORTHO05D005247 2.6e-06 58.9 313 21.1
RcHm_v2.0_Chr2g0172901 Rosa chinensis HOM05D004386 ORTHO05D005247 3.4e-06 58.5 269 22.3
SEGI_17834 Sequoiadendron giganteum HOM05D000684 ORTHO05D008211 5.8e-06 57.8 210 27.6
Eucgr.J02238 Eucalyptus grandis HOM05D004386 ORTHO05D005247 7.5e-06 57.4 273 22.3


User provided reference genes

Program Settings