Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 1.2e-289 999.2 530 100.0
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 6.0e-148 528.5 510 53.9
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 1.5e-135 487.3 513 50.1
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 6.0e-132 475.3 522 48.7
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 1.8e-131 473.8 512 50.0
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 2.3e-131 473.4 478 53.1
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 3.8e-126 456.1 511 48.3
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 4.9e-126 455.7 510 46.7
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 8.4e-126 454.9 511 48.1
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 4.2e-125 452.6 510 45.9
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 7.9e-124 448.4 511 47.0
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 1.3e-123 447.6 511 46.8
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 2.3e-123 446.8 510 46.9
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 6.7e-123 445.3 511 46.4
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 8.7e-123 444.9 511 46.2
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 1.1e-122 444.5 511 46.2
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 1.1e-122 444.5 510 46.7
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 1.9e-122 443.7 510 46.1
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 2.5e-122 443.4 510 46.3
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 2.5e-122 443.4 510 46.1
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 3.3e-122 443.0 510 46.7
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 3.3e-122 443.0 511 46.0
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 4.3e-122 442.6 510 45.9
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 7.4e-122 441.8 522 45.8
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 7.4e-122 441.8 510 46.1
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 7.4e-122 441.8 518 45.9
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 9.6e-122 441.4 511 46.2
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 9.6e-122 441.4 510 46.1
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 1.3e-121 441.0 511 45.8
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 2.8e-121 439.9 511 46.0
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 3.7e-121 439.5 511 46.6
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 6.2e-121 438.7 513 45.4
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 6.2e-121 438.7 510 45.7
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 6.2e-121 438.7 511 46.2
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 8.2e-121 438.3 511 46.6
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 3.1e-120 436.4 510 45.5
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 3.1e-120 436.4 511 45.8
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 5.3e-120 435.6 510 45.5
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 5.3e-120 435.6 510 45.5
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 5.3e-120 435.6 510 46.1
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 9.0e-120 434.9 510 45.5
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 9.0e-120 434.9 510 45.5
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 1.2e-119 434.5 510 45.9
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 1.2e-119 434.5 510 45.9
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 1.2e-119 434.5 511 45.6
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 4.5e-119 432.6 511 45.8
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 1.3e-118 431.0 510 45.5
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 2.2e-118 430.3 512 45.1
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 3.8e-118 429.5 510 44.7
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 3.8e-118 429.5 510 45.5
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 4.9e-118 429.1 522 44.8
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 1.9e-117 427.2 511 45.2
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 1.9e-117 427.2 511 45.6
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 3.2e-117 426.4 510 44.9
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 4.2e-117 426.0 511 45.2
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 4.2e-117 426.0 511 45.4
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 1.2e-116 424.5 495 45.5
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 1.2e-116 424.5 511 44.6
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 1.2e-116 424.5 533 43.7
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 1.6e-116 424.1 522 43.7
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 2.1e-116 423.7 506 44.7
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 2.7e-116 423.3 541 43.6
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 3.5e-116 422.9 521 44.0
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.8e-115 420.6 523 44.4
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 2.3e-115 420.2 512 43.9
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 3.9e-115 419.5 511 44.2
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 3.9e-115 419.5 511 44.2
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 5.1e-115 419.1 510 45.7
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 5.1e-115 419.1 522 44.1
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 5.1e-115 419.1 511 43.2
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 6.7e-115 418.7 549 43.0
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 8.7e-115 418.3 513 44.2
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 8.7e-115 418.3 511 44.4
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 1.1e-114 417.9 511 43.2
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 1.9e-114 417.2 524 43.3
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 1.3e-113 414.5 505 45.0
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 2.2e-113 413.7 519 44.7
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 6.3e-113 412.1 445 49.0
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 6.3e-113 412.1 510 44.9
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 1.4e-112 411.0 522 43.3
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 1.8e-112 410.6 511 43.8
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 2.4e-112 410.2 510 44.9
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 6.9e-112 408.7 510 44.5
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 1.2e-111 407.9 510 44.7
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 3.4e-111 406.4 510 44.7
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 1.0e-110 404.8 513 45.2
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 3.8e-110 402.9 549 41.7
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 2.5e-109 400.2 525 42.7
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 2.5e-109 400.2 624 38.3
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 4.6e-108 396.0 510 42.5
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 3.0e-107 393.3 578 40.7
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 3.3e-106 389.8 482 44.4
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 4.8e-105 386.0 473 44.0
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 4.1e-104 382.9 494 43.3
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 3.6e-100 369.8 438 45.2
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 4.6e-100 369.4 497 42.5
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 2.6e-98 363.6 404 46.5
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 1.5e-95 354.4 502 42.6
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 5.2e-91 339.3 412 44.2
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 1.3e-89 334.7 482 39.4
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 1.4e-88 331.3 412 43.2
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 4.1e-88 329.7 485 41.6
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 5.9e-87 325.9 364 46.4
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 3.3e-82 310.1 359 46.8
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 1.7e-81 307.8 511 35.0
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 2.7e-79 300.4 358 46.1
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 5.0e-78 296.2 501 34.5
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 3.4e-74 283.5 340 46.2
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 4.4e-66 256.5 391 39.4
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 2.7e-63 247.3 259 50.2
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.0e-62 245.4 453 34.7
MD05G1161600 Malus domestica HOM05D004954 ORTHO05D006267 2.4e-56 224.2 456 35.5
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 9.5e-45 185.7 271 40.6
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 4.9e-41 173.3 153 54.9
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 6.4e-41 172.9 363 33.9
FAN15G2507 Fragaria x ananassa HOM05D004954 ORTHO05D006267 2.1e-28 131.3 131 49.6
Sc17g0001690 Simmondsia chinensis HOM05D004954 ORTHO05D006267 1.3e-25 122.1 138 47.8
FAN15G2003 Fragaria x ananassa HOM05D004954 ORTHO05D006267 8.4e-25 119.4 138 46.4
VMungo0647G2582 Vigna mungo HOM05D004954 ORTHO05D006267 9.6e-21 105.9 120 49.2
SEGI_32998 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 3.1e-19 100.9 84 63.1
SEGI_30399 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 2.3e-14 84.7 139 36.0
MD05G1160200 Malus domestica HOM05D004954 ORTHO05D006267 6.7e-14 83.2 93 48.4
Ca_12409_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 7.4e-13 79.7 67 56.7
SEGI_31941 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.7e-09 68.6 39 71.8
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 1.9e-08 65.1 56 53.6
TAR375G0464 Trochodendron aralioides HOM05D004954 ORTHO05D006267 6.0e-07 60.1 43 65.1


User provided reference genes

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