Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g32188 Chara braunii HOM05D002890 ORTHO05D005855 0.0e+00 5346.6 3302 100.0
Pp3c26_140 Physcomitrium patens HOM05D002890 ORTHO05D005855 7.0e-56 225.3 867 27.7
Eucgr.E04054 Eucalyptus grandis HOM05D002890 ORTHO05D005855 6.8e-51 208.8 841 28.8
TAR381G0565 Trochodendron aralioides HOM05D002890 ORTHO05D005855 2.6e-50 206.8 838 27.9
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 3.4e-50 206.5 838 28.9
ATR0580G054 Amborella trichopoda HOM05D002890 ORTHO05D005855 3.7e-49 203.0 974 28.2
Aqoxy1G00468 Aquilegia oxysepala HOM05D002890 ORTHO05D005855 8.3e-49 201.8 850 26.2
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 3.1e-48 199.9 867 28.6
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 4.1e-48 199.5 867 28.1
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 1.0e-46 194.9 548 30.5
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 2.9e-46 193.4 915 28.0
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 3.8e-46 193.0 890 26.7
CDE05G0302 Ceratophyllum demersum HOM05D002890 ORTHO05D005855 5.0e-46 192.6 637 27.3
Mapoly0029s0108 Marchantia polymorpha HOM05D002890 ORTHO05D005855 5.0e-46 192.6 1261 26.2
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 1.1e-45 191.4 835 29.5
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 1.5e-45 191.0 857 27.5
unitig_749.g13717 Utricularia gibba HOM05D002890 ORTHO05D005855 1.9e-45 190.7 611 29.8
Rhsim06G0075600 Rhododendron simsii HOM05D002890 ORTHO05D005855 3.3e-45 189.9 888 25.6
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 4.2e-45 189.5 870 28.4
PSO017G2731 Papaver somniferum HOM05D002890 ORTHO05D005855 4.2e-45 189.5 1023 25.7
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 5.5e-45 189.1 550 28.7
AagrBONN_evm.TU.Sc2ySwM_228.3189 Anthoceros agrestis HOM05D002890 ORTHO05D005855 7.2e-45 188.7 490 31.6
vmacro21934 Vaccinium macrocarpon HOM05D002890 ORTHO05D005855 7.2e-45 188.7 861 26.0
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 9.5e-45 188.3 858 26.8
CiPaw.10G071100 Carya illinoinensis HOM05D002890 ORTHO05D005855 1.6e-44 187.6 548 29.7
arahy.Tifrunner.gnm1.ann1.3SKL4U Arachis hypogaea HOM05D002890 ORTHO05D005855 4.7e-44 186.0 857 28.5
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 6.1e-44 185.7 1033 27.2
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 6.1e-44 185.7 1031 27.2
Lalb_Chr20g0118631 Lupinus albus HOM05D002890 ORTHO05D005855 8.0e-44 185.3 838 28.9
arahy.Tifrunner.gnm1.ann1.1MU60G Arachis hypogaea HOM05D002890 ORTHO05D005855 1.0e-43 184.9 857 28.5
SEGI_27437 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 1.0e-43 184.9 1021 27.3
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 1.0e-43 184.9 578 27.7
Ca_00660_v3 Cicer arietinum L. HOM05D002890 ORTHO05D005855 1.4e-43 184.5 843 27.4
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 2.3e-43 183.7 1000 27.5
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 5.2e-43 182.6 843 26.1
Sc17g0007380 Simmondsia chinensis HOM05D002890 ORTHO05D005855 5.2e-43 182.6 992 25.7
Potri.011G003500 Populus trichocarpa HOM05D002890 ORTHO05D005855 6.8e-43 182.2 917 27.9
Phvul.006G149850 Phaseolus vulgaris HOM05D002890 ORTHO05D005855 8.9e-43 181.8 619 27.0
Psat3g207880 Pisum sativum HOM05D002890 ORTHO05D005855 1.5e-42 181.0 868 26.0
Hund21410 Selenicereus undatus HOM05D002890 ORTHO05D005855 1.5e-42 181.0 937 24.1
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 2.0e-42 180.6 843 27.8
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 2.6e-42 180.3 844 28.1
TWI38G1729 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 2.6e-42 180.3 832 27.4
Migut.O00260 Erythranthe guttata HOM05D002890 ORTHO05D005855 3.4e-42 179.9 869 26.0
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 3.4e-42 179.9 1000 27.4
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 4.4e-42 179.5 1075 24.7
PSO478G2895 Papaver somniferum HOM05D002890 ORTHO05D005855 9.8e-42 178.3 790 26.8
Sabra11G0001700 Salix brachista HOM05D002890 ORTHO05D005855 9.8e-42 178.3 917 28.5
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 1.3e-41 177.9 1073 24.2
SalBow5G1338 Salvia bowleyana HOM05D002890 ORTHO05D005855 2.2e-41 177.2 859 26.5
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 4.9e-41 176.0 885 25.9
VMungo1309G2953 Vigna mungo HOM05D002890 ORTHO05D005855 4.9e-41 176.0 576 27.1
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 1.4e-40 174.5 874 29.6
Medtr2g023280 Medicago truncatula HOM05D002890 ORTHO05D005855 3.1e-40 173.3 835 26.3
MSTRG.23208 Avicennia marina HOM05D002890 ORTHO05D005855 7.0e-40 172.2 994 25.7
TPR.G9950 Trifolium pratense HOM05D002890 ORTHO05D005855 1.2e-39 171.4 1051 25.1
HanXRQChr15g0470641 Helianthus annuus HOM05D002890 ORTHO05D005855 2.0e-39 170.6 565 26.7
CsaV3_3G002680 Cucumis sativus L. HOM05D002890 ORTHO05D005855 1.3e-38 167.9 830 27.6
CSS0042685 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D005855 2.9e-38 166.8 840 23.6
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 3.8e-38 166.4 1183 24.9
Sed0017963 Sechium edule HOM05D002890 ORTHO05D005855 5.0e-38 166.0 873 27.0
Solyc06g072270.4 Solanum lycopersicum HOM05D002890 ORTHO05D005855 4.3e-37 162.9 863 24.8
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 5.6e-37 162.5 970 24.8
HPP92_025073 Vanilla planifolia HOM05D002890 ORTHO05D005855 9.5e-37 161.8 180 44.4
ECA236G1013 Erigeron canadensis HOM05D002890 ORTHO05D005855 1.2e-36 161.4 190 44.7
Sopen06g028640 Solanum pennellii HOM05D002890 ORTHO05D005855 2.1e-36 160.6 863 25.6
MBI15_g03194_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D005855 4.7e-36 159.5 487 27.9
TAR629G0274 Trochodendron aralioides HOM05D002890 ORTHO05D005855 6.1e-36 159.1 852 26.5
Ciclev10010907m.g Citrus clementina HOM05D002890 ORTHO05D005855 8.0e-36 158.7 945 24.8
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 5.2e-35 156.0 625 27.2
VMungo0540G2163 Vigna mungo HOM05D002890 ORTHO05D005855 6.8e-35 155.6 863 24.0
MELO3C013937.2 Cucumis melo HOM05D002890 ORTHO05D005855 8.9e-35 155.2 1014 27.1
Nitab4.5_0001678g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.2e-34 154.8 177 42.9
CAN.G65.76 Capsicum annuum HOM05D002890 ORTHO05D005855 1.5e-34 154.5 986 24.5
PGR042G1125 Punica granatum HOM05D002890 ORTHO05D005855 2.0e-34 154.1 552 27.7
Actinidia36598 Actinidia chinensis HOM05D002890 ORTHO05D005855 2.6e-34 153.7 189 42.3
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 2.6e-34 153.7 618 27.2
Nitab4.5_0022153g0010 Nicotiana tabacum HOM05D002890 ORTHO05D005855 9.8e-34 151.8 177 42.9
DCAR_028200 Daucus carota HOM05D002890 ORTHO05D005855 1.3e-33 151.4 844 26.4
Cc09_g01670 Coffea canephora HOM05D002890 ORTHO05D005855 1.7e-33 151.0 233 39.1
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 2.2e-33 150.6 200 41.0
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 1.4e-32 147.9 856 26.4
Nitab4.5_0000033g0410 Nicotiana tabacum HOM05D002890 ORTHO05D005855 7.8e-31 142.1 206 37.9
AT1G64570 Arabidopsis thaliana HOM05D002890 ORTHO05D005855 1.3e-30 141.4 145 46.9
BcaC04g22581 Brassica carinata HOM05D002890 ORTHO05D007906 1.3e-30 141.4 145 46.9
AL2G10210 Arabidopsis lyrata HOM05D002890 ORTHO05D005855 1.7e-30 141.0 145 46.9
Thhalv10023221m.g Eutrema salsugineum HOM05D002890 ORTHO05D005855 3.0e-30 140.2 200 40.5
Zm00001eb310710 Zea mays HOM05D002890 ORTHO05D005855 3.9e-30 139.8 955 24.5
MD05G1346800 Malus domestica HOM05D002890 ORTHO05D005855 6.6e-30 139.0 915 24.3
A09p14580 Brassica napus HOM05D002890 ORTHO05D005855 1.5e-29 137.9 177 42.4
C09p17660 Brassica napus HOM05D002890 ORTHO05D005855 1.5e-29 137.9 177 42.4
BolC9t54660H Brassica oleracea HOM05D002890 ORTHO05D005855 1.5e-29 137.9 177 42.4
BraA09t37106Z Brassica rapa HOM05D002890 ORTHO05D005855 1.5e-29 137.9 177 42.4
SMO364G0505 Selaginella moellendorffii HOM05D002890 ORTHO05D005855 1.5e-29 137.9 773 25.4
Carub.0002s0019 Capsella rubella HOM05D002890 ORTHO05D005855 7.3e-29 135.6 145 45.5
ClCG10G002660 Citrullus lanatus HOM05D002890 ORTHO05D005855 9.5e-29 135.2 830 26.1
Sp2g00190 Schrenkiella parvula HOM05D002890 ORTHO05D005855 1.6e-28 134.4 180 40.6
CARHR046380 Cardamine hirsuta HOM05D002890 ORTHO05D005855 4.7e-28 132.9 177 42.9
Ah.06g183850 Amaranthus hybridus HOM05D002890 ORTHO05D005855 2.6e-26 127.1 855 26.7
SHI01979 Sapria himalayana HOM05D002890 ORTHO05D005855 3.4e-26 126.7 156 44.9
Aa31LG2G1570 Aethionema arabicum HOM05D002890 ORTHO05D005855 4.4e-26 126.3 215 35.8
Nitab4.5_0002954g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.7e-25 124.4 390 30.0
Peaxi162Scf00643g00544 Petunia axillaris HOM05D002890 ORTHO05D005855 8.3e-25 122.1 800 25.1
EL10Ac4g08116 Beta vulgaris HOM05D002890 ORTHO05D005855 3.2e-24 120.2 862 24.0
AUR62029351 Chenopodium quinoa HOM05D002890 ORTHO05D005855 4.1e-24 119.8 885 23.5
AUR62034232 Chenopodium quinoa HOM05D002890 ORTHO05D005855 4.3e-21 109.8 575 23.7
Nitab4.5_0001247g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 8.1e-20 105.5 164 36.0
RcHm_v2.0_Chr5g0003091 Rosa chinensis HOM05D002890 ORTHO05D005855 1.5e-18 101.3 450 25.3
Atru.chr10.2227 Acer truncatum HOM05D002890 ORTHO05D005855 2.4e-16 94.0 770 23.4
BcaC01g05870 Brassica carinata HOM05D002890 ORTHO05D005855 1.7e-14 87.8 97 46.4
C03p21570 Brassica napus HOM05D002890 ORTHO05D005855 6.6e-14 85.9 97 44.3
Actinidia10696 Actinidia chinensis HOM05D002890 ORTHO05D005855 1.9e-13 84.3 123 36.6
SHI02202 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-13 84.0 74 52.7
Oeu039345.1 Olea europaea HOM05D002890 ORTHO05D005855 2.8e-12 80.5 367 25.1
QL05p073153 Quercus lobata HOM05D002890 ORTHO05D005855 5.2e-11 76.3 72 48.6
Nn4g25681 Nelumbo nucifera HOM05D002890 ORTHO05D005855 2.0e-10 74.3 507 27.2
HPP92_025078 Vanilla planifolia HOM05D002890 ORTHO05D005855 2.0e-10 74.3 71 49.3
Lsat_1_v5_gn_7_16040 Lactuca sativa HOM05D002890 ORTHO05D005855 2.9e-09 70.5 360 27.8
Lj1P1230T41 Lonicera japonica HOM05D002890 ORTHO05D005855 4.2e-08 66.6 448 27.0
RcHm_v2.0_Chr5g0003031 Rosa chinensis HOM05D002890 ORTHO05D005855 3.5e-07 63.5 422 21.8
SGA_v2.0_scaffold25G10747 Striga asiatica HOM05D002890 ORTHO05D005855 4.6e-07 63.2 104 38.5
CiPaw.10G071000 Carya illinoinensis HOM05D002890 ORTHO05D005855 3.0e-06 60.5 65 55.4


User provided reference genes

Program Settings