Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g32657 Chara braunii HOM05D004031 ORTHO05D006678 0.0e+00 1124.4 591 100.0
SEGI_16646 Sequoiadendron giganteum HOM05D004031 ORTHO05D006678 1.1e-36 159.1 224 43.3
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 5.8e-35 153.3 511 30.3
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 2.5e-33 147.9 276 38.4
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 9.3e-33 146.0 226 35.8
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.2e-32 145.6 218 37.2
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.2e-32 145.6 218 37.2
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 2.1e-32 144.8 216 43.1
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 4.6e-32 143.7 216 36.6
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 4.6e-32 143.7 228 38.2
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 6.0e-32 143.3 239 38.5
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 6.0e-32 143.3 207 39.1
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 6.0e-32 143.3 266 36.5
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 1.3e-31 142.1 244 37.3
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 3.0e-31 141.0 207 37.2
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 3.0e-31 141.0 230 35.7
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 3.9e-31 140.6 212 37.3
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 1.1e-30 139.0 345 31.6
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 1.5e-30 138.7 215 38.6
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 1.5e-30 138.7 210 38.1
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 1.9e-30 138.3 207 36.7
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 2.5e-30 137.9 207 38.2
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 2.5e-30 137.9 213 39.4
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 5.7e-30 136.7 212 35.4
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 5.7e-30 136.7 238 37.4
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 9.6e-30 136.0 225 36.0
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 1.3e-29 135.6 224 36.2
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 1.3e-29 135.6 233 35.2
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 1.6e-29 135.2 262 32.8
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 2.1e-29 134.8 227 37.4
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 2.1e-29 134.8 224 36.2
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 3.7e-29 134.0 238 34.0
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 3.7e-29 134.0 217 36.9
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 3.7e-29 134.0 233 34.8
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 3.7e-29 134.0 252 32.9
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 4.8e-29 133.7 255 32.9
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 6.3e-29 133.3 212 35.4
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 8.2e-29 132.9 217 36.9
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 1.1e-28 132.5 293 32.4
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 1.4e-28 132.1 512 26.8
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.4e-28 132.1 215 37.7
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 1.8e-28 131.7 207 36.2
Nitab4.5_0000009g0250 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.8e-28 131.7 201 35.8
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 1.8e-28 131.7 207 37.7
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 1.8e-28 131.7 229 34.9
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 3.1e-28 131.0 233 35.6
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 3.1e-28 131.0 207 37.7
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 5.3e-28 130.2 235 36.2
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 5.3e-28 130.2 217 36.9
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 9.0e-28 129.4 207 36.7
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 9.0e-28 129.4 243 33.3
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.2e-27 129.0 293 33.1
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.5e-27 128.6 293 32.1
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 1.5e-27 128.6 219 36.5
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 2.0e-27 128.3 209 36.8
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 2.0e-27 128.3 223 34.1
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 2.6e-27 127.9 207 35.7
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 2.6e-27 127.9 254 34.3
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 2.6e-27 127.9 517 27.7
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 3.4e-27 127.5 236 35.6
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 3.4e-27 127.5 275 33.1
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 3.4e-27 127.5 214 32.7
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 4.5e-27 127.1 207 35.7
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 7.6e-27 126.3 212 34.9
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 7.6e-27 126.3 246 32.9
QL07p024699 Quercus lobata HOM05D004031 ORTHO05D006678 1.0e-26 125.9 244 34.0
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 1.7e-26 125.2 222 35.6
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 2.2e-26 124.8 357 29.1
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 2.2e-26 124.8 207 35.7
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 2.2e-26 124.8 223 31.8
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 2.2e-26 124.8 236 31.8
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 2.9e-26 124.4 207 35.7
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 2.9e-26 124.4 514 28.6
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 5.0e-26 123.6 226 32.7
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 8.5e-26 122.9 270 31.9
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 8.5e-26 122.9 223 32.7
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 1.1e-25 122.5 223 32.7
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 1.4e-25 122.1 223 32.3
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 1.9e-25 121.7 212 35.8
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.9e-25 121.7 263 31.2
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 4.2e-25 120.6 207 32.4
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 7.2e-25 119.8 207 33.8
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 7.2e-25 119.8 207 32.4
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 1.6e-24 118.6 204 35.8
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 2.1e-24 118.2 239 33.1
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 2.7e-24 117.9 226 32.7
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 3.6e-24 117.5 265 30.2
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 3.6e-24 117.5 346 28.6
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 6.1e-24 116.7 235 30.6
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 1.8e-23 115.2 179 39.1
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 2.3e-23 114.8 225 33.3
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 5.1e-23 113.6 208 35.6
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 5.1e-23 113.6 208 35.6
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 5.1e-23 113.6 208 35.6
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.9e-22 111.7 292 28.4
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.5e-22 111.3 292 28.4
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 7.4e-22 109.8 214 32.2
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 7.4e-22 109.8 248 28.2
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.2e-21 108.2 292 28.1
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 3.7e-21 107.5 174 36.2
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 5.3e-20 103.6 227 30.4
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 1.5e-19 102.1 207 32.4
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 1.5e-19 102.1 207 31.9
CSS0030002 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 2.0e-19 101.7 144 38.2
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 3.4e-19 100.9 209 31.1
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 5.9e-19 100.1 282 29.4
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 1.7e-18 98.6 249 28.9
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 4.2e-17 94.0 218 29.4
SHI31751 Sapria himalayana HOM05D004031 ORTHO05D006678 1.2e-16 92.4 283 27.2
CBR_g40590 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-15 88.6 83 59.0
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 1.1e-14 85.9 373 24.4
CBR_g52179 Chara braunii HOM05D005582 ORTHO05D006678 4.4e-14 84.0 156 39.7
CBR_g23427 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-10 71.2 73 57.5
CBR_g21784 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-08 65.5 60 63.3
CBR_g31359 Chara braunii HOM05D008586 ORTHO05D000301 1.8e-07 62.0 64 51.6
CBR_g28631 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-07 61.6 78 47.4
CBR_g51577 Chara braunii HOM05D000019 ORTHO05D000353 2.3e-07 61.6 75 42.7
PRCOL_00003629 Prasinoderma coloniale HOM05D004031 ORTHO05D006678 1.5e-06 58.9 71 40.8


User provided reference genes

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