Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g32010 Chara braunii HOM05D005761 ORTHO05D007286 1.7e-181 639.4 371 100.0
PSO063G2446 Papaver somniferum HOM05D005761 ORTHO05D007286 4.6e-30 136.3 148 48.0
AL1G27310 Arabidopsis lyrata HOM05D005761 ORTHO05D007286 7.9e-30 135.6 153 49.0
Mapoly0033s0089 Marchantia polymorpha HOM05D005761 ORTHO05D007286 7.9e-30 135.6 140 47.9
Carub.0001s1498 Capsella rubella HOM05D005761 ORTHO05D007286 1.3e-29 134.8 153 48.4
HPP92_024576 Vanilla planifolia HOM05D005761 ORTHO05D007286 3.0e-29 133.7 148 47.3
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 3.9e-29 133.3 153 47.1
CARHR015750 Cardamine hirsuta HOM05D005761 ORTHO05D007286 3.9e-29 133.3 154 46.8
Eucgr.F03043 Eucalyptus grandis HOM05D005761 ORTHO05D007286 3.9e-29 133.3 144 52.1
Lalb_Chr25g0280001 Lupinus albus HOM05D005761 ORTHO05D007286 6.7e-29 132.5 152 47.4
Thhalv10008971m.g Eutrema salsugineum HOM05D005761 ORTHO05D007286 8.7e-29 132.1 154 46.1
Cpa.g.sc33.106 Carica papaya HOM05D005761 ORTHO05D007286 1.1e-28 131.7 140 47.9
PSO170G4248 Papaver somniferum HOM05D005761 ORTHO05D007286 1.1e-28 131.7 148 45.9
Gohir.D05G131700 Gossypium hirsutum HOM05D005761 ORTHO05D007286 1.5e-28 131.3 140 50.0
Gorai.009G135400 Gossypium raimondii HOM05D005761 ORTHO05D007286 1.5e-28 131.3 140 50.0
Ciclev10022630m.g Citrus clementina HOM05D005761 ORTHO05D007286 1.9e-28 131.0 140 50.0
COL.COLO4_30441 Corchorus olitorius HOM05D005761 ORTHO05D007286 1.9e-28 131.0 140 48.6
Pp3c3_29950 Physcomitrium patens HOM05D005761 ORTHO05D007286 1.9e-28 131.0 150 46.7
ClCG09G001920 Citrullus lanatus HOM05D005761 ORTHO05D007286 2.5e-28 130.6 150 44.7
Hma1.2p1_1195F.1_g265890 Hydrangea macrophylla HOM05D005761 ORTHO05D007286 2.5e-28 130.6 156 46.2
TWI75G0371 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 2.5e-28 130.6 150 44.7
AT1G15220 Arabidopsis thaliana HOM05D005761 ORTHO05D007286 3.3e-28 130.2 153 47.1
Gohir.A05G132200 Gossypium hirsutum HOM05D005761 ORTHO05D007286 4.3e-28 129.8 140 49.3
TWI12G1054 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 4.3e-28 129.8 150 46.0
CAN.G438.30 Capsicum annuum HOM05D005761 ORTHO05D007286 5.7e-28 129.4 151 46.4
arahy.Tifrunner.gnm1.ann1.IDML3X Arachis hypogaea HOM05D005761 ORTHO05D007286 7.4e-28 129.0 150 45.3
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 9.7e-28 128.6 156 45.5
Duzib192G1004 Durio zibethinus HOM05D005761 ORTHO05D007286 9.7e-28 128.6 141 48.9
Sed0000486 Sechium edule HOM05D005761 ORTHO05D007286 9.7e-28 128.6 150 44.0
Solyc03g120610.3 Solanum lycopersicum HOM05D005761 ORTHO05D007286 9.7e-28 128.6 151 45.7
Sopen00g008190 Solanum pennellii HOM05D005761 ORTHO05D007286 9.7e-28 128.6 151 45.7
PGSC0003DMG401002548 Solanum tuberosum HOM05D005761 ORTHO05D007286 9.7e-28 128.6 151 46.4
Thecc.06G093100 Theobroma cacao HOM05D005761 ORTHO05D007286 9.7e-28 128.6 140 47.9
arahy.Tifrunner.gnm1.ann1.QAD112 Arachis hypogaea HOM05D005761 ORTHO05D007286 1.3e-27 128.3 151 45.7
Cc04_g07670 Coffea canephora HOM05D005761 ORTHO05D007286 1.3e-27 128.3 141 48.2
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 1.3e-27 128.3 161 44.7
MBI01_g30861_MAGBIO Magnolia biondii HOM05D005761 ORTHO05D007286 1.3e-27 128.3 142 49.3
Nn2g11672 Nelumbo nucifera HOM05D005761 ORTHO05D007286 1.3e-27 128.3 147 46.3
QL05p021523 Quercus lobata HOM05D005761 ORTHO05D007286 1.3e-27 128.3 150 45.3
Sabra01G0154700 Salix brachista HOM05D005761 ORTHO05D007286 1.3e-27 128.3 143 47.6
Atru.chr5.1334 Acer truncatum HOM05D005761 ORTHO05D007286 1.6e-27 127.9 141 46.1
A06p11220 Brassica napus HOM05D005761 ORTHO05D007286 1.6e-27 127.9 153 45.8
BraA06t24302Z Brassica rapa HOM05D005761 ORTHO05D007286 1.6e-27 127.9 153 45.8
Dinv38013 Davidia involucrata HOM05D005761 ORTHO05D007286 1.6e-27 127.9 140 48.6
HanXRQChr09g0275451 Helianthus annuus HOM05D005761 ORTHO05D007286 1.6e-27 127.9 142 49.3
Atru.chr5.1303 Acer truncatum HOM05D005761 ORTHO05D007286 2.2e-27 127.5 141 46.1
CSS0019454 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 2.2e-27 127.5 158 45.6
CSS0045926 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 2.2e-27 127.5 158 45.6
ECA232G2351 Erigeron canadensis HOM05D005761 ORTHO05D007286 2.2e-27 127.5 143 49.7
Nitab4.5_0001315g0120 Nicotiana tabacum HOM05D005761 ORTHO05D007286 2.2e-27 127.5 141 48.2
MELO3C016564.2 Cucumis melo HOM05D005761 ORTHO05D007286 2.8e-27 127.1 138 45.7
Lj5A57G74 Lonicera japonica HOM05D005761 ORTHO05D007286 2.8e-27 127.1 158 44.3
Nitab4.5_0006311g0030 Nicotiana tabacum HOM05D005761 ORTHO05D007286 2.8e-27 127.1 141 48.2
Sp1g13540 Schrenkiella parvula HOM05D005761 ORTHO05D007286 2.8e-27 127.1 154 45.5
Glyma.08G204400 Glycine max HOM05D005761 ORTHO05D007286 3.7e-27 126.7 140 48.6
Gohir.A10G081800 Gossypium hirsutum HOM05D005761 ORTHO05D007286 3.7e-27 126.7 140 46.4
MD17G1190700 Malus domestica HOM05D005761 ORTHO05D007286 3.7e-27 126.7 155 47.1
Manes.04G130300 Manihot esculenta HOM05D005761 ORTHO05D007286 3.7e-27 126.7 141 46.8
Rhsim08G0224400 Rhododendron simsii HOM05D005761 ORTHO05D007286 3.7e-27 126.7 157 45.2
SGA_v2.0_scaffold5G02550 Striga asiatica HOM05D005761 ORTHO05D007286 3.7e-27 126.7 154 46.8
THA.LOC104813554 Tarenaya hassleriana HOM05D005761 ORTHO05D007286 3.7e-27 126.7 149 45.0
FAN05G4602 Fragaria x ananassa HOM05D005761 ORTHO05D007286 4.8e-27 126.3 139 47.5
Gohir.D10G069650 Gossypium hirsutum HOM05D005761 ORTHO05D007286 4.8e-27 126.3 141 46.8
Nitab4.5_0007217g0020 Nicotiana tabacum HOM05D005761 ORTHO05D007286 4.8e-27 126.3 141 47.5
Prupe.6G357100 Prunus persica HOM05D005761 ORTHO05D007286 4.8e-27 126.3 140 47.9
FAN09G1691 Fragaria x ananassa HOM05D005761 ORTHO05D007286 6.3e-27 125.9 139 47.5
Gorai.011G073900 Gossypium raimondii HOM05D005761 ORTHO05D007286 6.3e-27 125.9 141 46.8
PGR102G2101 Punica granatum HOM05D005761 ORTHO05D007286 6.3e-27 125.9 141 48.9
RcHm_v2.0_Chr2g0139151 Rosa chinensis HOM05D005761 ORTHO05D007286 6.3e-27 125.9 141 47.5
unitig_37.g12255 Utricularia gibba HOM05D005761 ORTHO05D007286 6.3e-27 125.9 151 46.4
A08p31680 Brassica napus HOM05D005761 ORTHO05D007286 8.2e-27 125.6 153 45.1
C08p17060 Brassica napus HOM05D000103 ORTHO05D000049 8.2e-27 125.6 153 44.4
BolC8t49332H Brassica oleracea HOM05D005761 ORTHO05D007286 8.2e-27 125.6 153 44.4
BraA08t35090Z Brassica rapa HOM05D005761 ORTHO05D007286 8.2e-27 125.6 153 45.1
CsaV3_3G005910 Cucumis sativus L. HOM05D005761 ORTHO05D007286 8.2e-27 125.6 150 43.3
ClCG10G006430 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.1e-26 125.2 140 45.7
FvH4_6g31840 Fragaria vesca HOM05D005761 ORTHO05D007286 1.1e-26 125.2 139 46.8
FAN14G3194 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.1e-26 125.2 139 46.8
Lsat_1_v5_gn_4_103261 Lactuca sativa HOM05D005761 ORTHO05D007286 1.1e-26 125.2 142 48.6
SGA_v2.0_scaffold80G25854 Striga asiatica HOM05D005761 ORTHO05D007286 1.1e-26 125.2 151 45.7
Potri.003G052000 Populus trichocarpa HOM05D005761 ORTHO05D007286 1.4e-26 124.8 151 44.4
vmacro18882 Vaccinium macrocarpon HOM05D005761 ORTHO05D007286 1.4e-26 124.8 149 45.6
Lj3g0012819 Lotus japonicus HOM05D005761 ORTHO05D007286 1.8e-26 124.4 140 47.1
Peaxi162Scf00015g00136 Petunia axillaris HOM05D005761 ORTHO05D007286 1.8e-26 124.4 139 46.8
GSVIVG01017058001 Vitis vinifera HOM05D005761 ORTHO05D007286 1.8e-26 124.4 141 47.5
MSTRG.22659 Avicennia marina HOM05D005761 ORTHO05D007286 2.4e-26 124.0 141 46.8
BcaC07g38774 Brassica carinata HOM05D005761 ORTHO05D007286 2.4e-26 124.0 138 46.4
DCAR_023065 Daucus carota HOM05D005761 ORTHO05D007286 2.4e-26 124.0 143 46.9
Migut.I00937 Erythranthe guttata HOM05D005761 ORTHO05D007286 2.4e-26 124.0 142 48.6
Nn3g18106 Nelumbo nucifera HOM05D005761 ORTHO05D007286 2.4e-26 124.0 148 45.3
EL10Ac9g22057 Beta vulgaris HOM05D005761 ORTHO05D007286 3.1e-26 123.6 141 46.1
Haze_16351 Corylus avellana HOM05D005761 ORTHO05D007286 3.1e-26 123.6 141 46.8
C05p13350 Brassica napus HOM05D005761 ORTHO05D007286 4.1e-26 123.2 137 47.4
Cpa.g.sc37.42 Carica papaya HOM05D005761 ORTHO05D007286 4.1e-26 123.2 145 45.5
Cfa014791 Carpinus fangiana HOM05D005761 ORTHO05D007286 4.1e-26 123.2 138 48.6
Ca_06670_v3 Cicer arietinum L. HOM05D005761 ORTHO05D007286 4.1e-26 123.2 130 46.2
Psat2g181000 Pisum sativum HOM05D005761 ORTHO05D007286 4.1e-26 123.2 141 45.4
PGR102G0188 Punica granatum HOM05D005761 ORTHO05D007286 4.1e-26 123.2 141 48.2
BolC5t30072H Brassica oleracea HOM05D005761 ORTHO05D007286 5.3e-26 122.9 137 47.4
CDE05G3104 Ceratophyllum demersum HOM05D005761 ORTHO05D007286 5.3e-26 122.9 150 45.3
DCAR_016208 Daucus carota HOM05D005761 ORTHO05D007286 6.9e-26 122.5 144 44.4
ATR0315G131 Amborella trichopoda HOM05D005761 ORTHO05D007286 9.1e-26 122.1 150 46.0
Cfa002100 Carpinus fangiana HOM05D005761 ORTHO05D001133 1.2e-25 121.7 138 47.1
AUR62016504 Chenopodium quinoa HOM05D005761 ORTHO05D007286 1.2e-25 121.7 137 46.0
Zm00001eb237310 Zea mays HOM05D005761 ORTHO05D007286 1.2e-25 121.7 144 45.1
Sc12g0009490 Simmondsia chinensis HOM05D005761 ORTHO05D007286 1.5e-25 121.3 145 45.5
VMungo0464G1667 Vigna mungo HOM05D005761 ORTHO05D007286 1.5e-25 121.3 140 47.1
Rhsim09G0202300 Rhododendron simsii HOM05D005761 ORTHO05D007286 3.4e-25 120.2 147 44.9
Ah.01g005570 Amaranthus hybridus HOM05D005761 ORTHO05D001133 7.7e-25 119.0 165 41.8
Medtr5g011180 Medicago truncatula HOM05D005761 ORTHO05D007286 7.7e-25 119.0 141 43.3
Phvul.010G148400 Phaseolus vulgaris HOM05D005761 ORTHO05D007286 1.0e-24 118.6 140 45.7
TAR624G1072 Trochodendron aralioides HOM05D005761 ORTHO05D007286 1.0e-24 118.6 141 46.1
Oeu000460.1 Olea europaea HOM05D005761 ORTHO05D007286 1.3e-24 118.2 142 45.1
Os02g0275100 Oryza sativa ssp. japonica HOM05D005761 ORTHO05D007286 1.3e-24 118.2 137 44.5
TPR.G19588 Trifolium pratense HOM05D005761 ORTHO05D007286 1.3e-24 118.2 123 47.2
CiPaw.01G235200 Carya illinoinensis HOM05D005761 ORTHO05D007286 1.7e-24 117.9 142 45.1
Peaxi162Scf00029g02413 Petunia axillaris HOM05D005761 ORTHO05D007286 1.1e-23 115.2 160 42.5
Oeu059462.1 Olea europaea HOM05D005761 ORTHO05D007286 1.9e-23 114.4 164 42.1
TAR636G0897 Trochodendron aralioides HOM05D005761 ORTHO05D007286 1.9e-23 114.4 101 55.4
RcHm_v2.0_Chr2g0139101 Rosa chinensis HOM05D005761 ORTHO05D007286 2.5e-23 114.0 142 45.1
SEGI_40479 Sequoiadendron giganteum HOM05D005761 ORTHO05D007286 5.5e-23 112.8 131 48.9
Glyma.07G019200 Glycine max HOM05D005761 ORTHO05D007286 2.7e-22 110.5 89 59.6
SalBow2G2609 Salvia bowleyana HOM05D005761 ORTHO05D007286 3.6e-22 110.2 195 37.4
CANSAT56G0921 Cannabis sativa HOM05D005761 ORTHO05D007286 2.6e-20 104.0 134 40.3
HanXRQChr05g0136521 Helianthus annuus HOM05D005761 ORTHO05D007286 6.3e-19 99.4 91 51.6
BcaC05g25451 Brassica carinata HOM05D005761 ORTHO05D007286 1.8e-18 97.8 120 45.0
HanXRQChr10g0301331 Helianthus annuus HOM05D005761 ORTHO05D007286 2.9e-16 90.5 85 51.8
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 1.9e-15 87.8 264 31.4
Duzib160G0104 Durio zibethinus HOM05D005761 ORTHO05D007286 1.9e-15 87.8 139 38.1
SHI11001 Sapria himalayana HOM05D005761 ORTHO05D007286 3.2e-15 87.0 147 36.1
Cfa014792 Carpinus fangiana HOM05D005761 ORTHO05D007286 2.6e-12 77.4 95 44.2
Sed0020064 Sechium edule HOM05D005761 ORTHO05D007286 8.0e-06 55.8 98 37.8


User provided reference genes

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