Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3283 Chara braunii HOM05D047067 ORTHO05D002782 7.9e-280 967.2 826 100.0
CBR_g23588 Chara braunii HOM05D047067 ORTHO05D002782 1.4e-135 488.0 441 95.0
Mapoly0114s0040 Marchantia polymorpha HOM05D002646 ORTHO05D002782 7.4e-12 77.0 118 35.6
TWI23G1057 Tripterygium wilfordii HOM05D002646 ORTHO05D002782 7.4e-12 77.0 89 47.2
Aa31LG1G11300 Aethionema arabicum HOM05D002646 ORTHO05D002782 1.4e-10 72.8 92 40.2
Ciclev10020287m.g Citrus clementina HOM05D002646 ORTHO05D002782 1.4e-10 72.8 100 40.0
BraA10t42295Z Brassica rapa HOM05D002646 ORTHO05D002782 3.1e-10 71.6 111 35.1
BcaB03g13627 Brassica carinata HOM05D002646 ORTHO05D002782 5.3e-10 70.9 111 34.2
BcaNung05290 Brassica carinata HOM05D002646 ORTHO05D002782 5.3e-10 70.9 111 35.1
A10p00160 Brassica napus HOM05D002646 ORTHO05D002782 5.3e-10 70.9 111 34.2
C05p00160 Brassica napus HOM05D002646 ORTHO05D002782 5.3e-10 70.9 111 35.1
BolC5t28806H Brassica oleracea HOM05D002646 ORTHO05D002782 5.3e-10 70.9 111 35.1
GSVIVG01027622001 Vitis vinifera HOM05D002646 ORTHO05D002782 5.3e-10 70.9 93 39.8
COL.COLO4_12558 Corchorus olitorius HOM05D002646 ORTHO05D002782 9.1e-10 70.1 93 39.8
Gohir.A08G133800 Gossypium hirsutum HOM05D002646 ORTHO05D002782 9.1e-10 70.1 97 38.1
Sp1g00330 Schrenkiella parvula HOM05D002646 ORTHO05D002782 9.1e-10 70.1 91 38.5
TAR374G0079 Trochodendron aralioides HOM05D002646 ORTHO05D002782 9.1e-10 70.1 95 38.9
Gorai.004G161000 Gossypium raimondii HOM05D002646 ORTHO05D002782 1.6e-09 69.3 97 38.1
MD08G1028000 Malus domestica HOM05D002646 ORTHO05D002782 1.6e-09 69.3 93 40.9
Atru.chr5.320 Acer truncatum HOM05D002646 ORTHO05D002782 2.0e-09 68.9 100 36.0
Gohir.D08G155000 Gossypium hirsutum HOM05D002646 ORTHO05D002782 2.0e-09 68.9 97 37.1
Nn4g26422 Nelumbo nucifera HOM05D002646 ORTHO05D002782 2.0e-09 68.9 95 38.9
AL1G10350 Arabidopsis lyrata HOM05D002646 ORTHO05D002782 2.6e-09 68.6 88 39.8
Thhalv10007755m.g Eutrema salsugineum HOM05D002646 ORTHO05D002782 2.6e-09 68.6 88 39.8
MBI04_g32239_MAGBIO Magnolia biondii HOM05D002646 ORTHO05D002782 2.6e-09 68.6 96 36.5
SEGI_28365 Sequoiadendron giganteum HOM05D002646 ORTHO05D002782 2.6e-09 68.6 112 33.0
AT1G01970 Arabidopsis thaliana HOM05D002646 ORTHO05D002782 4.5e-09 67.8 91 37.4
Aqoxy7G00603 Aquilegia oxysepala HOM05D002646 ORTHO05D002782 5.9e-09 67.4 90 38.9
Duzib268G0058 Durio zibethinus HOM05D002646 ORTHO05D002782 5.9e-09 67.4 93 38.7
Duzib268G0077 Durio zibethinus HOM05D002646 ORTHO05D002782 5.9e-09 67.4 93 38.7
Rhsim08G0118000 Rhododendron simsii HOM05D002646 ORTHO05D002782 5.9e-09 67.4 97 41.2
RhsimUnG0099800 Rhododendron simsii HOM05D002646 ORTHO05D002782 5.9e-09 67.4 97 41.2
vmacro13392 Vaccinium macrocarpon HOM05D002646 ORTHO05D002782 5.9e-09 67.4 90 42.2
RcHm_v2.0_Chr1g0350721 Rosa chinensis HOM05D002646 ORTHO05D002782 7.7e-09 67.0 90 41.1
Thecc.01G375100 Theobroma cacao HOM05D002646 ORTHO05D002782 7.7e-09 67.0 97 36.1
ATR0697G028 Amborella trichopoda HOM05D002646 ORTHO05D002782 1.3e-08 66.2 111 35.1
Eucgr.G00320 Eucalyptus grandis HOM05D002646 ORTHO05D002782 1.3e-08 66.2 91 41.8
Prupe.2G146700 Prunus persica HOM05D002646 ORTHO05D002782 1.7e-08 65.9 93 37.6
Duzib268G1615 Durio zibethinus HOM05D002646 ORTHO05D002782 2.2e-08 65.5 93 36.6
PSO782G0929 Papaver somniferum HOM05D002646 ORTHO05D002782 2.9e-08 65.1 93 38.7
QL12p017558 Quercus lobata HOM05D002646 ORTHO05D002782 2.9e-08 65.1 91 38.5
CiPaw.01G261200 Carya illinoinensis HOM05D002646 ORTHO05D002782 3.8e-08 64.7 88 42.0
arahy.Tifrunner.gnm1.ann1.HKT7FP Arachis hypogaea HOM05D002646 ORTHO05D002782 5.0e-08 64.3 93 40.9
Gohir.A06G009600 Gossypium hirsutum HOM05D002646 ORTHO05D002782 5.0e-08 64.3 110 30.0
Manes.01G265200 Manihot esculenta HOM05D002646 ORTHO05D002782 5.0e-08 64.3 94 38.3
Gohir.D06G005550 Gossypium hirsutum HOM05D002646 ORTHO05D002782 6.5e-08 63.9 110 29.1
Sed0003475 Sechium edule HOM05D002646 ORTHO05D002782 6.5e-08 63.9 93 37.6
THA.LOC104817013 Tarenaya hassleriana HOM05D002646 ORTHO05D002782 6.5e-08 63.9 95 36.8
FAN01G3025 Fragaria x ananassa HOM05D002646 ORTHO05D002782 8.5e-08 63.5 93 38.7
PGR042G3460 Punica granatum HOM05D002646 ORTHO05D002782 8.5e-08 63.5 92 39.1
Sc19g0004610 Simmondsia chinensis HOM05D002646 ORTHO05D002782 8.5e-08 63.5 90 38.9
CDE11G0049 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 1.1e-07 63.2 77 44.2
FvH4_7g12010 Fragaria vesca HOM05D002646 ORTHO05D002782 1.1e-07 63.2 93 38.7
FAN06G4772 Fragaria x ananassa HOM05D002646 ORTHO05D002782 1.1e-07 63.2 93 38.7
FAN10G4284 Fragaria x ananassa HOM05D002646 ORTHO05D002782 1.1e-07 63.2 93 38.7
Hund22797 Selenicereus undatus HOM05D002646 ORTHO05D002782 1.1e-07 63.2 88 39.8
arahy.Tifrunner.gnm1.ann1.7IJL1I Arachis hypogaea HOM05D002646 ORTHO05D002782 1.5e-07 62.8 93 40.9
CARHR000380 Cardamine hirsuta HOM05D002646 ORTHO05D002782 1.5e-07 62.8 95 34.7
Glyma.18G221100 Glycine max HOM05D002646 ORTHO05D002782 1.5e-07 62.8 97 34.0
Gorai.010G009700 Gossypium raimondii HOM05D002646 ORTHO05D002782 1.5e-07 62.8 110 29.1
MSTRG.13432 Avicennia marina HOM05D002646 ORTHO05D002782 1.9e-07 62.4 94 34.0
CSS0036552 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 1.9e-07 62.4 91 38.5
EL10Ac2g03761 Beta vulgaris HOM05D002646 ORTHO05D002782 2.5e-07 62.0 90 38.9
CSS0029682 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 2.5e-07 62.0 91 38.5
AUR62030050 Chenopodium quinoa HOM05D002646 ORTHO05D002782 2.5e-07 62.0 93 39.8
Zm00001eb329950 Zea mays HOM05D002646 ORTHO05D002782 2.5e-07 62.0 92 39.1
FAN10G1248 Fragaria x ananassa HOM05D002646 ORTHO05D002782 3.2e-07 61.6 93 37.6
Os07g0661900 Oryza sativa ssp. japonica HOM05D002646 ORTHO05D002782 3.2e-07 61.6 96 38.5
PSO478G1528 Papaver somniferum HOM05D002646 ORTHO05D002782 3.2e-07 61.6 91 37.4
Pp3c10_14800 Physcomitrium patens HOM05D002646 ORTHO05D002782 3.2e-07 61.6 128 32.8
Pp3c10_14810 Physcomitrium patens HOM05D002646 ORTHO05D002782 3.2e-07 61.6 128 32.8
HanXRQChr04g0122351 Helianthus annuus HOM05D002646 ORTHO05D002782 4.2e-07 61.2 91 37.4
Phvul.008G076800 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 4.2e-07 61.2 93 33.3
AUR62002634 Chenopodium quinoa HOM05D002646 ORTHO05D002782 5.5e-07 60.8 97 37.1
FAN03G1830 Fragaria x ananassa HOM05D002646 ORTHO05D002782 5.5e-07 60.8 93 38.7
CSS0007142 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 7.2e-07 60.5 107 33.6
Cc02_g36600 Coffea canephora HOM05D002646 ORTHO05D002782 9.4e-07 60.1 97 34.0
Glyma.09G268500 Glycine max HOM05D002646 ORTHO05D002782 9.4e-07 60.1 96 32.3
HPP92_001656 Vanilla planifolia HOM05D002646 ORTHO05D002782 9.4e-07 60.1 91 34.1
Actinidia31415 Actinidia chinensis HOM05D002646 ORTHO05D002782 1.2e-06 59.7 97 36.1
CsaV3_3G009620 Cucumis sativus L. HOM05D002646 ORTHO05D002782 1.2e-06 59.7 92 35.9
Phvul.008G083500 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 1.2e-06 59.7 93 34.4
Peaxi162Scf00021g01520 Petunia axillaris HOM05D002646 ORTHO05D002782 1.6e-06 59.3 95 33.7
TPR.G26954 Trifolium pratense HOM05D002646 ORTHO05D002782 1.6e-06 59.3 96 35.4
CANSAT11G0871 Cannabis sativa HOM05D002646 ORTHO05D002782 2.1e-06 58.9 95 33.7
FAN06G0179 Fragaria x ananassa HOM05D002646 ORTHO05D002782 2.1e-06 58.9 85 38.8
Oeu003485.1 Olea europaea HOM05D002646 ORTHO05D002782 2.1e-06 58.9 85 37.6
PGSC0003DMG400012755 Solanum tuberosum HOM05D002646 ORTHO05D002782 2.1e-06 58.9 72 41.7
SGA_v2.0_scaffold201G41411 Striga asiatica HOM05D002646 ORTHO05D002782 2.1e-06 58.9 112 27.7
Ah.13g074290 Amaranthus hybridus HOM05D002646 ORTHO05D002782 2.7e-06 58.5 93 36.6
Dinv29528 Davidia involucrata HOM05D002646 ORTHO05D002782 3.6e-06 58.2 95 35.8
Medtr7g075010 Medicago truncatula HOM05D002646 ORTHO05D002782 3.6e-06 58.2 96 35.4
Solyc01g091450.3 Solanum lycopersicum HOM05D002646 ORTHO05D002782 3.6e-06 58.2 72 41.7
Aa31LG7G4170 Aethionema arabicum HOM05D002646 ORTHO05D002782 4.7e-06 57.8 112 29.5
Ca_07824_v3 Cicer arietinum L. HOM05D002646 ORTHO05D002782 4.7e-06 57.8 88 37.5
ClCG05G002180 Citrullus lanatus HOM05D002646 ORTHO05D002782 4.7e-06 57.8 93 34.4
Rhsim06G0032100 Rhododendron simsii HOM05D002646 ORTHO05D002782 4.7e-06 57.8 108 27.8
Actinidia12264 Actinidia chinensis HOM05D002646 ORTHO05D002782 6.1e-06 57.4 87 37.9
CSS0011651 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 6.1e-06 57.4 109 28.4
CSS0033317 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 6.1e-06 57.4 110 29.1
CSS0043279 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 6.1e-06 57.4 109 28.4
Haze_16825 Corylus avellana HOM05D002646 ORTHO05D002782 6.1e-06 57.4 90 35.6
Duzib041G0261 Durio zibethinus HOM05D002646 ORTHO05D002782 6.1e-06 57.4 110 29.1
Lj9A571T76 Lonicera japonica HOM05D002646 ORTHO05D002782 6.1e-06 57.4 93 34.4
Nitab4.5_0000457g0400 Nicotiana tabacum HOM05D002646 ORTHO05D002782 6.1e-06 57.4 88 37.5
CAN.G388.3 Capsicum annuum HOM05D002646 ORTHO05D002782 8.0e-06 57.0 78 38.5
Lalb_Chr03g0039441 Lupinus albus HOM05D002646 ORTHO05D002782 8.0e-06 57.0 110 32.7


User provided reference genes

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